Gene: Solyc11g005580.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g005580.1
  • Transcript Identifier Solyc11g005580.1.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 446612-449964 : positive

Gene Family Information

  • ID HOM05D006898
  • #Genes/#Species 117/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g005580.1.1
  • uniprot K4D4H1
  • gene_id Solyc11g005580

Descriptions

  • Description Ribosomal RNA small subunit methyltransferase H (AHRD V3.3 *** A0A200QZ92_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0070475
IBA
GOA DatabaserRNA base methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0071424
IBA
GOA DatabaserRNA (cytosine-N4-)-methyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G10910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR002903 Ribosomal RNA small subunit methyltransferase H
Mapman id Description
16.11.3.2.1 RNA processing.organelle machinery.RNA modification.rRNA methylation.rRNA methyltransferase (CMAL)