Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 2.0e-209 732.3 386 100.0
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 6.7e-189 664.1 390 90.5
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 2.0e-185 652.5 391 89.8
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 5.1e-181 637.9 390 86.9
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 4.3e-180 634.8 387 87.3
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 1.0e-176 623.6 389 87.7
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 4.9e-176 621.3 392 86.7
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 8.4e-176 620.5 389 86.9
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 1.1e-172 610.1 392 85.2
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 1.1e-172 610.1 392 85.2
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 4.3e-172 608.2 390 86.4
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.4e-170 603.2 403 81.1
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 4.2e-167 591.7 390 84.1
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 1.6e-166 589.7 390 84.1
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 1.3e-165 586.6 386 80.3
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 8.5e-152 540.8 392 77.8
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 3.1e-146 522.3 309 90.6
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 5.2e-133 478.4 385 68.6
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 2.0e-132 476.5 382 69.1
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 2.6e-132 476.1 384 68.8
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 1.8e-130 469.9 382 68.1
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 2.4e-130 469.5 337 73.9
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 2.7e-129 466.1 388 68.0
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 2.7e-129 466.1 388 68.6
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 4.5e-129 465.3 386 66.8
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 4.5e-129 465.3 381 65.9
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 1.0e-128 464.2 383 67.9
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 2.3e-128 463.0 388 66.5
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.3e-128 463.0 328 74.4
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 3.8e-128 462.2 382 70.2
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 1.1e-127 460.7 382 67.3
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.9e-127 459.9 382 67.3
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 9.5e-127 457.6 382 66.8
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.2e-126 457.2 393 65.4
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 6.1e-126 454.9 339 72.6
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 1.0e-125 454.1 370 67.8
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 1.0e-125 454.1 388 65.2
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 1.8e-125 453.4 388 64.2
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 5.2e-125 451.8 385 66.8
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 1.2e-124 450.7 385 66.0
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 2.0e-124 449.9 384 65.1
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 2.6e-124 449.5 346 70.5
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 7.5e-124 448.0 384 66.1
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.5e-124 448.0 384 66.1
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 9.8e-124 447.6 362 69.3
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 1.7e-123 446.8 381 66.7
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 3.7e-123 445.7 270 84.8
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 4.9e-123 445.3 382 65.7
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.4e-122 443.7 382 65.7
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 3.1e-122 442.6 406 62.3
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.4e-122 441.8 382 65.4
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 9.2e-122 441.0 388 64.7
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 3.5e-121 439.1 384 64.3
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 1.0e-120 437.6 403 63.3
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 8.6e-120 434.5 341 69.8
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 1.5e-119 433.7 384 63.5
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.9e-119 433.3 384 64.3
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 1.9e-119 433.3 388 64.4
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 9.5e-119 431.0 327 72.2
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.2e-118 430.6 306 74.5
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 1.2e-118 430.6 383 64.2
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 2.1e-118 429.9 385 63.1
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 3.6e-118 429.1 321 70.7
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 6.1e-118 428.3 370 64.3
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 1.0e-117 427.6 270 81.1
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.8e-117 426.8 345 68.4
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.8e-117 426.8 347 68.0
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 3.0e-117 426.0 384 63.0
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 3.0e-117 426.0 384 63.8
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 5.2e-117 425.2 349 67.9
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 8.9e-117 424.5 296 76.4
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 8.9e-117 424.5 331 71.0
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.5e-116 423.7 381 63.8
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 7.5e-116 421.4 258 82.9
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 9.8e-116 421.0 345 67.8
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 1.3e-115 420.6 282 76.6
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 3.7e-115 419.1 340 68.2
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 1.2e-113 414.1 386 63.5
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 1.6e-113 413.7 316 69.6
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 1.3e-112 410.6 334 69.5
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 1.2e-108 397.5 322 67.1
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 1.7e-107 393.7 320 68.1
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 1.9e-106 390.2 318 67.0
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 2.4e-106 389.8 358 61.2
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 7.0e-106 388.3 319 66.5
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.7e-104 383.6 329 62.0
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 1.9e-103 380.2 327 62.1
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 8.1e-102 374.8 320 65.3
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 6.8e-101 371.7 236 80.9
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 1.5e-100 370.5 313 64.5
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.3e-99 367.5 340 61.2
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 3.7e-99 365.9 380 56.3
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 4.9e-99 365.5 505 47.5
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 3.2e-98 362.8 510 46.7
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 3.2e-98 362.8 327 64.5
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 1.3e-96 357.5 300 66.0
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 3.9e-96 355.9 271 67.9
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 7.3e-95 351.7 354 60.2
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 1.2e-94 350.9 274 67.5
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 1.8e-93 347.1 288 63.2
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.2e-92 344.4 303 66.7
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 3.8e-91 339.3 247 71.7
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 7.1e-90 335.1 205 83.4
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 1.1e-85 321.2 210 76.7
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 2.9e-83 313.2 423 49.6
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 1.2e-81 307.8 310 61.3
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 1.6e-78 297.4 176 87.5
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.2e-75 287.0 400 48.5
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.4e-74 284.3 263 57.4
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 1.4e-74 284.3 263 57.4
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 1.2e-73 281.2 264 60.2
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.0e-72 278.1 263 59.3
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 9.0e-69 265.0 258 56.2
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.3e-67 261.2 188 70.7
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 1.3e-64 251.1 277 52.7
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 3.9e-64 249.6 157 80.3
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.4e-61 240.4 264 51.1
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.3e-54 218.0 129 86.0
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 5.3e-53 212.6 130 82.3
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.5e-50 203.8 138 75.4
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 1.3e-46 191.4 114 89.5
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 9.4e-42 175.3 105 81.0
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 8.8e-40 168.7 251 39.4
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 5.5e-26 122.9 179 41.3
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-25 121.3 187 38.0
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 1.8e-24 117.9 82 76.8
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 1.2e-23 115.2 90 67.8
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.8e-14 84.0 155 40.0
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 7.7e-12 75.9 41 95.1
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 7.7e-12 75.9 38 97.4
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 6.1e-09 66.2 55 58.2
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 3.0e-08 63.9 319 24.8
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 4.0e-08 63.5 36 86.1


User provided reference genes

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