Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 2.1e-254 882.5 686 100.0
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 4.9e-227 791.6 479 92.7
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 5.1e-224 781.6 686 91.5
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 1.2e-212 743.8 686 85.9
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 7.1e-210 734.6 484 87.4
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 3.5e-201 705.7 482 85.7
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 7.9e-201 704.5 481 84.2
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 3.0e-192 676.0 486 77.0
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 2.7e-177 626.3 486 78.2
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 2.7e-177 626.3 486 78.2
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 8.8e-176 621.3 486 77.6
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 7.0e-173 611.7 485 75.7
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 4.5e-172 609.0 486 76.1
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 5.9e-172 608.6 486 76.1
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 6.6e-139 498.8 486 59.3
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.9e-138 497.3 539 58.3
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 2.1e-137 493.8 519 60.5
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 6.8e-136 488.8 511 61.6
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 1.4e-133 481.1 503 62.6
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 9.2e-133 478.4 513 60.0
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 2.0e-132 477.2 517 58.6
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.6e-132 476.1 506 62.3
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 4.6e-132 476.1 506 62.3
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 5.0e-131 472.6 507 61.9
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 1.1e-130 471.5 524 58.8
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.1e-130 471.5 524 58.8
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 3.3e-130 469.9 529 58.0
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 4.3e-130 469.5 522 47.9
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 2.8e-129 466.8 510 59.8
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 2.8e-129 466.8 510 62.0
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 3.6e-129 466.5 527 58.4
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.1e-128 464.9 435 54.9
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.2e-127 461.5 445 66.1
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 7.5e-127 458.8 521 57.6
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 2.9e-126 456.8 523 57.7
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 2.9e-126 456.8 518 56.8
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 2.4e-125 453.8 509 59.1
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 1.6e-124 451.1 517 56.9
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 2.7e-124 450.3 492 59.3
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 3.5e-124 449.9 527 56.2
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.0e-123 448.4 465 61.7
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 3.6e-121 439.9 422 53.8
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 8.1e-121 438.7 545 54.9
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 6.8e-120 435.6 534 53.7
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 2.0e-119 434.1 514 55.8
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 3.4e-119 433.3 409 65.8
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 9.9e-119 431.8 391 67.0
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.2e-118 430.6 407 63.4
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.2e-118 430.6 517 56.3
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.8e-118 429.9 520 54.8
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.9e-118 429.5 358 71.5
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 6.4e-118 429.1 409 59.9
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 8.4e-118 428.7 516 53.1
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.1e-117 428.3 385 69.4
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 2.4e-117 427.2 518 56.8
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 9.2e-117 425.2 518 54.6
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 1.2e-116 424.9 439 61.3
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.1e-116 424.1 409 64.5
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 6.0e-116 422.5 520 54.4
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 1.7e-115 421.0 430 60.0
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 2.3e-115 420.6 411 65.2
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 3.0e-115 420.2 436 60.3
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 5.1e-115 419.5 391 65.5
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.1e-114 418.3 434 61.3
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.5e-114 417.9 536 55.2
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 4.3e-114 416.4 385 65.5
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 4.7e-113 412.9 436 59.4
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 6.2e-113 412.5 514 54.3
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 2.4e-112 410.6 353 71.7
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 4.0e-112 409.8 524 54.2
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 9.0e-112 408.7 352 69.6
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.2e-111 408.3 539 54.0
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 4.4e-111 406.4 353 67.7
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 2.9e-110 403.7 441 60.1
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 8.4e-110 402.1 326 77.0
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.4e-109 401.4 412 61.4
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 1.9e-109 401.0 498 52.6
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 7.1e-109 399.1 360 55.8
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 9.3e-109 398.7 349 68.8
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.5e-108 396.7 517 51.6
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 6.0e-108 396.0 435 58.2
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.0e-107 395.2 534 51.9
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.0e-107 395.2 534 51.9
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 3.0e-107 393.7 518 44.8
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.1e-106 391.7 359 67.4
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 7.3e-106 389.0 513 51.9
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 4.8e-105 386.3 317 73.5
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 2.4e-104 384.0 325 72.3
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 2.4e-104 384.0 359 65.7
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 5.8e-103 379.4 390 63.6
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 7.6e-103 379.0 513 50.9
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 9.9e-103 378.6 317 71.3
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.4e-101 374.8 359 64.3
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 4.2e-101 373.2 390 63.1
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 5.4e-101 372.9 303 75.6
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 2.1e-100 370.9 359 64.3
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 3.0e-99 367.1 359 62.4
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 5.6e-98 362.8 359 65.2
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.1e-97 360.9 344 63.4
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 2.1e-97 360.9 355 62.5
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.3e-94 351.7 380 62.6
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 1.6e-89 334.7 361 60.7
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 2.2e-65 254.6 189 64.0
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.8e-59 235.0 276 44.9
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.2e-54 218.0 200 55.0
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.0e-51 209.1 326 41.4
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 3.1e-40 171.0 392 34.9
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 6.8e-35 153.3 368 40.2
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 4.0e-27 127.5 417 35.7
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.2e-26 125.9 220 54.1
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 3.2e-24 117.9 129 49.6
AT5G14350 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 3.0e-22 111.3 125 54.4
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 1.2e-18 99.4 154 37.7
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 3.0e-14 84.7 48 72.9
Sc13g0001690 Simmondsia chinensis HOM05D006106 ORTHO05D007662 7.8e-07 60.1 135 26.7


User provided reference genes

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