Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g22190 Schrenkiella parvula HOM05D004188 ORTHO05D004445 5.2e-50 201.1 126 100.0
BcaB01g04664 Brassica carinata HOM05D004188 ORTHO05D004445 2.6e-25 119.0 140 57.9
Thhalv10015987m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 2.3e-21 105.9 136 55.9
Carub.0008s2131 Capsella rubella HOM05D004188 ORTHO05D004445 1.2e-17 93.6 129 48.8
C03p12760 Brassica napus HOM05D004188 ORTHO05D004445 5.8e-17 91.3 139 47.5
BolC3t13742H Brassica oleracea HOM05D004188 ORTHO05D004445 9.9e-17 90.5 137 47.4
AL8G37220 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 1.3e-16 90.1 141 58.9
AT5G60630 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 5.4e-15 84.7 140 47.9
A03p11070 Brassica napus HOM05D004188 ORTHO05D004445 5.4e-15 84.7 137 45.3
BraA03t10421Z Brassica rapa HOM05D004188 ORTHO05D004445 5.4e-15 84.7 137 45.3
BcaB08g36360 Brassica carinata HOM05D004188 ORTHO05D004445 4.3e-12 75.1 52 73.1
A10p17820 Brassica napus HOM05D004188 ORTHO05D004445 5.6e-12 74.7 132 40.9
C09p53350 Brassica napus HOM05D004188 ORTHO05D004445 2.8e-11 72.4 52 71.2
BraA10t43861Z Brassica rapa HOM05D004188 ORTHO05D004445 2.8e-11 72.4 132 40.2
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 1.2e-09 67.0 182 39.6
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 2.6e-09 65.9 115 53.0
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 3.4e-09 65.5 120 44.2
BcaC04g19723 Brassica carinata HOM05D004188 ORTHO05D004445 7.6e-09 64.3 126 39.7
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 1.3e-08 63.5 115 41.7
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 2.2e-08 62.8 49 65.3
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 3.8e-08 62.0 47 66.0
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 6.4e-08 61.2 176 36.9
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 8.4e-08 60.8 155 43.2
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 1.1e-07 60.5 53 56.6
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 1.1e-07 60.5 47 61.7
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.4e-07 60.1 53 60.4
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 1.9e-07 59.7 127 50.4
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 1.9e-07 59.7 53 60.4
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 2.4e-07 59.3 64 48.4
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 2.4e-07 59.3 49 57.1
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 3.2e-07 58.9 48 56.2
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 3.2e-07 58.9 59 55.9
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 4.2e-07 58.5 148 40.5
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 5.5e-07 58.2 48 58.3
Nitab4.5_0012712g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 5.5e-07 58.2 113 48.7
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 7.1e-07 57.8 46 60.9
CsaV3_6G013900 Cucumis sativus L. HOM05D004188 ORTHO05D004445 7.1e-07 57.8 66 48.5
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 9.3e-07 57.4 115 40.0
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 9.3e-07 57.4 115 40.0
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 9.3e-07 57.4 115 40.0
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 1.2e-06 57.0 59 54.2
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.2e-06 57.0 46 60.9
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 1.6e-06 56.6 42 69.0
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.1e-06 56.2 155 32.3
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 2.7e-06 55.8 64 50.0
Zm00001eb064740 Zea mays HOM05D004188 ORTHO05D004445 2.7e-06 55.8 47 57.4
Aa31LG4G14540 Aethionema arabicum HOM05D004188 ORTHO05D004445 3.5e-06 55.5 48 58.3
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 4.6e-06 55.1 48 62.5
Dinv31327 Davidia involucrata HOM05D001979 ORTHO05D001961 4.6e-06 55.1 42 64.3
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 4.6e-06 55.1 155 32.3
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 4.6e-06 55.1 40 62.5
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 6.0e-06 54.7 56 55.4
THA.LOC104810856 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 6.0e-06 54.7 42 66.7
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 7.9e-06 54.3 106 34.0
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 7.9e-06 54.3 45 57.8


User provided reference genes

Program Settings