Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g16360 Schrenkiella parvula HOM05D016277 ORTHO05D014491 4.8e-233 810.8 423 100.0
BcaB01g04293 Brassica carinata HOM05D016277 ORTHO05D014491 9.8e-77 291.6 382 47.9
BcaC01g06303 Brassica carinata HOM05D016277 ORTHO05D014491 1.4e-59 234.6 382 46.1
BraA03t10760Z Brassica rapa HOM05D016277 ORTHO05D014491 3.5e-58 229.9 382 45.5
A03p14690 Brassica napus HOM05D016277 ORTHO05D014491 6.0e-58 229.2 378 45.8
BolC3t14131H Brassica oleracea HOM05D016277 ORTHO05D014491 6.0e-58 229.2 383 46.0
C03p17170 Brassica napus HOM05D016277 ORTHO05D014491 1.1e-54 218.4 382 44.8
Thhalv10015921m.g Eutrema salsugineum HOM05D016277 ORTHO05D014491 2.7e-42 177.2 395 37.7
C02p17120 Brassica napus HOM05D021249 ORTHO05D014491 3.3e-40 170.2 437 34.8
BcaB05g22128 Brassica carinata HOM05D021249 ORTHO05D014491 5.6e-40 169.5 332 40.4
BolC2t07812H Brassica oleracea HOM05D021249 ORTHO05D014491 1.6e-39 167.9 437 34.6
A02p10390 Brassica napus HOM05D021249 ORTHO05D014491 1.3e-36 158.3 435 34.0
BraA02t06105Z Brassica rapa HOM05D021249 ORTHO05D014491 1.7e-36 157.9 434 34.1
BcaC03g14348 Brassica carinata HOM05D021249 ORTHO05D014491 1.2e-34 151.8 448 33.3
AL6G39050 Arabidopsis lyrata HOM05D008496 ORTHO05D010729 5.7e-16 89.7 247 34.0
AT5G27880 Arabidopsis thaliana HOM05D008496 ORTHO05D010729 7.4e-16 89.4 184 38.6
Carub.0006s2470 Capsella rubella HOM05D008496 ORTHO05D010729 1.3e-15 88.6 198 36.9
CARHR183000 Cardamine hirsuta HOM05D008496 ORTHO05D010729 4.8e-15 86.7 201 34.3
AT5G54340 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 1.8e-14 84.7 390 28.5
AT5G54360 Arabidopsis thaliana HOM05D017374 ORTHO05D018424 6.9e-14 82.8 206 34.5
Sp2g21000 Schrenkiella parvula HOM05D008496 ORTHO05D010729 2.0e-13 81.3 197 33.0
CARHR186360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 4.5e-13 80.1 212 33.5
Thhalv10005521m.g Eutrema salsugineum HOM05D008496 ORTHO05D010729 2.2e-12 77.8 167 34.7
CARHR292330 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.8e-12 77.0 184 33.7
AL8G29770 Arabidopsis lyrata HOM05D017374 ORTHO05D018424 8.5e-12 75.9 188 31.4
BcaNung04743 Brassica carinata HOM05D008496 ORTHO05D010729 2.7e-10 70.9 134 39.6
A06p37240 Brassica napus HOM05D008496 ORTHO05D010729 6.1e-10 69.7 210 32.9
BraA06t26648Z Brassica rapa HOM05D008496 ORTHO05D010729 6.1e-10 69.7 210 32.9
C07p41230 Brassica napus HOM05D008496 ORTHO05D010729 1.8e-09 68.2 191 33.5
BolC7t44648H Brassica oleracea HOM05D008496 ORTHO05D010729 1.8e-09 68.2 191 33.5
CARHR292220 Cardamine hirsuta HOM05D008496 ORTHO05D010729 1.1e-08 65.5 212 30.2
CARHR266170 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.3e-08 63.9 216 31.0
CARHR182960 Cardamine hirsuta HOM05D008496 ORTHO05D010729 5.7e-08 63.2 187 31.6
BcaB04g19693 Brassica carinata HOM05D008496 ORTHO05D010729 3.1e-06 57.4 154 33.1
CARHR289360 Cardamine hirsuta HOM05D008496 ORTHO05D010729 3.1e-06 57.4 108 36.1
BcaC04g23648 Brassica carinata HOM05D008496 ORTHO05D010729 4.1e-06 57.0 111 35.1
A09p05480 Brassica napus HOM05D008496 ORTHO05D010729 5.3e-06 56.6 193 29.5
BraA09t36186Z Brassica rapa HOM05D008496 ORTHO05D010729 5.3e-06 56.6 193 29.5
C09p05960 Brassica napus HOM05D008496 ORTHO05D010729 7.0e-06 56.2 110 35.5
BolC9t53521H Brassica oleracea HOM05D008496 ORTHO05D010729 7.0e-06 56.2 110 35.5


User provided reference genes

Program Settings