Gene: AT5G54360
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G54360
- Transcript Identifier AT5G54360.1
- Gene Type Coding gene
- Location Chr5 : 22071862-22072674 : positive
Gene Family Information
- ID HOM05D017374
- #Genes/#Species 8/3
- Phylogenetic origin
- ID ORTHO05D018424
- #Genes/#Species 8/3
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT5G54360.1
- uniprot Q9FL64
Descriptions
- Description C2H2-like zinc finger protein
- Computational description C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular, chloroplast; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISM | Gene Ontology | chloroplast |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
No InterPro domains detected for this gene.
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |