Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g14520 Schrenkiella parvula HOM05D002326 ORTHO05D009991 6.1e-43 177.2 95 100.0
A03p15750 Brassica napus HOM05D002326 ORTHO05D009991 2.1e-35 152.1 96 86.5
BraA03t10865Z Brassica rapa HOM05D002326 ORTHO05D009991 2.1e-35 152.1 96 86.5
AL8G26650 Arabidopsis lyrata HOM05D002326 ORTHO05D009991 2.8e-32 141.7 96 83.3
AT5G52270 Arabidopsis thaliana HOM05D002326 ORTHO05D009991 8.2e-32 140.2 96 82.3
THA.LOC104811984 Tarenaya hassleriana HOM05D002326 ORTHO05D009991 1.7e-24 115.9 99 63.6
Medtr1g100663 Medicago truncatula HOM05D002326 ORTHO05D009991 1.0e-18 96.7 94 50.0
CANSAT21G1054 Cannabis sativa HOM05D002326 ORTHO05D009991 3.0e-18 95.1 97 55.7
QL09p014305 Quercus lobata HOM05D002326 ORTHO05D009991 8.8e-18 93.6 93 53.8
TAR629G2810 Trochodendron aralioides HOM05D002326 ORTHO05D009991 1.5e-17 92.8 95 50.5
Manes.14G026200 Manihot esculenta HOM05D002326 ORTHO05D009991 5.7e-17 90.9 93 50.5
Prupe.2G293800 Prunus persica HOM05D002326 ORTHO05D009991 5.7e-17 90.9 90 53.3
Gorai.008G277800 Gossypium raimondii HOM05D002326 ORTHO05D009991 9.8e-17 90.1 98 52.0
arahy.Tifrunner.gnm1.ann1.HN068X Arachis hypogaea HOM05D002326 ORTHO05D009991 1.7e-16 89.4 95 48.4
Gohir.A12G258100 Gossypium hirsutum HOM05D002326 ORTHO05D009991 1.7e-16 89.4 98 52.0
Thecc.03G175900 Theobroma cacao HOM05D002326 ORTHO05D009991 1.7e-16 89.4 95 54.7
Duzib205G0502 Durio zibethinus HOM05D002326 ORTHO05D009991 2.2e-16 89.0 94 53.2
Glyma.20G158000 Glycine max HOM05D002326 ORTHO05D009991 2.2e-16 89.0 92 52.2
Gohir.D12G259400 Gossypium hirsutum HOM05D002326 ORTHO05D009991 2.8e-16 88.6 98 51.0
Sabra12G0105500 Salix brachista HOM05D002326 ORTHO05D009991 2.8e-16 88.6 93 50.5
Ciclev10005834m.g Citrus clementina HOM05D002326 ORTHO05D009991 3.7e-16 88.2 93 49.5
Rhsim09G0197600 Rhododendron simsii HOM05D002326 ORTHO05D009991 3.7e-16 88.2 93 50.5
CiPaw.04G070600 Carya illinoinensis HOM05D002326 ORTHO05D009991 6.3e-16 87.4 98 50.0
Psat6g199720 Pisum sativum HOM05D002326 ORTHO05D009991 8.3e-16 87.0 92 50.0
MD07G1268100 Malus domestica HOM05D002326 ORTHO05D009991 1.1e-15 86.7 91 51.6
Nn1g01445 Nelumbo nucifera HOM05D002326 ORTHO05D009991 2.4e-15 85.5 93 48.4
vmacro09839 Vaccinium macrocarpon HOM05D002326 ORTHO05D009991 4.1e-15 84.7 94 51.1
TPR.G14334 Trifolium pratense HOM05D002326 ORTHO05D009991 5.4e-15 84.3 96 44.8
CSS0028867 Camellia sinensis var. sinensis HOM05D002326 ORTHO05D009991 3.5e-14 81.6 93 43.0
Atru.chr1.463 Acer truncatum HOM05D002326 ORTHO05D009991 7.7e-14 80.5 93 49.5
Solyc03g025860.3 Solanum lycopersicum HOM05D002326 ORTHO05D009991 1.0e-13 80.1 90 48.9
Sopen03g004670 Solanum pennellii HOM05D002326 ORTHO05D009991 2.3e-13 79.0 90 48.9
PGSC0003DMG400014338 Solanum tuberosum HOM05D002326 ORTHO05D009991 2.3e-13 79.0 90 48.9
Peaxi162Scf01464g00025 Petunia axillaris HOM05D002326 ORTHO05D009991 6.5e-13 77.4 90 47.8
Aa31LG3G8680 Aethionema arabicum HOM05D002326 ORTHO05D009991 1.1e-12 76.6 62 69.4
arahy.Tifrunner.gnm1.ann1.YG2WAC Arachis hypogaea HOM05D002326 ORTHO05D009991 9.5e-12 73.6 85 48.2
Nitab4.5_0000716g0080 Nicotiana tabacum HOM05D002326 ORTHO05D009991 2.1e-11 72.4 90 47.8
PSO478G3962 Papaver somniferum HOM05D002326 ORTHO05D009991 4.7e-11 71.2 88 47.7
Thhalv10015442m.g Eutrema salsugineum HOM05D002326 ORTHO05D009991 8.0e-11 70.5 38 94.7
C03p18420 Brassica napus HOM05D002326 ORTHO05D009991 1.8e-10 69.3 45 82.2
BolC3t14239H Brassica oleracea HOM05D002326 ORTHO05D009991 1.8e-10 69.3 45 82.2
Cc02_g03040 Coffea canephora HOM05D002326 ORTHO05D009991 1.8e-10 69.3 89 48.3
BcaB01g04198 Brassica carinata HOM05D002326 ORTHO05D009991 4.0e-10 68.2 36 97.2
Carub.0008s1236 Capsella rubella HOM05D002326 ORTHO05D009991 1.5e-09 66.2 36 91.7
Oeu021784.1 Olea europaea HOM05D002326 ORTHO05D009991 1.5e-09 66.2 91 47.3
AUR62015990 Chenopodium quinoa HOM05D002326 ORTHO05D009991 4.4e-09 64.7 90 51.1
CARHR265240 Cardamine hirsuta HOM05D002326 ORTHO05D009991 5.7e-09 64.3 37 86.5
Nitab4.5_0004193g0020 Nicotiana tabacum HOM05D002326 ORTHO05D009991 9.8e-09 63.5 90 44.4
AUR62029000 Chenopodium quinoa HOM05D002326 ORTHO05D009991 1.3e-08 63.2 93 44.1
MSTRG.8741 Avicennia marina HOM05D002326 ORTHO05D009991 2.2e-08 62.4 84 42.9
Lsat_1_v5_gn_2_131881 Lactuca sativa HOM05D002326 ORTHO05D009991 2.2e-08 62.4 83 45.8
CsaV3_3G017070 Cucumis sativus L. HOM05D002326 ORTHO05D009991 3.7e-08 61.6 94 38.3
SalBow4G1928 Salvia bowleyana HOM05D002326 ORTHO05D009991 3.7e-08 61.6 94 40.4
Lalb_Chr21g0305021 Lupinus albus HOM05D002326 ORTHO05D009991 4.9e-08 61.2 61 55.7
SalBow4G2354 Salvia bowleyana HOM05D002326 ORTHO05D009991 4.9e-08 61.2 94 40.4
Potri.012G140600 Populus trichocarpa HOM05D002326 ORTHO05D009991 6.3e-08 60.8 61 47.5
Sed0012701 Sechium edule HOM05D002326 ORTHO05D009991 6.3e-08 60.8 92 38.0
Hund11751 Selenicereus undatus HOM05D002326 ORTHO05D009991 6.3e-08 60.8 90 47.8
MELO3C031642.2 Cucumis melo HOM05D002326 ORTHO05D009991 8.3e-08 60.5 92 37.0
ECA238G1948 Erigeron canadensis HOM05D002326 ORTHO05D009991 3.1e-07 58.5 91 44.0
Phvul.007G069300 Phaseolus vulgaris HOM05D002326 ORTHO05D009991 4.1e-07 58.2 60 51.7
EL10Ac3g05648 Beta vulgaris HOM05D002326 ORTHO05D009991 5.4e-07 57.8 90 44.4
Actinidia31817 Actinidia chinensis HOM05D002326 ORTHO05D009991 9.2e-07 57.0 62 46.8


User provided reference genes

Program Settings