Gene: Solyc03g025860.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc03g025860.3
- Transcript Identifier Solyc03g025860.3.1
- Gene Type Coding gene
- Location SL4.0ch03 : 3241399-3243330 : positive
Gene Family Information
- ID HOM05D002326
- #Genes/#Species 292/99
- Phylogenetic origin
- ID ORTHO05D009991
- #Genes/#Species 82/69
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc03g025860.3.1
- uniprot A0A3Q7FHE1
- gene_id Solyc03g025860
Descriptions
- Description 25.3 kDa vesicle transport protein (AHRD V3.3 *** A0A2U1P9C4_ARTAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016192 | ISO | PLAZA Homology (enrichment) | vesicle-mediated transport | HOM05D002326 |
| GO:0006890 | IBA IEA | GOA Database | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0006890 | IEA | InterPro | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0006888 | IBA IEA | GOA Database | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0048280 | IBA | GOA Database | vesicle fusion with Golgi apparatus |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005484 | IBA IEA | GOA Database | SNAP receptor activity | |
| GO:0005484 | IEA | InterPro | SNAP receptor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031201 | IBA | GOA Database | SNARE complex | |
| GO:0000139 | IBA | GOA Database | Golgi membrane | |
| GO:0012507 | IBA | GOA Database | ER to Golgi transport vesicle membrane | |
| GO:0005789 | IBA | GOA Database | endoplasmic reticulum membrane | |
| GO:0005793 | IBA | GOA Database | endoplasmic reticulum-Golgi intermediate compartment | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 22.3.5.1.5.3 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.R-type SNARE longin components.SEC22-group component |