Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g13960 Schrenkiella parvula HOM05D001120 ORTHO05D002943 5.0e-114 414.5 209 100.0
Sp6g13950 Schrenkiella parvula HOM05D001120 ORTHO05D002943 1.2e-96 356.7 259 74.9
BcaB08g35521 Brassica carinata HOM05D001120 ORTHO05D002943 1.1e-84 317.0 260 66.9
Thhalv10013554m.g Eutrema salsugineum HOM05D001120 ORTHO05D002943 1.1e-81 307.0 260 65.4
A10p09590 Brassica napus HOM05D001120 ORTHO05D002943 1.5e-81 306.6 254 66.5
BraA10t43035Z Brassica rapa HOM05D001120 ORTHO05D002943 2.8e-80 302.4 254 66.5
CARHR264600 Cardamine hirsuta HOM05D001120 ORTHO05D002943 2.8e-77 292.4 263 62.7
Aa31LG3G8190 Aethionema arabicum HOM05D001120 ORTHO05D002943 3.5e-75 285.4 258 62.0
BcaC04g20640 Brassica carinata HOM05D001120 ORTHO05D002943 9.5e-73 277.3 257 61.5
C09p41150 Brassica napus HOM05D001120 ORTHO05D002943 9.5e-73 277.3 257 61.5
BolC9t56993H Brassica oleracea HOM05D001120 ORTHO05D002943 9.5e-73 277.3 257 61.5
AL8G26010 Arabidopsis lyrata HOM05D001120 ORTHO05D002943 5.8e-70 268.1 253 58.9
AT5G51740 Arabidopsis thaliana HOM05D001120 ORTHO05D002943 4.1e-68 261.9 259 58.3
Carub.0008s1176 Capsella rubella HOM05D001120 ORTHO05D002943 2.7e-67 259.2 260 55.4
THA.LOC104806528 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 4.3e-65 251.9 260 56.2
Ciclev10004987m.g Citrus clementina HOM05D001120 ORTHO05D002943 2.0e-46 189.9 249 46.2
Nitab4.5_0006353g0020 Nicotiana tabacum HOM05D001120 ORTHO05D002943 4.9e-45 185.3 153 59.5
QL12p039198 Quercus lobata HOM05D001120 ORTHO05D002943 8.4e-45 184.5 153 63.4
Nitab4.5_0000072g0150 Nicotiana tabacum HOM05D001120 ORTHO05D002943 1.1e-44 184.1 153 59.5
Atru.chr1.607 Acer truncatum HOM05D001120 ORTHO05D002943 1.9e-44 183.3 246 47.6
Haze_13809 Corylus avellana HOM05D001120 ORTHO05D002943 2.4e-44 183.0 153 62.7
Cpa.g.sc3.252 Carica papaya HOM05D001120 ORTHO05D002943 4.2e-44 182.2 260 44.2
Cfa008242 Carpinus fangiana HOM05D001120 ORTHO05D004313 4.2e-44 182.2 153 62.7
Nn1g01163 Nelumbo nucifera HOM05D001120 ORTHO05D002943 5.4e-44 181.8 150 59.3
Dinv28521 Davidia involucrata HOM05D001120 ORTHO05D002943 9.2e-44 181.0 257 44.4
Gohir.A09G178700 Gossypium hirsutum HOM05D001120 ORTHO05D002943 1.2e-43 180.6 153 58.2
Gohir.D09G174300 Gossypium hirsutum HOM05D001120 ORTHO05D002943 1.6e-43 180.3 153 58.2
Gorai.006G196300 Gossypium raimondii HOM05D001120 ORTHO05D002943 1.6e-43 180.3 153 58.2
Sed0024680 Sechium edule HOM05D001120 ORTHO05D002943 1.6e-43 180.3 160 56.2
TAR375G0839 Trochodendron aralioides HOM05D001120 ORTHO05D002943 1.6e-43 180.3 153 58.8
VMungo0464G0810 Vigna mungo HOM05D001120 ORTHO05D002943 2.1e-43 179.9 258 43.8
TWI23G0697 Tripterygium wilfordii HOM05D001120 ORTHO05D002943 2.7e-43 179.5 153 60.8
Duzib084G0753 Durio zibethinus HOM05D001120 ORTHO05D002943 3.5e-43 179.1 255 43.1
Phvul.004G125600 Phaseolus vulgaris HOM05D001120 ORTHO05D002943 3.5e-43 179.1 259 44.0
CANSAT21G0609 Cannabis sativa HOM05D001120 ORTHO05D002943 4.6e-43 178.7 153 58.2
CANSAT21G2509 Cannabis sativa HOM05D001120 ORTHO05D002943 4.6e-43 178.7 153 58.2
Glyma.09G151800 Glycine max HOM05D001120 ORTHO05D002943 6.0e-43 178.3 269 43.5
Solyc03g007000.4 Solanum lycopersicum HOM05D001120 ORTHO05D002943 6.0e-43 178.3 216 48.6
Manes.06G139500 Manihot esculenta HOM05D001120 ORTHO05D002943 7.8e-43 177.9 160 58.8
THA.LOC104811503 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 7.8e-43 177.9 251 46.2
CSS0024775 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 1.0e-42 177.6 153 59.5
Hund11789 Selenicereus undatus HOM05D001120 ORTHO05D002943 1.0e-42 177.6 253 44.7
Cc02_g03730 Coffea canephora HOM05D001120 ORTHO05D002943 1.3e-42 177.2 257 43.2
Eucgr.A02865 Eucalyptus grandis HOM05D001120 ORTHO05D002943 1.3e-42 177.2 150 57.3
Actinidia13529 Actinidia chinensis HOM05D001120 ORTHO05D002943 1.7e-42 176.8 247 44.1
FAN06G0604 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.7e-42 176.8 152 57.2
MELO3C006846.2 Cucumis melo HOM05D001120 ORTHO05D002943 2.3e-42 176.4 263 42.2
FvH4_7g28431 Fragaria vesca HOM05D001120 ORTHO05D002943 3.9e-42 175.6 144 58.3
Potri.012G131100 Populus trichocarpa HOM05D001120 ORTHO05D002943 3.9e-42 175.6 154 57.1
Psat1g105640 Pisum sativum HOM05D001120 ORTHO05D002943 6.6e-42 174.9 250 41.6
CsaV3_3G016470 Cucumis sativus L. HOM05D001120 ORTHO05D002943 8.7e-42 174.5 261 42.9
CAN.G1409.5 Capsicum annuum HOM05D001120 ORTHO05D002943 1.1e-41 174.1 153 58.2
Sc19g0001810 Simmondsia chinensis HOM05D001120 ORTHO05D002943 1.1e-41 174.1 250 41.6
FAN06G3100 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.5e-41 173.7 144 57.6
FAN10G1418 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.5e-41 173.7 144 57.6
Gorai.001G047100 Gossypium raimondii HOM05D001120 ORTHO05D002943 2.5e-41 172.9 256 41.8
vmacro06756 Vaccinium macrocarpon HOM05D001120 ORTHO05D002943 2.5e-41 172.9 249 41.4
ClCG05G007580 Citrullus lanatus HOM05D001120 ORTHO05D002943 3.3e-41 172.6 164 54.9
COL.COLO4_14203 Corchorus olitorius HOM05D001120 ORTHO05D004313 3.3e-41 172.6 154 57.8
FAN03G1503 Fragaria x ananassa HOM05D001120 ORTHO05D002943 3.3e-41 172.6 261 43.3
Peaxi162Scf00192g00835 Petunia axillaris HOM05D001120 ORTHO05D002943 3.3e-41 172.6 253 40.3
Sabra12G0098600 Salix brachista HOM05D001120 ORTHO05D004313 3.3e-41 172.6 154 57.8
PGSC0003DMG400031017 Solanum tuberosum HOM05D001120 ORTHO05D002943 3.3e-41 172.6 153 57.5
arahy.Tifrunner.gnm1.ann1.16TVZ1 Arachis hypogaea HOM05D001120 ORTHO05D002943 4.3e-41 172.2 155 54.8
FAN01G0606 Fragaria x ananassa HOM05D001120 ORTHO05D002943 7.3e-41 171.4 261 42.5
Dinv08003 Davidia involucrata HOM05D001120 ORTHO05D002943 9.6e-41 171.0 256 46.1
Lalb_Chr25g0289251 Lupinus albus HOM05D001120 ORTHO05D002943 9.6e-41 171.0 250 42.4
Sopen03g003000 Solanum pennellii HOM05D001120 ORTHO05D002943 9.6e-41 171.0 153 57.5
arahy.Tifrunner.gnm1.ann1.0ZDL97 Arachis hypogaea HOM05D001120 ORTHO05D002943 1.3e-40 170.6 155 54.2
Prupe.2G284300 Prunus persica HOM05D001120 ORTHO05D002943 1.3e-40 170.6 156 56.4
MD01G1187900 Malus domestica HOM05D001120 ORTHO05D002943 2.1e-40 169.9 259 41.7
FAN03G1927 Fragaria x ananassa HOM05D001120 ORTHO05D002943 3.6e-40 169.1 261 42.5
Lj8C35G5 Lonicera japonica HOM05D001120 ORTHO05D002943 6.2e-40 168.3 249 44.2
CDE11G0287 Ceratophyllum demersum HOM05D001120 ORTHO05D002943 8.1e-40 167.9 154 53.2
Thecc.03G163900 Theobroma cacao HOM05D001120 ORTHO05D002943 8.1e-40 167.9 154 55.8
Lj2g0010051 Lotus japonicus HOM05D001120 ORTHO05D002943 1.1e-39 167.5 261 41.8
RcHm_v2.0_Chr1g0375401 Rosa chinensis HOM05D001120 ORTHO05D002943 1.1e-39 167.5 144 56.2
CiPaw.03G098500 Carya illinoinensis HOM05D001120 ORTHO05D002943 1.4e-39 167.2 153 57.5
Gohir.D07G044000 Gossypium hirsutum HOM05D001120 ORTHO05D002943 1.8e-39 166.8 141 57.4
Rhsim03G0173300 Rhododendron simsii HOM05D001120 ORTHO05D002943 1.8e-39 166.8 163 52.1
Gohir.A07G039900 Gossypium hirsutum HOM05D001120 ORTHO05D002943 2.4e-39 166.4 256 40.2
Medtr3g006860 Medicago truncatula HOM05D001120 ORTHO05D002943 2.4e-39 166.4 153 53.6
Medtr6g463380 Medicago truncatula HOM05D001120 ORTHO05D002943 6.9e-39 164.9 153 53.6
MSTRG.27147 Avicennia marina HOM05D001120 ORTHO05D002943 9.0e-39 164.5 157 52.9
Hma1.2p1_0488F.1_g163780 Hydrangea macrophylla HOM05D001120 ORTHO05D002943 9.0e-39 164.5 153 56.2
CSS0048333 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 2.0e-38 163.3 235 44.3
arahy.Tifrunner.gnm1.ann1.E4F5HJ Arachis hypogaea HOM05D001120 ORTHO05D002943 4.4e-38 162.2 148 54.1
PSO478G1970 Papaver somniferum HOM05D001120 ORTHO05D002943 9.9e-38 161.0 150 54.7
PGR042G0858 Punica granatum HOM05D001120 ORTHO05D002943 9.9e-38 161.0 159 51.6
CSS0048489 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 1.3e-37 160.6 235 43.8
Lsat_1_v5_gn_8_7961 Lactuca sativa HOM05D001120 ORTHO05D002943 1.3e-37 160.6 254 38.6
PSO782G1143 Papaver somniferum HOM05D001120 ORTHO05D002943 1.3e-37 160.6 150 54.0
PSO782G3773 Papaver somniferum HOM05D001120 ORTHO05D002943 2.2e-37 159.8 153 52.9
Aqoxy7G00546 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 2.9e-37 159.5 150 54.7
DCAR_018133 Daucus carota HOM05D001120 ORTHO05D002943 2.9e-37 159.5 151 53.0
MBI12_g37712_MAGBIO Magnolia biondii HOM05D001120 ORTHO05D002943 2.9e-37 159.5 158 56.3
PSO478G4258 Papaver somniferum HOM05D001120 ORTHO05D002943 3.8e-37 159.1 153 53.6
HPP92_007982 Vanilla planifolia HOM05D001120 ORTHO05D002943 4.9e-37 158.7 156 50.0
Migut.F01165 Erythranthe guttata HOM05D001120 ORTHO05D002943 6.4e-37 158.3 155 49.0
Lj6g0021937 Lotus japonicus HOM05D001120 ORTHO05D002943 6.4e-37 158.3 247 42.5
Hund04661 Selenicereus undatus HOM05D001120 ORTHO05D002943 1.1e-36 157.5 150 55.3
HanXRQChr05g0141341 Helianthus annuus HOM05D001120 ORTHO05D002943 1.9e-36 156.8 224 41.1
EL10Ac3g05764 Beta vulgaris HOM05D001120 ORTHO05D002943 2.4e-36 156.4 259 38.6
Oeu021740.1 Olea europaea HOM05D001120 ORTHO05D002943 3.2e-36 156.0 154 51.9
unitig_52.g17752 Utricularia gibba HOM05D001120 ORTHO05D002943 3.2e-36 156.0 152 50.0
Ca_19532_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 2.1e-35 153.3 129 58.1
MD07G1260500 Malus domestica HOM05D001120 ORTHO05D002943 3.5e-35 152.5 139 54.7
arahy.Tifrunner.gnm1.ann1.35XLXM Arachis hypogaea HOM05D001120 ORTHO05D002943 4.6e-35 152.1 164 48.2
arahy.Tifrunner.gnm1.ann1.W17802 Arachis hypogaea HOM05D001120 ORTHO05D002943 4.6e-35 152.1 164 48.2
Glyma.12G117400 Glycine max HOM05D001120 ORTHO05D002943 6.0e-35 151.8 152 53.9
THA.LOC104798865 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 7.8e-35 151.4 258 43.4
Ah.13g067550 Amaranthus hybridus HOM05D001120 ORTHO05D002943 3.9e-34 149.1 194 44.8
AUR62021289 Chenopodium quinoa HOM05D001120 ORTHO05D002943 3.9e-34 149.1 155 49.7
SGA_v2.0_scaffold10G05437 Striga asiatica HOM05D001120 ORTHO05D002943 3.9e-34 149.1 155 49.0
Phvul.011G124600 Phaseolus vulgaris HOM05D001120 ORTHO05D002943 1.3e-32 144.1 146 52.1
ECA233G6122 Erigeron canadensis HOM05D001120 ORTHO05D002943 3.6e-32 142.5 142 50.0
Glyma.06G289600 Glycine max HOM05D001120 ORTHO05D002943 8.1e-32 141.4 267 39.7
THA.LOC104825082 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 8.1e-32 141.4 259 40.2
ATR0757G141 Amborella trichopoda HOM05D001120 ORTHO05D002943 1.1e-31 141.0 152 47.4
THA.LOC104825078 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 1.1e-31 141.0 252 44.8
MD07G1015000 Malus domestica HOM05D001120 ORTHO05D002943 5.3e-31 138.7 153 45.8
arahy.Tifrunner.gnm1.ann1.X1WI1D Arachis hypogaea HOM05D001120 ORTHO05D002943 5.8e-30 135.2 150 48.7
THA.LOC104825079 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 5.8e-30 135.2 251 42.6
THA.LOC104825186 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 6.4e-29 131.7 258 39.5
THA.LOC104825077 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 1.1e-28 131.0 257 40.1
Rhsim09G0194100 Rhododendron simsii HOM05D001120 ORTHO05D002943 3.2e-28 129.4 153 46.4
SEGI_40718 Sequoiadendron giganteum HOM05D001120 ORTHO05D002943 3.2e-28 129.4 151 45.0
Actinidia31796 Actinidia chinensis HOM05D000032 ORTHO05D004313 3.0e-26 122.9 89 62.9
Medtr6g079410 Medicago truncatula HOM05D001120 ORTHO05D002943 1.5e-25 120.6 160 40.0
VMungo1127G0245 Vigna mungo HOM05D001120 ORTHO05D002943 2.5e-25 119.8 155 46.5
Actinidia32913 Actinidia chinensis HOM05D001120 ORTHO05D002943 3.7e-24 115.9 146 43.8
Os02g0735100 Oryza sativa ssp. japonica HOM05D001120 ORTHO05D002943 2.4e-23 113.2 140 41.4
Lsat_1_v5_gn_8_157341 Lactuca sativa HOM05D001120 ORTHO05D002943 5.3e-23 112.1 92 58.7
Atru.chr1.606 Acer truncatum HOM05D001120 ORTHO05D002943 1.4e-20 104.0 184 40.2
Eucgr.A02866 Eucalyptus grandis HOM05D001120 ORTHO05D002943 3.5e-19 99.4 105 47.6
Zm00001eb253810 Zea mays HOM05D001120 ORTHO05D002943 4.6e-19 99.0 132 37.9
Medtr6g061650 Medicago truncatula HOM05D001120 ORTHO05D002943 2.3e-18 96.7 103 45.6
MD07G1261400 Malus domestica HOM05D001120 ORTHO05D002943 8.7e-18 94.7 97 48.5
PSO210G7235 Papaver somniferum HOM05D001120 ORTHO05D002943 8.7e-18 94.7 74 55.4
FAN06G2540 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.9e-17 93.6 156 35.9
PSO832G4332 Papaver somniferum HOM05D001120 ORTHO05D002943 3.7e-16 89.4 134 36.6
RcHm_v2.0_Chr1g0375381 Rosa chinensis HOM05D001120 ORTHO05D002943 8.2e-16 88.2 79 53.2
Pp3c23_3440 Physcomitrium patens HOM05D001120 ORTHO05D002943 9.0e-15 84.7 154 37.7
Mapoly0030s0021 Marchantia polymorpha HOM05D001120 ORTHO05D002943 3.4e-14 82.8 145 34.5
AagrBONN_evm.TU.Sc2ySwM_117.1247 Anthoceros agrestis HOM05D001120 ORTHO05D002943 1.4e-12 77.4 149 30.9
Aqoxy5G03734 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 9.3e-12 74.7 120 40.8
CBR_g433 Chara braunii HOM05D001120 ORTHO05D002943 2.7e-11 73.2 80 45.0
Rhsim07G0025300 Rhododendron simsii HOM05D001120 ORTHO05D002943 4.6e-11 72.4 90 41.1
SMO172G0194 Selaginella moellendorffii HOM05D001120 ORTHO05D002943 7.9e-11 71.6 154 31.2
PSO478G1122 Papaver somniferum HOM05D001120 ORTHO05D002943 1.0e-10 71.2 178 28.1
FAN06G2717 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.8e-10 70.5 76 44.7
FvH4_7g28430 Fragaria vesca HOM05D001120 ORTHO05D002943 3.0e-10 69.7 76 44.7
Rhsim07G0024900 Rhododendron simsii HOM05D001120 ORTHO05D002943 5.1e-10 68.9 83 39.8
HanXRQChr02g0052421 Helianthus annuus HOM05D001120 ORTHO05D002943 6.7e-10 68.6 85 42.4
DCAR_032343 Daucus carota HOM05D001120 ORTHO05D002943 1.5e-09 67.4 113 33.6
DCAR_007088 Daucus carota HOM05D001120 ORTHO05D002943 1.9e-09 67.0 100 34.0
FAN06G4681 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.9e-09 67.0 76 43.4
Aqoxy5G03662 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 3.3e-09 66.2 81 40.7
Ca_19537_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 7.4e-09 65.1 66 43.9
arahy.Tifrunner.gnm1.ann1.Q1XR2M Arachis hypogaea HOM05D001120 ORTHO05D002943 2.8e-08 63.2 89 40.4
Ca_11072_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 2.8e-08 63.2 72 40.3
Ca_19538_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 2.8e-08 63.2 72 40.3
Rhsim07G0025100 Rhododendron simsii HOM05D001120 ORTHO05D002943 3.7e-08 62.8 90 38.9
TPR.G15608 Trifolium pratense HOM05D001120 ORTHO05D002943 3.7e-08 62.8 57 49.1
FAN10G3067 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.1e-07 61.2 73 42.5
Medtr1g014390 Medicago truncatula HOM05D001120 ORTHO05D002943 2.4e-07 60.1 75 40.0
EL10Ac3g05118 Beta vulgaris HOM05D001120 ORTHO05D002943 9.0e-07 58.2 82 39.0
Medtr1g012010 Medicago truncatula HOM05D001120 ORTHO05D002943 4.5e-06 55.8 66 42.4
Rhsim07G0026200 Rhododendron simsii HOM05D001120 ORTHO05D002943 4.5e-06 55.8 109 31.2
PSO478G1088 Papaver somniferum HOM05D001120 ORTHO05D002943 1.0e-05 54.7 58 48.3


User provided reference genes

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