Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g13950 Schrenkiella parvula HOM05D001120 ORTHO05D002943 2.7e-163 578.6 287 100.0
BcaB08g35521 Brassica carinata HOM05D001120 ORTHO05D002943 7.3e-124 447.6 257 86.4
Thhalv10013554m.g Eutrema salsugineum HOM05D001120 ORTHO05D002943 4.4e-121 438.3 261 84.7
A10p09590 Brassica napus HOM05D001120 ORTHO05D002943 1.7e-117 426.4 257 84.4
BraA10t43035Z Brassica rapa HOM05D001120 ORTHO05D002943 3.6e-115 418.7 257 83.3
BcaC04g20640 Brassica carinata HOM05D001120 ORTHO05D002943 5.4e-111 404.8 257 80.9
C09p41150 Brassica napus HOM05D001120 ORTHO05D002943 5.4e-111 404.8 257 80.9
BolC9t56993H Brassica oleracea HOM05D001120 ORTHO05D002943 5.4e-111 404.8 257 80.9
CARHR264600 Cardamine hirsuta HOM05D001120 ORTHO05D002943 1.2e-110 403.7 262 79.4
Aa31LG3G8190 Aethionema arabicum HOM05D001120 ORTHO05D002943 4.7e-107 391.7 259 77.2
AL8G26010 Arabidopsis lyrata HOM05D001120 ORTHO05D002943 8.1e-107 391.0 259 77.6
AT5G51740 Arabidopsis thaliana HOM05D001120 ORTHO05D002943 9.9e-105 384.0 261 77.8
Carub.0008s1176 Capsella rubella HOM05D001120 ORTHO05D002943 1.3e-101 373.6 259 72.6
Sp6g13960 Schrenkiella parvula HOM05D001120 ORTHO05D002943 3.8e-96 355.5 259 74.9
THA.LOC104806528 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 6.0e-94 348.2 260 71.2
QL12p039198 Quercus lobata HOM05D001120 ORTHO05D002943 9.3e-71 271.2 276 56.2
Dinv28521 Davidia involucrata HOM05D001120 ORTHO05D002943 6.0e-70 268.5 257 57.2
Nitab4.5_0006353g0020 Nicotiana tabacum HOM05D001120 ORTHO05D002943 6.7e-69 265.0 254 53.9
Cpa.g.sc3.252 Carica papaya HOM05D001120 ORTHO05D002943 8.7e-69 264.6 263 56.3
Gorai.006G196300 Gossypium raimondii HOM05D001120 ORTHO05D002943 8.7e-69 264.6 259 56.4
Gohir.D09G174300 Gossypium hirsutum HOM05D001120 ORTHO05D002943 1.1e-68 264.2 259 56.4
Gohir.A09G178700 Gossypium hirsutum HOM05D001120 ORTHO05D002943 1.9e-68 263.5 259 55.6
Nitab4.5_0000072g0150 Nicotiana tabacum HOM05D001120 ORTHO05D002943 2.5e-68 263.1 254 53.9
Duzib084G0753 Durio zibethinus HOM05D001120 ORTHO05D002943 3.3e-68 262.7 270 52.6
Phvul.004G125600 Phaseolus vulgaris HOM05D001120 ORTHO05D002943 5.7e-68 261.9 272 54.8
Ciclev10004987m.g Citrus clementina HOM05D001120 ORTHO05D002943 2.2e-67 260.0 259 54.4
Haze_13809 Corylus avellana HOM05D001120 ORTHO05D002943 6.3e-67 258.5 261 57.5
Potri.012G131100 Populus trichocarpa HOM05D001120 ORTHO05D002943 1.1e-66 257.7 267 53.6
TWI23G0697 Tripterygium wilfordii HOM05D001120 ORTHO05D002943 1.4e-66 257.3 262 56.1
Atru.chr1.607 Acer truncatum HOM05D001120 ORTHO05D002943 2.4e-66 256.5 249 58.6
CANSAT21G0609 Cannabis sativa HOM05D001120 ORTHO05D002943 2.4e-66 256.5 260 54.6
CANSAT21G2509 Cannabis sativa HOM05D001120 ORTHO05D002943 2.4e-66 256.5 260 54.6
Sed0024680 Sechium edule HOM05D001120 ORTHO05D002943 2.4e-66 256.5 257 53.3
CSS0024775 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 1.2e-65 254.2 257 54.1
Cfa008242 Carpinus fangiana HOM05D001120 ORTHO05D004313 2.0e-65 253.4 259 55.6
Manes.06G139500 Manihot esculenta HOM05D001120 ORTHO05D002943 3.4e-65 252.7 268 54.5
MELO3C006846.2 Cucumis melo HOM05D001120 ORTHO05D002943 4.5e-65 252.3 257 52.1
Sabra12G0098600 Salix brachista HOM05D001120 ORTHO05D004313 5.9e-65 251.9 263 53.6
VMungo0464G0810 Vigna mungo HOM05D001120 ORTHO05D002943 5.9e-65 251.9 272 54.0
CsaV3_3G016470 Cucumis sativus L. HOM05D001120 ORTHO05D002943 7.7e-65 251.5 257 52.5
Peaxi162Scf00192g00835 Petunia axillaris HOM05D001120 ORTHO05D002943 7.7e-65 251.5 262 51.1
THA.LOC104811503 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 1.3e-64 250.8 262 56.1
Hma1.2p1_0488F.1_g163780 Hydrangea macrophylla HOM05D001120 ORTHO05D002943 1.4e-63 247.3 267 54.3
ClCG05G007580 Citrullus lanatus HOM05D001120 ORTHO05D002943 1.9e-63 246.9 245 52.2
CiPaw.03G098500 Carya illinoinensis HOM05D001120 ORTHO05D002943 2.5e-63 246.5 265 54.0
PGSC0003DMG400031017 Solanum tuberosum HOM05D001120 ORTHO05D002943 2.5e-63 246.5 255 53.7
Glyma.09G151800 Glycine max HOM05D001120 ORTHO05D002943 3.2e-63 246.1 270 52.6
MD01G1187900 Malus domestica HOM05D001120 ORTHO05D002943 4.2e-63 245.7 261 52.5
CAN.G1409.5 Capsicum annuum HOM05D001120 ORTHO05D002943 5.5e-63 245.4 267 50.9
Prupe.2G284300 Prunus persica HOM05D001120 ORTHO05D002943 5.5e-63 245.4 259 54.1
Lj2g0010051 Lotus japonicus HOM05D001120 ORTHO05D002943 1.2e-62 244.2 261 53.3
Lalb_Chr25g0289251 Lupinus albus HOM05D001120 ORTHO05D002943 3.6e-62 242.7 258 52.3
Sopen03g003000 Solanum pennellii HOM05D001120 ORTHO05D002943 6.1e-62 241.9 254 52.8
Actinidia13529 Actinidia chinensis HOM05D001120 ORTHO05D002943 7.9e-62 241.5 262 51.5
Gorai.001G047100 Gossypium raimondii HOM05D001120 ORTHO05D002943 7.9e-62 241.5 274 50.4
TAR375G0839 Trochodendron aralioides HOM05D001120 ORTHO05D002943 7.9e-62 241.5 254 51.6
Sc19g0001810 Simmondsia chinensis HOM05D001120 ORTHO05D002943 2.3e-61 240.0 254 50.4
Thecc.03G163900 Theobroma cacao HOM05D001120 ORTHO05D002943 2.3e-61 240.0 262 51.5
arahy.Tifrunner.gnm1.ann1.16TVZ1 Arachis hypogaea HOM05D001120 ORTHO05D002943 8.8e-61 238.0 263 50.6
Hund11789 Selenicereus undatus HOM05D001120 ORTHO05D002943 1.1e-60 237.7 269 50.9
arahy.Tifrunner.gnm1.ann1.0ZDL97 Arachis hypogaea HOM05D001120 ORTHO05D002943 2.0e-60 236.9 263 50.2
Dinv08003 Davidia involucrata HOM05D001120 ORTHO05D002943 2.0e-60 236.9 262 56.1
Eucgr.A02865 Eucalyptus grandis HOM05D001120 ORTHO05D002943 3.3e-60 236.1 183 61.7
Gohir.A07G039900 Gossypium hirsutum HOM05D001120 ORTHO05D002943 3.3e-60 236.1 274 48.9
Nn1g01163 Nelumbo nucifera HOM05D001120 ORTHO05D002943 3.3e-60 236.1 263 49.4
Rhsim03G0173300 Rhododendron simsii HOM05D001120 ORTHO05D002943 3.3e-60 236.1 260 49.6
vmacro06756 Vaccinium macrocarpon HOM05D001120 ORTHO05D002943 5.7e-60 235.3 263 49.0
Cc02_g03730 Coffea canephora HOM05D001120 ORTHO05D002943 1.7e-59 233.8 261 50.6
COL.COLO4_14203 Corchorus olitorius HOM05D001120 ORTHO05D004313 2.8e-59 233.0 255 51.8
Gohir.D07G044000 Gossypium hirsutum HOM05D001120 ORTHO05D002943 1.8e-58 230.3 226 54.4
THA.LOC104798865 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 2.4e-58 229.9 259 54.8
Lsat_1_v5_gn_8_7961 Lactuca sativa HOM05D001120 ORTHO05D002943 3.4e-57 226.1 255 48.2
FAN01G0606 Fragaria x ananassa HOM05D001120 ORTHO05D002943 5.9e-57 225.3 262 50.0
Lj8C35G5 Lonicera japonica HOM05D001120 ORTHO05D002943 1.7e-56 223.8 258 50.8
FAN03G1503 Fragaria x ananassa HOM05D001120 ORTHO05D002943 2.2e-56 223.4 261 50.6
Psat1g105640 Pisum sativum HOM05D001120 ORTHO05D002943 2.2e-56 223.4 260 48.1
MSTRG.27147 Avicennia marina HOM05D001120 ORTHO05D002943 8.5e-56 221.5 263 46.4
CSS0048333 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 1.1e-55 221.1 254 48.8
FAN06G0604 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.1e-55 221.1 262 48.5
Ah.13g067550 Amaranthus hybridus HOM05D001120 ORTHO05D002943 1.4e-55 220.7 258 47.7
Oeu021740.1 Olea europaea HOM05D001120 ORTHO05D002943 1.4e-55 220.7 263 49.0
FvH4_7g28431 Fragaria vesca HOM05D001120 ORTHO05D002943 1.9e-55 220.3 264 50.0
CDE11G0287 Ceratophyllum demersum HOM05D001120 ORTHO05D002943 2.5e-55 219.9 259 46.7
FAN03G1927 Fragaria x ananassa HOM05D001120 ORTHO05D002943 2.5e-55 219.9 261 49.8
RcHm_v2.0_Chr1g0375401 Rosa chinensis HOM05D001120 ORTHO05D002943 2.5e-55 219.9 269 48.0
FAN06G3100 Fragaria x ananassa HOM05D001120 ORTHO05D002943 7.2e-55 218.4 264 49.6
PGR042G0858 Punica granatum HOM05D001120 ORTHO05D002943 1.2e-54 217.6 266 48.1
Aqoxy7G00546 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 2.7e-54 216.5 263 47.5
FAN10G1418 Fragaria x ananassa HOM05D001120 ORTHO05D002943 2.7e-54 216.5 263 47.1
EL10Ac3g05764 Beta vulgaris HOM05D001120 ORTHO05D002943 4.7e-54 215.7 259 44.0
CSS0048489 Camellia sinensis var. sinensis HOM05D001120 ORTHO05D002943 6.1e-54 215.3 254 48.0
SGA_v2.0_scaffold10G05437 Striga asiatica HOM05D001120 ORTHO05D002943 7.9e-54 214.9 266 45.9
unitig_52.g17752 Utricularia gibba HOM05D001120 ORTHO05D002943 1.0e-53 214.5 182 56.6
Glyma.06G289600 Glycine max HOM05D001120 ORTHO05D002943 1.4e-53 214.2 281 48.4
Lj6g0021937 Lotus japonicus HOM05D001120 ORTHO05D002943 1.4e-53 214.2 260 48.8
PSO782G3773 Papaver somniferum HOM05D001120 ORTHO05D002943 2.3e-53 213.4 259 46.3
MBI12_g37712_MAGBIO Magnolia biondii HOM05D001120 ORTHO05D002943 6.7e-53 211.8 265 46.8
PSO782G1143 Papaver somniferum HOM05D001120 ORTHO05D002943 2.0e-52 210.3 213 50.2
PSO478G4258 Papaver somniferum HOM05D001120 ORTHO05D002943 5.7e-52 208.8 261 46.4
Medtr6g463380 Medicago truncatula HOM05D001120 ORTHO05D002943 9.7e-52 208.0 176 57.4
Hund04661 Selenicereus undatus HOM05D001120 ORTHO05D002943 9.7e-52 208.0 268 47.4
Medtr3g006860 Medicago truncatula HOM05D001120 ORTHO05D002943 2.2e-51 206.8 176 57.4
PSO478G1970 Papaver somniferum HOM05D001120 ORTHO05D002943 2.2e-51 206.8 244 48.0
Migut.F01165 Erythranthe guttata HOM05D001120 ORTHO05D002943 2.8e-51 206.5 266 44.7
HanXRQChr05g0141341 Helianthus annuus HOM05D001120 ORTHO05D002943 2.8e-51 206.5 254 45.7
THA.LOC104825082 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 5.3e-50 202.2 260 49.6
Solyc03g007000.4 Solanum lycopersicum HOM05D001120 ORTHO05D002943 8.5e-48 194.9 156 62.8
Phvul.011G124600 Phaseolus vulgaris HOM05D001120 ORTHO05D002943 3.2e-47 193.0 275 44.7
THA.LOC104825078 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 3.2e-47 193.0 258 52.3
ATR0757G141 Amborella trichopoda HOM05D001120 ORTHO05D002943 4.2e-47 192.6 182 51.6
THA.LOC104825186 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 7.2e-47 191.8 259 48.6
THA.LOC104825077 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 6.1e-46 188.7 258 48.4
MD07G1015000 Malus domestica HOM05D001120 ORTHO05D002943 8.0e-46 188.3 189 49.7
THA.LOC104825079 Tarenaya hassleriana HOM05D001120 ORTHO05D002943 2.6e-44 183.3 259 49.0
HPP92_007982 Vanilla planifolia HOM05D001120 ORTHO05D002943 2.6e-44 183.3 179 49.7
Rhsim09G0194100 Rhododendron simsii HOM05D001120 ORTHO05D002943 2.0e-41 173.7 268 41.0
SEGI_40718 Sequoiadendron giganteum HOM05D001120 ORTHO05D002943 2.0e-41 173.7 191 44.0
arahy.Tifrunner.gnm1.ann1.E4F5HJ Arachis hypogaea HOM05D001120 ORTHO05D002943 3.5e-41 172.9 159 55.3
Lsat_1_v5_gn_8_157341 Lactuca sativa HOM05D001120 ORTHO05D002943 7.2e-39 165.2 194 46.4
DCAR_018133 Daucus carota HOM05D001120 ORTHO05D002943 2.1e-38 163.7 151 54.3
arahy.Tifrunner.gnm1.ann1.35XLXM Arachis hypogaea HOM05D001120 ORTHO05D002943 1.8e-37 160.6 164 49.4
arahy.Tifrunner.gnm1.ann1.W17802 Arachis hypogaea HOM05D001120 ORTHO05D002943 1.8e-37 160.6 164 49.4
VMungo1127G0245 Vigna mungo HOM05D001120 ORTHO05D002943 2.3e-37 160.2 229 45.9
Glyma.12G117400 Glycine max HOM05D001120 ORTHO05D002943 8.8e-37 158.3 152 55.3
MD07G1260500 Malus domestica HOM05D001120 ORTHO05D002943 1.2e-36 157.9 135 56.3
Ca_19532_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 2.2e-35 153.7 129 58.1
AUR62021289 Chenopodium quinoa HOM05D001120 ORTHO05D002943 2.4e-34 150.2 135 54.1
ECA233G6122 Erigeron canadensis HOM05D001120 ORTHO05D002943 4.1e-34 149.4 141 51.8
arahy.Tifrunner.gnm1.ann1.X1WI1D Arachis hypogaea HOM05D001120 ORTHO05D002943 1.6e-33 147.5 159 48.4
Actinidia31796 Actinidia chinensis HOM05D000032 ORTHO05D004313 2.5e-31 140.2 121 59.5
Medtr6g079410 Medicago truncatula HOM05D001120 ORTHO05D002943 7.2e-31 138.7 258 34.1
Atru.chr1.606 Acer truncatum HOM05D001120 ORTHO05D002943 2.2e-27 127.1 200 44.0
Os02g0735100 Oryza sativa ssp. japonica HOM05D001120 ORTHO05D002943 7.0e-26 122.1 162 39.5
Actinidia32913 Actinidia chinensis HOM05D001120 ORTHO05D002943 4.5e-25 119.4 105 58.1
Eucgr.A02866 Eucalyptus grandis HOM05D001120 ORTHO05D002943 8.6e-24 115.2 145 45.5
Mapoly0030s0021 Marchantia polymorpha HOM05D001120 ORTHO05D002943 3.3e-23 113.2 223 34.1
RcHm_v2.0_Chr1g0375381 Rosa chinensis HOM05D001120 ORTHO05D002943 5.5e-23 112.5 213 37.6
Zm00001eb253810 Zea mays HOM05D001120 ORTHO05D002943 4.4e-20 102.8 135 38.5
AagrBONN_evm.TU.Sc2ySwM_117.1247 Anthoceros agrestis HOM05D001120 ORTHO05D002943 7.5e-20 102.1 238 31.5
Medtr6g061650 Medicago truncatula HOM05D001120 ORTHO05D002943 6.3e-19 99.0 103 47.6
Pp3c23_3440 Physcomitrium patens HOM05D001120 ORTHO05D002943 8.3e-19 98.6 188 35.6
FAN06G2540 Fragaria x ananassa HOM05D001120 ORTHO05D002943 1.4e-18 97.8 248 29.8
MD07G1261400 Malus domestica HOM05D001120 ORTHO05D002943 9.2e-18 95.1 97 49.5
PSO210G7235 Papaver somniferum HOM05D001120 ORTHO05D002943 1.6e-17 94.4 74 58.1
PSO832G4332 Papaver somniferum HOM05D001120 ORTHO05D002943 2.0e-17 94.0 90 52.2
CBR_g433 Chara braunii HOM05D001120 ORTHO05D002943 3.9e-16 89.7 116 44.0
Aqoxy5G03662 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 1.5e-15 87.8 110 44.5
HanXRQChr02g0052421 Helianthus annuus HOM05D001120 ORTHO05D002943 2.1e-14 84.0 200 29.5
PSO478G1122 Papaver somniferum HOM05D001120 ORTHO05D002943 8.9e-13 78.6 214 32.2
Rhsim07G0025300 Rhododendron simsii HOM05D001120 ORTHO05D002943 3.7e-11 73.2 93 38.7
SMO172G0194 Selaginella moellendorffii HOM05D001120 ORTHO05D002943 8.3e-11 72.0 143 31.5
FAN06G2717 Fragaria x ananassa HOM05D001120 ORTHO05D002943 3.2e-10 70.1 93 38.7
Rhsim07G0024900 Rhododendron simsii HOM05D001120 ORTHO05D002943 4.1e-10 69.7 80 40.0
FvH4_7g28430 Fragaria vesca HOM05D001120 ORTHO05D002943 9.2e-10 68.6 72 45.8
Aqoxy5G03734 Aquilegia oxysepala HOM05D001120 ORTHO05D002943 1.6e-09 67.8 124 37.9
Ca_19537_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 1.6e-09 67.8 66 47.0
Ca_11072_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 2.0e-09 67.4 146 29.5
Ca_19538_v3 Cicer arietinum L. HOM05D001120 ORTHO05D002943 2.0e-09 67.4 146 29.5
FAN06G4681 Fragaria x ananassa HOM05D001120 ORTHO05D002943 7.8e-09 65.5 208 29.8
DCAR_032343 Daucus carota HOM05D001120 ORTHO05D002943 1.3e-08 64.7 141 31.2
arahy.Tifrunner.gnm1.ann1.Q1XR2M Arachis hypogaea HOM05D001120 ORTHO05D002943 1.7e-08 64.3 94 41.5
DCAR_007088 Daucus carota HOM05D001120 ORTHO05D002943 3.9e-08 63.2 128 31.2
FAN10G3067 Fragaria x ananassa HOM05D001120 ORTHO05D002943 3.9e-08 63.2 69 44.9
EL10Ac3g05118 Beta vulgaris HOM05D001120 ORTHO05D002943 5.0e-08 62.8 82 42.7
HanXRQChr04g0116241 Helianthus annuus HOM05D001120 ORTHO05D002943 6.6e-08 62.4 187 31.6
Medtr1g014390 Medicago truncatula HOM05D001120 ORTHO05D002943 1.9e-07 60.8 75 40.0
Rhsim07G0025100 Rhododendron simsii HOM05D001120 ORTHO05D002943 5.6e-07 59.3 93 39.8
TPR.G15608 Trifolium pratense HOM05D001120 ORTHO05D002943 7.3e-07 58.9 57 47.4
Medtr1g012010 Medicago truncatula HOM05D001120 ORTHO05D002943 1.6e-06 57.8 67 46.3
QL08p051844 Quercus lobata HOM05D001120 ORTHO05D002943 4.7e-06 56.2 198 27.8
PSO478G1088 Papaver somniferum HOM05D001120 ORTHO05D002943 6.2e-06 55.8 90 41.1


User provided reference genes

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