Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g12100 Schrenkiella parvula HOM05D000068 ORTHO05D372237 3.3e-27 124.4 68 100.0
Sp7g26600 Schrenkiella parvula HOM05D000068 ORTHO05D004908 3.1e-17 91.3 56 89.3
Carub.0007s1203 Capsella rubella HOM05D000068 ORTHO05D004908 1.9e-14 82.0 53 83.0
C01p10890 Brassica napus HOM05D000068 ORTHO05D004908 2.5e-14 81.6 59 79.7
BolC1t01053H Brassica oleracea HOM05D000068 ORTHO05D004908 4.2e-14 80.9 59 78.0
BcaNung04693 Brassica carinata HOM05D000068 ORTHO05D004908 7.2e-14 80.1 56 82.1
Thhalv10027580m.g Eutrema salsugineum HOM05D000068 ORTHO05D004908 1.2e-13 79.3 55 81.8
AL7G23910 Arabidopsis lyrata HOM05D000068 ORTHO05D004908 1.6e-13 79.0 56 78.6
BcaNung04291 Brassica carinata HOM05D000068 ORTHO05D004908 2.1e-13 78.6 59 76.3
AT4G28630 Arabidopsis thaliana HOM05D000068 ORTHO05D004908 3.6e-13 77.8 57 77.2
A01p09310 Brassica napus HOM05D000068 ORTHO05D004908 3.6e-13 77.8 58 74.1
BraA01t00875Z Brassica rapa HOM05D000068 ORTHO05D004908 3.6e-13 77.8 58 74.1
AL7G23920 Arabidopsis lyrata HOM05D000068 ORTHO05D004908 7.5e-11 70.1 66 65.2
AT4G28620 Arabidopsis thaliana HOM05D000068 ORTHO05D004908 4.8e-10 67.4 66 63.6
THA.LOC104819154 Tarenaya hassleriana HOM05D000068 ORTHO05D004908 9.1e-09 63.2 56 64.3
Aa31LG10G11520 Aethionema arabicum HOM05D000068 ORTHO05D004908 7.7e-08 60.1 62 59.7
Aa31LG11G60 Aethionema arabicum HOM05D000068 ORTHO05D004908 7.7e-08 60.1 62 61.3
AL8G34370 Arabidopsis lyrata HOM05D000068 ORTHO05D004908 3.8e-07 57.8 62 58.1
AT5G58270 Arabidopsis thaliana HOM05D000068 ORTHO05D004908 3.8e-07 57.8 62 58.1
unitig_62.g23946 Utricularia gibba HOM05D000068 ORTHO05D004908 3.8e-07 57.8 62 54.8
BolC9t57863H Brassica oleracea HOM05D000068 ORTHO05D004908 5.0e-07 57.4 62 58.1
Carub.0008s1881 Capsella rubella HOM05D000068 ORTHO05D004908 5.0e-07 57.4 62 56.5
BcaC04g19897 Brassica carinata HOM05D000068 ORTHO05D004908 6.6e-07 57.0 62 58.1
A10p15950 Brassica napus HOM05D000068 ORTHO05D004908 6.6e-07 57.0 62 58.1
C09p50100 Brassica napus HOM05D000068 ORTHO05D004908 6.6e-07 57.0 62 58.1
BraA10t43629Z Brassica rapa HOM05D000068 ORTHO05D004908 6.6e-07 57.0 62 58.1
Atru.chr10.2353 Acer truncatum HOM05D000068 ORTHO05D004908 8.6e-07 56.6 63 55.6
Thhalv10012795m.g Eutrema salsugineum HOM05D000068 ORTHO05D004908 1.1e-06 56.2 62 56.5
Glyma.02G238300 Glycine max HOM05D000068 ORTHO05D004908 1.1e-06 56.2 58 58.6
Lalb_Chr04g0251601 Lupinus albus HOM05D000068 ORTHO05D004908 1.1e-06 56.2 62 56.5
Psat2g050120 Pisum sativum HOM05D000068 ORTHO05D004908 1.1e-06 56.2 58 56.9
AUR62027443 Chenopodium quinoa HOM05D000068 ORTHO05D004908 1.5e-06 55.8 62 54.8
AUR62031258 Chenopodium quinoa HOM05D000068 ORTHO05D004908 1.5e-06 55.8 62 54.8
Sp6g19930 Schrenkiella parvula HOM05D000068 ORTHO05D004908 1.5e-06 55.8 62 56.5
Ah.14g086040 Amaranthus hybridus HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 54.8
BcaB01g04484 Brassica carinata HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 56.5
BcaB01g04535 Brassica carinata HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 56.5
A03p12330 Brassica napus HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 56.5
C03p14480 Brassica napus HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 56.5
BolC3t13890H Brassica oleracea HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 56.5
BraA03t10545Z Brassica rapa HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 56.5
Cpa.g.sc2.263 Carica papaya HOM05D000068 ORTHO05D004908 1.9e-06 55.5 62 50.0
BcaB01g04541 Brassica carinata HOM05D000068 ORTHO05D004908 2.5e-06 55.1 62 54.8
TPR.G15393 Trifolium pratense HOM05D000068 ORTHO05D004908 3.3e-06 54.7 58 53.4
EL10Ac8g19280 Beta vulgaris HOM05D000068 ORTHO05D004908 4.2e-06 54.3 62 53.2
Eucgr.B04035 Eucalyptus grandis HOM05D000068 ORTHO05D004908 4.2e-06 54.3 62 54.8
Glyma.14G207200 Glycine max HOM05D000068 ORTHO05D004908 5.5e-06 53.9 58 56.9
TWI31G0374 Tripterygium wilfordii HOM05D000068 ORTHO05D004908 5.5e-06 53.9 62 54.8
CANSAT54G1816 Cannabis sativa HOM05D000068 ORTHO05D004908 7.2e-06 53.5 62 51.6
Oeu034744.1 Olea europaea HOM05D000068 ORTHO05D004908 7.2e-06 53.5 62 54.8
Oeu034745.1 Olea europaea HOM05D000068 ORTHO05D004908 7.2e-06 53.5 62 54.8
DCAR_012718 Daucus carota HOM05D000068 ORTHO05D004908 9.5e-06 53.1 62 53.2
Lj2A1105G55 Lonicera japonica HOM05D000068 ORTHO05D004908 9.5e-06 53.1 62 54.8
VMungo0647G2416 Vigna mungo HOM05D006472 ORTHO05D008222 9.5e-06 53.1 58 56.9


User provided reference genes

Program Settings