Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 4.8e-191 671.0 339 100.0
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.9e-184 649.0 339 95.6
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.9e-184 649.0 339 95.6
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 3.3e-184 648.3 339 95.6
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 4.3e-184 647.9 339 95.0
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 5.7e-184 647.5 339 95.0
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 1.6e-183 646.0 339 94.7
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 3.7e-183 644.8 339 94.4
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 8.2e-183 643.7 339 94.4
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 8.2e-183 643.7 339 94.1
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 1.4e-182 642.9 339 95.3
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 6.5e-180 634.0 339 94.4
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 1.8e-177 625.9 339 91.7
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 3.7e-175 618.2 337 92.9
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 5.3e-174 614.4 339 90.9
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 1.5e-173 612.8 339 90.3
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 2.0e-173 612.5 339 90.0
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.6e-173 612.1 337 91.1
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.6e-173 612.1 337 91.1
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 2.6e-173 612.1 337 91.1
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 4.5e-173 611.3 337 91.1
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 5.9e-173 610.9 339 90.0
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 1.0e-172 610.1 338 89.1
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 1.3e-172 609.8 337 90.5
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 2.2e-172 609.0 339 88.8
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.9e-172 608.6 337 90.2
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 3.8e-172 608.2 339 89.1
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 6.5e-172 607.4 339 88.8
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 8.5e-172 607.1 337 90.5
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 8.5e-172 607.1 339 88.5
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 8.5e-172 607.1 339 90.0
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 8.5e-172 607.1 339 89.1
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 1.4e-171 606.3 339 89.7
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 2.5e-171 605.5 338 88.5
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 2.5e-171 605.5 336 89.6
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 4.2e-171 604.7 339 88.8
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.2e-171 604.7 336 89.9
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 4.2e-171 604.7 338 88.5
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 4.2e-171 604.7 337 89.6
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 5.5e-171 604.4 339 89.7
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 5.5e-171 604.4 339 88.5
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 7.2e-171 604.0 338 88.5
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 7.2e-171 604.0 337 88.7
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 1.2e-170 603.2 338 88.8
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 1.2e-170 603.2 336 89.6
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 2.7e-170 602.1 339 88.5
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 2.7e-170 602.1 339 88.5
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 3.6e-170 601.7 338 88.2
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 3.6e-170 601.7 338 88.2
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 4.7e-170 601.3 339 87.9
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 6.1e-170 600.9 338 89.1
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 7.9e-170 600.5 339 88.2
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 1.0e-169 600.1 338 87.9
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 1.4e-169 599.7 338 88.5
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 1.8e-169 599.4 339 88.2
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 1.8e-169 599.4 339 87.9
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 2.3e-169 599.0 339 86.7
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 3.0e-169 598.6 339 86.7
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 6.7e-169 597.4 337 87.5
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 2.0e-168 595.9 339 87.0
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 2.6e-168 595.5 339 87.3
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 2.6e-168 595.5 336 87.5
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 3.3e-168 595.1 328 89.9
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 4.4e-168 594.7 339 87.3
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 5.7e-168 594.3 338 87.6
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 1.3e-167 593.2 342 86.0
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 1.7e-167 592.8 339 87.3
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 2.2e-167 592.4 339 87.3
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.8e-167 592.0 338 87.9
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 2.8e-167 592.0 339 87.0
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 3.7e-167 591.7 338 87.9
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 6.3e-167 590.9 339 86.7
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 8.2e-167 590.5 338 87.0
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 1.1e-166 590.1 339 86.7
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 1.4e-166 589.7 338 85.8
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 3.1e-166 588.6 339 86.7
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 4.1e-166 588.2 337 87.2
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 1.2e-165 586.6 339 86.1
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 2.6e-165 585.5 376 80.1
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 3.4e-165 585.1 342 84.2
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 5.9e-165 584.3 339 85.3
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 5.9e-165 584.3 362 81.8
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.0e-164 583.6 339 83.8
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 1.0e-164 583.6 339 85.0
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 1.7e-164 582.8 338 86.4
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 2.2e-164 582.4 328 87.8
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 3.8e-164 581.6 339 85.5
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 3.8e-164 581.6 339 85.5
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 5.0e-164 581.3 339 85.8
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 6.5e-164 580.9 337 86.6
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 1.1e-163 580.1 336 85.1
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 1.9e-163 579.3 339 85.3
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 5.5e-163 577.8 338 84.9
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 9.4e-163 577.0 339 82.9
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 9.4e-163 577.0 337 85.8
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 1.2e-162 576.6 330 86.1
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 1.2e-162 576.6 338 84.6
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 2.1e-162 575.9 327 86.5
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 1.0e-161 573.5 315 89.8
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 4.4e-160 568.2 370 78.9
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 2.4e-158 562.4 360 80.6
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 1.7e-156 556.2 328 83.8
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 2.2e-156 555.8 394 74.1
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 8.0e-154 547.4 339 79.6
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 8.8e-153 543.9 322 81.1
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 2.6e-152 542.3 339 77.6
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 3.1e-150 535.4 337 77.7
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 3.5e-149 531.9 339 77.9
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 3.8e-148 528.5 339 76.7
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 8.5e-148 527.3 339 74.9
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 3.2e-147 525.4 339 79.4
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 1.6e-146 523.1 322 78.6
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 6.8e-145 517.7 338 74.6
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 8.8e-145 517.3 343 75.5
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 1.6e-138 496.5 313 76.0
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 7.5e-136 487.6 339 71.4
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 2.2e-135 486.1 325 73.2
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 3.9e-124 448.7 319 68.3
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 7.3e-123 444.5 339 68.7
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 3.1e-121 439.1 339 70.5
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 8.3e-119 431.0 239 88.7
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 7.0e-118 427.9 252 84.5
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 6.6e-116 421.4 249 85.1
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 3.4e-112 409.1 245 83.7
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 7.5e-112 407.9 253 79.1
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.1e-110 404.1 330 65.5
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 8.1e-106 387.9 208 91.3
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 1.1e-105 387.5 231 84.0
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 4.0e-105 385.6 217 89.4
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 4.4e-104 382.1 220 85.9
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 6.9e-97 358.2 194 89.7
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 8.4e-95 351.3 309 57.3
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 6.0e-93 345.1 191 89.5
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 7.3e-91 338.2 199 81.4
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 3.5e-85 319.3 324 53.4
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 1.2e-80 304.3 242 63.2
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.1e-77 293.5 171 84.2
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 5.6e-75 285.4 195 68.2
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 7.7e-64 248.4 145 87.6
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 3.8e-63 246.1 135 90.4
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 1.0e-60 238.0 148 80.4
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 8.8e-52 208.4 155 65.2
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 9.4e-46 188.3 148 68.2
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 2.2e-39 167.2 87 90.8
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 3.3e-35 153.3 101 77.2
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 1.1e-33 148.3 101 76.2
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 2.4e-33 147.1 96 75.0
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 5.9e-32 142.5 74 93.2
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 7.7e-32 142.1 87 79.3
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 5.0e-31 139.4 104 69.2
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 4.2e-30 136.3 78 80.8
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 4.5e-24 116.3 130 50.8
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 1.1e-22 111.7 127 53.5
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 7.2e-22 109.0 124 55.6
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 5.2e-20 102.8 234 31.2
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 8.9e-20 102.1 107 56.1
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 2.2e-18 97.4 285 29.1
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 8.3e-18 95.5 76 68.4
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 1.4e-17 94.7 281 29.5
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 2.4e-17 94.0 74 64.9
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 3.2e-17 93.6 319 26.6
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 2.3e-15 87.4 268 29.9
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.6e-11 73.9 103 46.6
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 2.9e-10 70.5 53 67.9
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 8.3e-10 68.9 191 29.3
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.9e-09 67.8 45 77.8
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 2.3e-07 60.8 42 69.0


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