Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp6g04450 Schrenkiella parvula HOM05D000304 ORTHO05D000185 5.9e-31 137.1 81 100.0
Sp6g04460 Schrenkiella parvula HOM05D000304 ORTHO05D000185 7.0e-24 113.6 81 81.5
BolC3t15936H Brassica oleracea HOM05D000304 ORTHO05D000185 3.5e-23 111.3 82 76.8
A03p30010 Brassica napus HOM05D000304 ORTHO05D000185 7.8e-23 110.2 82 75.6
BraA03t12187Z Brassica rapa HOM05D000304 ORTHO05D000185 7.8e-23 110.2 82 75.6
C03p36270 Brassica napus HOM05D000304 ORTHO05D000185 2.3e-22 108.6 82 79.3
Thhalv10028586m.g Eutrema salsugineum HOM05D000304 ORTHO05D000185 4.0e-19 97.8 83 73.5
BcaB01g02595 Brassica carinata HOM05D000304 ORTHO05D000185 4.4e-18 94.4 82 70.7
CARHR253060 Cardamine hirsuta HOM05D000304 ORTHO05D000185 1.9e-16 89.0 59 81.4
A09p26350 Brassica napus HOM05D000304 ORTHO05D000185 1.0e-14 83.2 57 82.5
BraA09t38208Z Brassica rapa HOM05D000304 ORTHO05D000185 1.0e-14 83.2 57 82.5
BcaB01g01804 Brassica carinata HOM05D000304 ORTHO05D000185 3.9e-14 81.3 81 70.4
AL6G47910 Arabidopsis lyrata HOM05D000304 ORTHO05D000185 2.5e-13 78.6 80 67.5
AL7G31620 Arabidopsis lyrata HOM05D000304 ORTHO05D000185 5.6e-13 77.4 87 59.8
BcaC04g21289 Brassica carinata HOM05D000304 ORTHO05D000185 7.3e-13 77.0 55 80.0
C09p33510 Brassica napus HOM05D000304 ORTHO05D000185 7.3e-13 77.0 55 80.0
BolC9t56187H Brassica oleracea HOM05D000304 ORTHO05D000185 7.3e-13 77.0 55 80.0
C01p16210 Brassica napus HOM05D000304 ORTHO05D000185 4.7e-12 74.3 82 61.0
BolC1t01574H Brassica oleracea HOM05D000304 ORTHO05D000185 4.7e-12 74.3 82 59.8
A01p13410 Brassica napus HOM05D000304 ORTHO05D000185 1.5e-10 69.3 64 65.6
Carub.0006s3224 Capsella rubella HOM05D000304 ORTHO05D000185 7.5e-10 67.0 47 80.9
Carub.0007s1927 Capsella rubella HOM05D000304 ORTHO05D000185 7.5e-10 67.0 61 63.9
Aa31LG6G4040 Aethionema arabicum HOM05D000304 ORTHO05D000185 9.9e-10 66.6 63 63.5
AT4G04450 Arabidopsis thaliana HOM05D000304 ORTHO05D000185 2.9e-09 65.1 47 78.7
THA.LOC104806313 Tarenaya hassleriana HOM05D000304 ORTHO05D000185 6.4e-09 63.9 64 64.1
BraA01t01285Z Brassica rapa HOM05D000304 ORTHO05D000185 1.2e-07 59.7 63 58.7
Thhalv10026864m.g Eutrema salsugineum HOM05D000304 ORTHO05D000185 3.5e-07 58.2 53 64.2
CARHR228870 Cardamine hirsuta HOM05D000304 ORTHO05D000185 1.7e-06 55.8 51 64.7
Sp7g20220 Schrenkiella parvula HOM05D000304 ORTHO05D000185 1.7e-06 55.8 53 62.3
AT4G22070 Arabidopsis thaliana HOM05D000304 ORTHO05D000185 2.3e-06 55.5 53 62.3


User provided reference genes

Program Settings