Gene: AT4G04450
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G04450
- Transcript Identifier AT4G04450.1
- Gene Type Coding gene
- Location Chr4 : 2218379-2221113 : positive
Gene Family Information
- ID HOM05D000304
- #Genes/#Species 1487/96
- Phylogenetic origin
- ID ORTHO05D000185
- #Genes/#Species 1466/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G04450.1
- symbol WRKY42
- uniprot Q9XEC3
Descriptions
- Description WRKY family transcription factor
- Computational description WRKY42; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 31 (TAIR:AT4G22070.1); Has 3599 Blast hits to 3152 proteins in 220 species: Archae - 0; Bacteria - 6; Metazoa - 41; Fungi - 2; Plants - 3474; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | Gene Ontology | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045892 | IMP | Gene Ontology | negative regulation of transcription, DNA-templated | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISS IEA | Gene Ontology | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0043565 | IEA | Gene Ontology | sequence-specific DNA binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0000976 | IDA | Gene Ontology | transcription cis-regulatory region binding | 2 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 3 |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IDA | Gene Ontology | DNA binding | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.22.1 | RNA biosynthesis.transcriptional regulation.WRKY transcription factor activity.transcription factor (WRKY) |