Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp5g04020 Schrenkiella parvula HOM05D006785 ORTHO05D006259 3.9e-67 259.2 305 100.0
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 3.1e-40 169.9 148 72.3
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 8.2e-33 145.2 138 65.9
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 5.9e-31 139.0 156 63.5
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 1.2e-28 131.3 150 60.0
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 6.1e-28 129.0 153 56.2
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 1.0e-27 128.3 108 70.4
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 1.8e-27 127.5 156 59.0
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.9e-21 107.5 150 51.3
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 6.7e-19 99.0 153 48.4
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 2.0e-18 97.4 153 47.7
AL5G40640 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 9.7e-18 95.1 148 52.7
BcaC08g44946 Brassica carinata HOM05D006785 ORTHO05D023842 2.2e-17 94.0 72 75.0
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 2.2e-17 94.0 153 47.1
BraA07t30085Z Brassica rapa HOM05D006785 ORTHO05D023842 4.2e-13 79.7 86 62.8
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 5.7e-10 69.3 156 37.8
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.1e-08 65.1 162 37.7
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 2.4e-08 63.9 154 37.7
BcaC04g21902 Brassica carinata HOM05D016557 ORTHO05D023842 3.1e-08 63.5 47 68.1
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 4.1e-08 63.2 156 35.9
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 2.7e-07 60.5 153 34.0
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 2.7e-07 60.5 153 34.0
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 3.5e-07 60.1 154 35.1
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 3.5e-07 60.1 157 38.2
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 5.9e-07 59.3 155 38.7
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 7.7e-07 58.9 157 36.9
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.9e-06 57.0 155 36.8
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 6.5e-06 55.8 159 37.7
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 6.5e-06 55.8 150 33.3
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 8.6e-06 55.5 151 36.4


User provided reference genes

Program Settings