Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g27680 Schrenkiella parvula HOM05D004437 ORTHO05D005401 3.3e-83 311.6 152 100.0
BcaB02g09022 Brassica carinata HOM05D004437 ORTHO05D005401 1.2e-80 303.1 152 96.7
C04p06550 Brassica napus HOM05D004437 ORTHO05D005401 5.8e-80 300.8 153 97.4
BolC4t22280H Brassica oleracea HOM05D004437 ORTHO05D005401 5.8e-80 300.8 153 97.4
A05p05600 Brassica napus HOM05D004437 ORTHO05D005401 3.2e-78 295.0 154 96.8
CARHR140860 Cardamine hirsuta HOM05D004437 ORTHO05D005401 2.7e-77 292.0 152 93.4
Thhalv10001671m.g Eutrema salsugineum HOM05D004437 ORTHO05D005401 1.0e-76 290.0 152 93.4
Carub.0004s2829 Capsella rubella HOM05D004437 ORTHO05D005401 1.9e-75 285.8 152 90.8
BraA05t19533Z Brassica rapa HOM05D004437 ORTHO05D005401 1.3e-74 283.1 156 92.9
AL4G44810 Arabidopsis lyrata HOM05D004437 ORTHO05D005401 8.1e-74 280.4 152 89.5
AT2G45640 Arabidopsis thaliana HOM05D004437 ORTHO05D005401 2.9e-71 271.9 153 87.6
THA.LOC104802003 Tarenaya hassleriana HOM05D004437 ORTHO05D005401 1.9e-67 259.2 153 85.6
Duzib138G0705 Durio zibethinus HOM05D004437 ORTHO05D005401 2.1e-61 239.2 149 79.9
Gohir.D11G087600 Gossypium hirsutum HOM05D004437 ORTHO05D005401 5.1e-60 234.6 149 78.5
Gohir.A11G083500 Gossypium hirsutum HOM05D004437 ORTHO05D005401 6.7e-60 234.2 149 78.5
Gorai.007G093600 Gossypium raimondii HOM05D004437 ORTHO05D005401 6.7e-60 234.2 149 78.5
Duzib133G0135 Durio zibethinus HOM05D004437 ORTHO05D005401 8.7e-60 233.8 149 79.2
Thecc.01G371500 Theobroma cacao HOM05D004437 ORTHO05D005401 1.9e-59 232.6 149 77.9
Ciclev10022649m.g Citrus clementina HOM05D004437 ORTHO05D005401 2.0e-56 222.6 155 75.5
TAR374G0190 Trochodendron aralioides HOM05D004437 ORTHO05D005401 3.4e-56 221.9 159 72.3
Lj3g0004540 Lotus japonicus HOM05D004437 ORTHO05D005401 1.0e-55 220.3 153 73.9
TWI23G1180 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 2.2e-55 219.2 150 72.7
PGR042G1009 Punica granatum HOM05D004437 ORTHO05D005401 2.9e-55 218.8 153 73.2
BcaC01g05120 Brassica carinata HOM05D004437 ORTHO05D005401 3.8e-55 218.4 120 87.5
Aa31LG1G27110 Aethionema arabicum HOM05D004437 ORTHO05D005401 5.0e-55 218.0 121 88.4
ATR0661G478 Amborella trichopoda HOM05D004437 ORTHO05D005401 5.0e-55 218.0 155 71.0
Dinv43738 Davidia involucrata HOM05D004437 ORTHO05D005401 5.0e-55 218.0 156 73.1
BcaC02g12196 Brassica carinata HOM05D004437 ORTHO05D005401 6.5e-55 217.6 105 100.0
Eucgr.E01334 Eucalyptus grandis HOM05D004437 ORTHO05D005401 6.5e-55 217.6 128 80.5
Nn1g01279 Nelumbo nucifera HOM05D004437 ORTHO05D005401 8.5e-55 217.2 151 73.5
Atru.chr9.1501 Acer truncatum HOM05D004437 ORTHO05D005401 1.4e-54 216.5 148 72.3
QL08p051220 Quercus lobata HOM05D004437 ORTHO05D005401 1.4e-54 216.5 150 75.3
Migut.C00761 Erythranthe guttata HOM05D004437 ORTHO05D005401 1.9e-54 216.1 156 71.8
HanXRQChr06g0169271 Helianthus annuus HOM05D004437 ORTHO05D005401 1.9e-54 216.1 148 73.6
MELO3C014010.2 Cucumis melo HOM05D004437 ORTHO05D005401 2.5e-54 215.7 153 71.9
CsaV3_3G003440 Cucumis sativus L. HOM05D004437 ORTHO05D005401 5.5e-54 214.5 153 71.9
Manes.01G263900 Manihot esculenta HOM05D004437 ORTHO05D005401 9.4e-54 213.8 145 76.6
Aqoxy5G03951 Aquilegia oxysepala HOM05D004437 ORTHO05D005401 1.2e-53 213.4 139 75.5
CiPaw.01G258300 Carya illinoinensis HOM05D004437 ORTHO05D005401 1.2e-53 213.4 149 74.5
Manes.05G042100 Manihot esculenta HOM05D004437 ORTHO05D005401 1.6e-53 213.0 145 75.9
Nitab4.5_0007346g0070 Nicotiana tabacum HOM05D004437 ORTHO05D005401 1.6e-53 213.0 156 71.8
Lsat_1_v5_gn_7_6120 Lactuca sativa HOM05D004437 ORTHO05D005401 2.1e-53 212.6 151 71.5
Solyc05g047690.3 Solanum lycopersicum HOM05D004437 ORTHO05D005401 2.1e-53 212.6 156 71.2
Sopen05g027940 Solanum pennellii HOM05D004437 ORTHO05D005401 2.1e-53 212.6 156 71.2
GSVIVG01027575001 Vitis vinifera HOM05D004437 ORTHO05D005401 3.6e-53 211.8 140 75.0
HanXRQChr04g0122121 Helianthus annuus HOM05D004437 ORTHO05D005401 4.6e-53 211.5 152 71.7
PGSC0003DMG400013695 Solanum tuberosum HOM05D004437 ORTHO05D005401 6.1e-53 211.1 156 71.2
TWI14G0837 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 6.1e-53 211.1 152 70.4
CDE06G2826 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 7.9e-53 210.7 146 72.6
Dinv32406 Davidia involucrata HOM05D004437 ORTHO05D005401 7.9e-53 210.7 154 70.8
RcHm_v2.0_Chr1g0351651 Rosa chinensis HOM05D004437 ORTHO05D005401 1.0e-52 210.3 135 76.3
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 1.4e-52 209.9 153 69.3
Sc22g0000410 Simmondsia chinensis HOM05D004437 ORTHO05D005401 1.8e-52 209.5 125 79.2
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 3.0e-52 208.8 154 68.8
CAN.G1608.2 Capsicum annuum HOM05D004437 ORTHO05D005401 8.8e-52 207.2 157 70.7
CsaV3_3G009410 Cucumis sativus L. HOM05D004437 ORTHO05D005401 8.8e-52 207.2 149 69.8
Actinidia09575 Actinidia chinensis HOM05D004437 ORTHO05D005401 1.1e-51 206.8 155 70.3
Prupe.2G150900 Prunus persica HOM05D004437 ORTHO05D005401 2.6e-51 205.7 143 71.3
Ca_23785_v3 Cicer arietinum L. HOM05D004437 ORTHO05D005401 3.3e-51 205.3 153 69.9
Atru.chr5.365 Acer truncatum HOM05D004437 ORTHO05D005401 4.4e-51 204.9 139 71.9
PSO782G1895 Papaver somniferum HOM05D004437 ORTHO05D005401 4.4e-51 204.9 152 69.7
Peaxi162Scf00988g00110 Petunia axillaris HOM05D004437 ORTHO05D005401 4.4e-51 204.9 152 70.4
Os02g0122000 Oryza sativa ssp. japonica HOM05D004437 ORTHO05D005401 9.7e-51 203.8 153 69.3
FAN04G1903 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.7e-50 203.0 155 67.7
Potri.002G151500 Populus trichocarpa HOM05D004437 ORTHO05D005401 2.2e-50 202.6 152 71.7
MSTRG.25195 Avicennia marina HOM05D004437 ORTHO05D005401 2.8e-50 202.2 127 78.7
CiPaw.12G100900 Carya illinoinensis HOM05D004437 ORTHO05D005401 2.8e-50 202.2 152 68.4
PSO478G3285 Papaver somniferum HOM05D004437 ORTHO05D005401 2.8e-50 202.2 152 70.4
Lalb_Chr10g0097651 Lupinus albus HOM05D004437 ORTHO05D005401 3.7e-50 201.8 144 70.8
MD02G1197700 Malus domestica HOM05D004437 ORTHO05D005401 4.8e-50 201.4 143 74.1
Phvul.010G087700 Phaseolus vulgaris HOM05D004437 ORTHO05D005401 6.3e-50 201.1 151 68.9
Hund14703 Selenicereus undatus HOM05D004437 ORTHO05D005401 6.3e-50 201.1 119 79.8
TAR629G1686 Trochodendron aralioides HOM05D004437 ORTHO05D005401 6.3e-50 201.1 125 76.0
VMungo0331G2039 Vigna mungo HOM05D004437 ORTHO05D005401 6.3e-50 201.1 151 68.9
Lsat_1_v5_gn_7_59201 Lactuca sativa HOM05D004437 ORTHO05D005401 1.1e-49 200.3 160 65.6
FvH4_7g12660 Fragaria vesca HOM05D004437 ORTHO05D005401 1.8e-49 199.5 135 72.6
Psat4g150640 Pisum sativum HOM05D004437 ORTHO05D005401 1.8e-49 199.5 153 67.3
CANSAT21G0327 Cannabis sativa HOM05D004437 ORTHO05D005401 3.1e-49 198.7 122 76.2
Glyma.03G019600 Glycine max HOM05D004437 ORTHO05D005401 3.1e-49 198.7 151 68.2
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea HOM05D004437 ORTHO05D005401 4.1e-49 198.4 154 67.5
Zm00001eb208420 Zea mays HOM05D004437 ORTHO05D005401 4.1e-49 198.4 139 70.5
FAN10G4017 Fragaria x ananassa HOM05D004437 ORTHO05D005401 5.3e-49 198.0 135 71.9
Medtr8g033340 Medicago truncatula HOM05D004437 ORTHO05D005401 5.3e-49 198.0 153 68.0
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea HOM05D004437 ORTHO05D005401 1.5e-48 196.4 154 66.9
FAN10G0783 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.0e-48 196.1 135 71.9
SalBow7G1560 Salvia bowleyana HOM05D004437 ORTHO05D005401 2.0e-48 196.1 148 69.6
Haze_08988 Corylus avellana HOM05D004437 ORTHO05D005401 3.4e-48 195.3 169 62.7
Sed0010224 Sechium edule HOM05D004437 ORTHO05D005401 3.4e-48 195.3 148 66.2
SEGI_23012 Sequoiadendron giganteum HOM05D004437 ORTHO05D005401 3.4e-48 195.3 158 67.1
COL.COLO4_12656 Corchorus olitorius HOM05D004437 ORTHO05D005401 4.5e-48 194.9 149 69.1
FvH4_5g01190 Fragaria vesca HOM05D004437 ORTHO05D005401 4.5e-48 194.9 155 65.2
FAN08G0331 Fragaria x ananassa HOM05D004437 ORTHO05D005401 4.5e-48 194.9 155 65.8
MD04G1070900 Malus domestica HOM05D004437 ORTHO05D005401 4.5e-48 194.9 159 62.9
Cfa012070 Carpinus fangiana HOM05D004437 ORTHO05D005401 7.7e-48 194.1 166 62.0
AUR62017329 Chenopodium quinoa HOM05D004437 ORTHO05D005401 7.7e-48 194.1 145 67.6
Prupe.5G087000 Prunus persica HOM05D004437 ORTHO05D005401 1.3e-47 193.4 150 64.0
Cpa.g.sc18.165 Carica papaya HOM05D004437 ORTHO05D005401 2.2e-47 192.6 116 83.6
ECA236G3516 Erigeron canadensis HOM05D004437 ORTHO05D005401 2.2e-47 192.6 144 68.1
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis HOM05D004437 ORTHO05D005401 2.9e-47 192.2 131 72.5
FAN13G0465 Fragaria x ananassa HOM05D004437 ORTHO05D005401 3.8e-47 191.8 161 64.0
Potri.003G119300 Populus trichocarpa HOM05D004437 ORTHO05D005401 3.8e-47 191.8 123 74.0
RcHm_v2.0_Chr7g0199901 Rosa chinensis HOM05D004437 ORTHO05D005401 6.5e-47 191.0 146 66.4
MSTRG.1255 Avicennia marina HOM05D004437 ORTHO05D005401 1.1e-46 190.3 159 63.5
Cc02_g36970 Coffea canephora HOM05D004437 ORTHO05D005401 1.1e-46 190.3 121 75.2
Hund16975 Selenicereus undatus HOM05D004437 ORTHO05D005401 1.1e-46 190.3 149 67.8
MELO3C006160.2 Cucumis melo HOM05D004437 ORTHO05D005401 1.9e-46 189.5 149 65.8
Pp3c14_24540 Physcomitrium patens HOM05D004437 ORTHO05D005401 2.5e-46 189.1 157 63.1
COL.COLO4_23799 Corchorus olitorius HOM05D004437 ORTHO05D005401 4.2e-46 188.3 155 64.5
SGA_v2.0_scaffold201G41379 Striga asiatica HOM05D000186 ORTHO05D001124 9.4e-46 187.2 119 74.8
CSS0011172 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 1.2e-45 186.8 116 76.7
AUR62010560 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.6e-45 186.4 119 72.3
Mapoly0086s0082 Marchantia polymorpha HOM05D004437 ORTHO05D005401 3.6e-45 185.3 137 67.9
Nitab4.5_0001702g0190 Nicotiana tabacum HOM05D004437 ORTHO05D005401 6.1e-45 184.5 156 66.0
CBR_g4404 Chara braunii HOM05D004437 ORTHO05D005401 7.9e-45 184.1 123 72.4
Potri.014G074000 Populus trichocarpa HOM05D004437 ORTHO05D005401 7.9e-45 184.1 139 67.6
Nitab4.5_0001127g0160 Nicotiana tabacum HOM05D004437 ORTHO05D005401 1.8e-44 183.0 156 64.7
SMO230G0007 Selaginella moellendorffii HOM05D004437 ORTHO05D005401 1.8e-44 183.0 138 68.1
CSS0004475 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 2.3e-44 182.6 114 76.3
SGA_v2.0_scaffold11G05840 Striga asiatica HOM05D000186 ORTHO05D001124 3.0e-44 182.2 118 73.7
vmacro13357 Vaccinium macrocarpon HOM05D004437 ORTHO05D005401 2.0e-43 179.5 213 52.1
ClCG05G001990 Citrullus lanatus HOM05D004437 ORTHO05D005401 2.6e-43 179.1 170 58.8
ClCG00G000160 Citrullus lanatus HOM05D004437 ORTHO05D005401 5.7e-43 177.9 153 62.7
ClCG10G003410 Citrullus lanatus HOM05D004437 ORTHO05D005401 5.7e-43 177.9 153 62.7
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 9.7e-43 177.2 118 73.7
AagrBONN_evm.TU.Sc2ySwM_362.2206 Anthoceros agrestis HOM05D004437 ORTHO05D005401 3.7e-42 175.3 139 65.5
Nitab4.5_0004622g0030 Nicotiana tabacum HOM05D004437 ORTHO05D005401 2.4e-41 172.6 120 69.2
AUR62004271 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.6e-40 169.9 151 61.6
AUR62033386 Chenopodium quinoa HOM05D004437 ORTHO05D005401 2.6e-40 169.1 186 54.3
Zm00001eb230470 Zea mays HOM05D004437 ORTHO05D005401 2.6e-40 169.1 139 64.0
EL10Ac1g00948 Beta vulgaris HOM05D004437 ORTHO05D005401 3.5e-40 168.7 128 68.8
MBI04_g06621_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 3.5e-40 168.7 102 78.4
MBI04_g34692_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 3.5e-40 168.7 102 78.4
Ah.12g057860 Amaranthus hybridus HOM05D004437 ORTHO05D005401 6.5e-39 164.5 164 54.3
DCAR_006889 Daucus carota HOM05D004437 ORTHO05D005401 8.5e-39 164.1 143 62.2
FAN18G0922 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.5e-38 162.5 197 48.7
FAN06G3102 Fragaria x ananassa HOM05D004437 ORTHO05D005401 4.7e-37 158.3 135 61.5
MD00G1131900 Malus domestica HOM05D004437 ORTHO05D005401 8.0e-37 157.5 153 54.2
FAN01G2781 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.3e-36 156.0 135 60.7
FAN06G0648 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.3e-36 156.0 135 60.7
Sabra03G0083300 Salix brachista HOM05D004437 ORTHO05D005401 6.7e-36 154.5 100 74.0
Cre09.g404400 Chlamydomonas reinhardtii HOM05D004437 ORTHO05D005401 8.8e-36 154.1 121 62.0
Sabra01G0086400 Salix brachista HOM05D004437 ORTHO05D005401 8.8e-36 154.1 141 58.9
SHI32178 Sapria himalayana HOM05D004437 ORTHO05D005401 2.8e-34 149.1 134 59.7
Sed0003115 Sechium edule HOM05D004437 ORTHO05D005401 2.0e-32 142.9 101 69.3
HPP92_025880 Vanilla planifolia HOM05D004437 ORTHO05D005401 1.0e-31 140.6 95 70.5
C03p30120 Brassica napus HOM05D004437 ORTHO05D005401 1.3e-31 140.2 77 89.6
TPR.G14692 Trifolium pratense HOM05D004437 ORTHO05D005401 1.7e-31 139.8 126 61.1
BolC3t15361H Brassica oleracea HOM05D004437 ORTHO05D005401 1.1e-30 137.1 77 88.3
BraA03t11727Z Brassica rapa HOM05D004437 ORTHO05D005401 3.2e-30 135.6 77 87.0
Lj9A574G30 Lonicera japonica HOM05D000186 ORTHO05D001124 7.2e-30 134.4 106 64.2
EL10Ac5g12685 Beta vulgaris HOM05D004437 ORTHO05D005401 4.0e-28 128.6 134 50.7
CDE04G2772 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 4.5e-24 115.2 73 76.7
Haze_26096 Corylus avellana HOM05D004437 ORTHO05D005401 1.0e-23 114.0 126 45.2
Haze_16715 Corylus avellana HOM05D004437 ORTHO05D005401 1.9e-22 109.8 77 72.7
Glyma.07G081500 Glycine max HOM05D004437 ORTHO05D005401 2.1e-21 106.3 58 84.5
Zm00001eb230390 Zea mays HOM05D004437 ORTHO05D004372 2.8e-21 105.9 59 79.7
Actinidia31448 Actinidia chinensis HOM05D004437 ORTHO05D005401 1.0e-20 104.0 124 54.0
CAN.G126.10 Capsicum annuum HOM05D004437 ORTHO05D005401 4.0e-20 102.1 64 75.0
Oeu058600.1 Olea europaea HOM05D004437 ORTHO05D005401 2.0e-19 99.8 74 67.6
Glyma.20G186451 Glycine max HOM05D004437 ORTHO05D005401 3.4e-19 99.0 60 78.3
A03p25260 Brassica napus HOM05D004437 ORTHO05D005401 2.2e-18 96.3 64 73.4
DCAR_008576 Daucus carota HOM05D004437 ORTHO05D005401 1.9e-14 83.2 145 38.6
Cfa022890 Carpinus fangiana HOM05D004437 ORTHO05D037942 2.0e-11 73.2 155 33.5
BcaC09g48983 Brassica carinata HOM05D004437 ORTHO05D005401 3.4e-11 72.4 39 84.6
Atru.ctg1434.8 Acer truncatum HOM05D004437 ORTHO05D037942 2.9e-10 69.3 133 31.6


User provided reference genes

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