Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 9.5e-71 270.8 224 100.0
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 2.4e-58 229.6 224 92.4
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 2.7e-57 226.1 224 92.4
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 1.0e-56 224.2 225 92.4
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 1.1e-55 220.7 225 89.3
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 1.1e-55 220.7 225 89.3
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 1.1e-55 220.7 225 89.3
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 5.6e-55 218.4 226 90.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 2.4e-53 213.0 228 90.8
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 8.9e-53 211.1 226 83.6
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 9.9e-52 207.6 229 83.8
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 1.4e-42 177.2 186 94.1
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 1.5e-39 167.2 211 73.9
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 4.9e-35 152.1 227 67.8
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 1.0e-32 144.4 224 66.1
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 2.3e-32 143.3 168 76.2
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 5.6e-31 138.7 172 77.3
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 7.4e-31 138.3 172 76.7
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.6e-30 137.1 227 61.2
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 3.7e-30 136.0 174 74.1
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 4.8e-30 135.6 199 67.8
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 1.1e-29 134.4 224 62.9
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.1e-29 134.4 172 75.6
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 3.1e-29 132.9 174 74.1
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 3.1e-29 132.9 228 61.8
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 3.1e-29 132.9 224 61.6
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 4.0e-29 132.5 232 62.1
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 5.3e-29 132.1 228 62.7
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 5.3e-29 132.1 187 69.5
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 9.0e-29 131.3 219 63.5
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 9.0e-29 131.3 206 65.5
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 9.0e-29 131.3 225 65.3
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.2e-28 131.0 230 63.9
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 1.5e-28 130.6 224 61.2
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.5e-28 130.6 207 67.6
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 2.0e-28 130.2 171 71.3
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 5.8e-28 128.6 228 61.4
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 1.7e-27 127.1 205 65.4
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.2e-27 126.7 227 59.9
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.9e-27 126.3 224 61.6
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 3.8e-27 125.9 172 70.3
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 3.8e-27 125.9 178 70.8
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 3.8e-27 125.9 226 60.6
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 1.1e-26 124.4 224 64.3
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 1.4e-26 124.0 207 62.8
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.9e-26 123.6 226 61.1
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 3.2e-26 122.9 171 73.1
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.2e-26 122.9 171 70.2
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 3.2e-26 122.9 171 73.7
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 3.2e-26 122.9 208 62.0
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 5.5e-26 122.1 229 61.6
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 7.1e-26 121.7 184 68.5
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 1.6e-25 120.6 232 64.7
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 2.1e-25 120.2 224 60.3
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 2.1e-25 120.2 168 69.0
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 2.7e-25 119.8 224 61.2
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 3.5e-25 119.4 229 61.1
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 7.9e-25 118.2 228 58.8
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 1.0e-24 117.9 231 60.2
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 1.0e-24 117.9 234 59.4
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.3e-24 117.5 208 60.1
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 1.8e-24 117.1 172 63.4
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 2.3e-24 116.7 213 60.1
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 6.7e-24 115.2 171 70.8
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 1.5e-23 114.0 171 69.6
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 1.5e-23 114.0 232 59.9
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 2.5e-23 113.2 172 72.1
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 2.5e-23 113.2 174 67.2
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 4.3e-23 112.5 185 63.8
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 5.7e-23 112.1 233 51.1
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 7.4e-23 111.7 165 69.7
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 7.4e-23 111.7 169 74.0
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.6e-22 110.5 170 72.4
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.7e-22 109.4 245 53.1
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 4.8e-22 109.0 172 69.2
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 4.8e-22 109.0 169 73.4
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.2e-22 108.2 224 56.2
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 8.2e-22 108.2 224 56.2
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 1.1e-21 107.8 229 58.1
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 1.1e-21 107.8 179 63.1
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 3.1e-21 106.3 166 70.5
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.1e-21 105.9 224 55.8
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.2e-20 104.4 169 75.7
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 4.5e-20 102.4 202 59.4
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 5.9e-20 102.1 224 55.8
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 1.0e-19 101.3 222 57.7
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 5.0e-19 99.0 214 61.2
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 8.5e-19 98.2 216 58.8
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 8.5e-19 98.2 172 62.8
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 2.7e-17 93.2 159 71.1
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 4.6e-17 92.4 164 59.8
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.3e-16 90.9 108 53.7
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 3.0e-16 89.7 108 55.6
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 3.9e-16 89.4 179 74.3
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 5.1e-16 89.0 110 53.6
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 6.7e-16 88.6 142 73.9
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 6.7e-16 88.6 144 72.9
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.5e-15 87.4 108 50.0
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 1.5e-15 87.4 170 57.1
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 9.7e-15 84.7 104 51.0
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.7e-14 82.8 207 54.6
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 1.8e-13 80.5 173 76.3
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 6.9e-13 78.6 38 94.7
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 9.0e-13 78.2 147 68.0
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.5e-12 77.4 109 51.4
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 2.6e-12 76.6 48 75.0
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 4.5e-12 75.9 37 91.9
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 1.7e-11 73.9 54 68.5
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.7e-11 73.9 96 44.8
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 4.2e-10 69.3 51 70.6
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 2.7e-09 66.6 31 96.8
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 2.0e-07 60.5 37 73.0


User provided reference genes

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