Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 7.1e-298 1026.5 538 100.0
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.0e-232 810.1 541 81.1
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 1.5e-226 789.6 535 80.0
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 2.1e-225 785.8 541 78.9
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 2.1e-225 785.8 544 78.7
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 7.6e-191 671.0 570 70.5
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 3.2e-189 665.6 590 68.3
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.2e-188 663.7 540 72.0
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 4.0e-184 648.7 552 69.0
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 3.7e-169 599.0 462 73.4
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 2.6e-159 566.2 475 71.8
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 7.2e-141 505.0 566 56.5
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.3e-118 431.0 545 49.9
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 6.6e-118 428.7 545 49.7
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.0e-115 421.4 540 49.1
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.8e-115 420.6 560 48.0
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 5.2e-115 419.1 553 47.7
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 9.8e-114 414.8 544 48.7
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.8e-112 410.6 565 48.5
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 1.8e-112 410.6 571 46.8
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 3.5e-111 406.4 554 46.6
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 1.0e-110 404.8 551 48.8
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 2.3e-110 403.7 551 46.3
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 1.9e-109 400.6 545 47.2
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 7.3e-109 398.7 545 47.0
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 3.1e-107 393.3 561 45.1
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 6.8e-107 392.1 535 46.5
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 4.4e-106 389.4 553 45.2
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 4.9e-105 386.0 556 47.5
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 4.1e-104 382.9 567 45.1
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.2e-103 381.3 586 43.7
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 6.0e-103 379.0 536 44.0
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.3e-102 377.9 569 44.1
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 3.6e-100 369.8 552 44.6
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 3.6e-100 369.8 565 43.0
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 4.7e-100 369.4 553 44.1
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.3e-99 367.1 591 43.5
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.3e-99 367.1 565 42.8
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.1e-99 366.7 591 42.0
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 8.9e-99 365.2 552 43.7
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 1.2e-98 364.8 547 44.2
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 3.7e-97 359.8 554 42.6
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 4.9e-97 359.4 611 41.1
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 3.2e-96 356.7 592 41.2
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.2e-96 356.7 473 48.6
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.2e-95 354.8 541 44.0
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 2.7e-95 353.6 514 46.7
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 4.6e-95 352.8 547 44.1
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 1.3e-94 351.3 534 43.6
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 1.9e-93 347.4 547 42.0
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 2.5e-93 347.1 539 40.8
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 4.3e-93 346.3 540 41.9
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 1.2e-92 344.7 535 42.8
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 1.6e-92 344.4 556 40.3
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 6.2e-92 342.4 552 42.9
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 1.1e-91 341.7 593 40.1
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 2.0e-90 337.4 582 40.5
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 3.4e-90 336.7 547 42.2
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 6.4e-89 332.4 547 41.1
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.1e-88 331.6 550 40.9
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 2.7e-87 327.0 539 40.4
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.7e-86 324.3 538 39.4
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.9e-86 323.2 606 40.3
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 5.1e-86 322.8 663 38.6
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 7.3e-85 318.9 534 39.1
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.6e-84 317.8 552 41.3
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 3.1e-83 313.5 610 38.2
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 6.6e-78 295.8 544 38.4
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 6.2e-76 289.3 549 37.9
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 1.8e-75 287.7 556 37.8
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 4.0e-75 286.6 550 35.3
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 2.9e-73 280.4 550 39.3
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 4.6e-71 273.1 538 37.4
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 7.9e-71 272.3 518 36.7
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 2.5e-69 267.3 557 34.8
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 8.1e-68 262.3 388 45.9
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 5.3e-67 259.6 460 40.0
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 5.8e-66 256.1 455 38.7
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 3.7e-60 236.9 563 35.0
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 3.7e-60 236.9 458 35.8
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 7.1e-56 222.6 470 35.3
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.1e-40 172.2 404 32.2
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 4.2e-40 170.2 499 29.3
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 2.7e-39 167.5 556 28.6
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 3.6e-39 167.2 128 65.6
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 8.8e-30 136.0 426 34.0
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 2.4e-27 127.9 443 29.8
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 2.4e-27 127.9 233 35.6
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 4.5e-26 123.6 170 48.2
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 2.2e-25 121.3 365 32.1
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 3.8e-25 120.6 173 46.2
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 5.5e-24 116.7 342 31.3
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.8e-22 111.7 170 43.5
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.8e-22 111.7 170 43.5
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.8e-22 111.7 547 26.3
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.7e-17 95.1 170 40.0
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 1.0e-14 85.9 74 58.1
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 4.1e-11 73.9 753 23.2
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.9e-08 65.1 45 68.9
MBI04_g00304_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 6.1e-07 60.1 104 32.7
Peaxi162Scf00714g00057 Petunia axillaris HOM05D002884 ORTHO05D003178 1.0e-06 59.3 106 29.2
Sc22g0000260 Simmondsia chinensis HOM05D002884 ORTHO05D003178 1.4e-06 58.9 98 32.7
CSS0004594 Camellia sinensis var. sinensis HOM05D002884 ORTHO05D003178 1.8e-06 58.5 103 29.1
CAN.G981.24 Capsicum annuum HOM05D002884 ORTHO05D003178 3.0e-06 57.8 98 30.6
Lalb_Chr09g0321151 Lupinus albus HOM05D002884 ORTHO05D003178 3.0e-06 57.8 98 29.6
Nitab4.5_0002234g0060 Nicotiana tabacum HOM05D002884 ORTHO05D003178 4.0e-06 57.4 98 30.6
Nitab4.5_0002853g0040 Nicotiana tabacum HOM05D002884 ORTHO05D003178 4.0e-06 57.4 98 30.6
Glyma.17G131100 Glycine max HOM05D002884 ORTHO05D003178 5.2e-06 57.0 98 29.6
QL12p017410 Quercus lobata HOM05D002884 ORTHO05D003178 5.2e-06 57.0 98 31.6
Cre03.g200100 Chlamydomonas reinhardtii HOM05D002436 ORTHO05D002754 6.8e-06 56.6 75 41.3
Solyc08g080410.3 Solanum lycopersicum HOM05D002884 ORTHO05D003178 6.8e-06 56.6 96 30.2
Sopen08g028740 Solanum pennellii HOM05D002884 ORTHO05D003178 6.8e-06 56.6 96 30.2
CANSAT21G2344 Cannabis sativa HOM05D002884 ORTHO05D003178 8.8e-06 56.2 97 28.9
Gohir.A09G193001 Gossypium hirsutum HOM05D002884 ORTHO05D003178 8.8e-06 56.2 97 28.9
PSO782G3187 Papaver somniferum HOM05D002884 ORTHO05D003178 8.8e-06 56.2 97 30.9


User provided reference genes

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