Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g14610 Schrenkiella parvula HOM05D003806 ORTHO05D004346 2.0e-301 1039.6 1328 100.0
C04p17390 Brassica napus HOM05D003806 ORTHO05D004346 2.8e-130 471.1 1465 62.1
BcaC02g11341 Brassica carinata HOM05D003806 ORTHO05D001704 1.8e-129 468.4 1464 62.1
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 2.1e-125 454.9 1456 62.0
THA.LOC104800972 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 1.0e-119 436.0 1356 57.8
THA.LOC104816049 Tarenaya hassleriana HOM05D003806 ORTHO05D004346 5.8e-107 393.7 1351 46.0
Aa31LG5G4290 Aethionema arabicum HOM05D003806 ORTHO05D004346 2.1e-104 385.2 1339 63.2
Thhalv10016148m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 2.5e-102 378.3 1341 63.8
CARHR126030 Cardamine hirsuta HOM05D003806 ORTHO05D004346 6.8e-100 370.2 1339 58.8
AL4G27610 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 1.1e-86 326.2 1340 59.6
A05p13020 Brassica napus HOM05D003806 ORTHO05D004346 9.9e-83 313.2 1465 57.2
AT1G05320 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.1e-81 309.7 437 52.6
Ciclev10010914m.g Citrus clementina HOM05D003806 ORTHO05D004346 1.1e-81 309.7 1379 54.7
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 1.4e-81 309.3 1377 45.0
BcaC01g05916 Brassica carinata HOM05D003806 ORTHO05D004346 4.2e-81 307.8 347 61.4
COL.COLO4_33757 Corchorus olitorius HOM05D003806 ORTHO05D004346 7.9e-80 303.5 1377 43.1
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 5.8e-75 287.3 1531 34.6
C03p21110 Brassica napus HOM05D003806 ORTHO05D004346 3.2e-73 281.6 342 60.5
BolC3t14493H Brassica oleracea HOM05D003806 ORTHO05D004346 3.2e-73 281.6 342 60.5
Manes.09G072900 Manihot esculenta HOM05D003806 ORTHO05D004346 3.2e-73 281.6 1385 46.5
BraA05t20242Z Brassica rapa HOM05D003806 ORTHO05D004346 9.3e-73 280.0 1474 53.2
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 1.5e-70 272.7 1381 38.7
A03p18080 Brassica napus HOM05D003806 ORTHO05D004346 2.5e-70 271.9 354 56.8
FAN05G0560 Fragaria x ananassa HOM05D003806 ORTHO05D004346 6.9e-68 263.8 1277 48.2
Carub.0004s1356 Capsella rubella HOM05D003806 ORTHO05D004346 8.4e-66 256.9 1340 61.0
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 3.0e-63 248.4 1340 43.7
Prupe.3G186800 Prunus persica HOM05D003806 ORTHO05D004346 1.9e-62 245.7 1381 40.3
AT2G32240 Arabidopsis thaliana HOM05D003806 ORTHO05D004346 1.1e-60 240.0 1341 59.0
Carub.0001s0463 Capsella rubella HOM05D003806 ORTHO05D004346 3.1e-60 238.4 440 48.6
FAN09G2907 Fragaria x ananassa HOM05D003806 ORTHO05D004346 6.9e-60 237.3 1297 46.8
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 3.4e-59 235.0 1439 42.1
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea HOM05D003806 ORTHO05D004346 1.0e-58 233.4 1387 50.2
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea HOM05D003806 ORTHO05D004346 2.9e-58 231.9 1387 45.9
AL1G15120 Arabidopsis lyrata HOM05D003806 ORTHO05D004346 5.0e-58 231.1 440 51.6
RcHm_v2.0_Chr2g0153621 Rosa chinensis HOM05D003806 ORTHO05D004346 5.0e-58 231.1 1389 42.0
BolC5t29142H Brassica oleracea HOM05D003806 ORTHO05D004346 6.5e-58 230.7 435 41.8
FvH4_6g39571 Fragaria vesca HOM05D003806 ORTHO05D004346 9.3e-57 226.9 1297 47.6
BraA03t11067Z Brassica rapa HOM05D003806 ORTHO05D004346 3.5e-56 224.9 352 52.6
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 7.9e-56 223.8 1389 46.8
Gohir.A07G081500 Gossypium hirsutum HOM05D003806 ORTHO05D004346 1.3e-55 223.0 1382 51.2
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 3.0e-55 221.9 1387 43.8
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 6.7e-55 220.7 1401 39.8
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 2.5e-54 218.8 518 35.5
TWI34G1284 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 9.7e-54 216.9 1380 42.5
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 2.8e-53 215.3 452 55.5
CSS0010582 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.4e-52 213.0 481 46.2
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 1.4e-52 213.0 480 40.8
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 1.8e-52 212.6 1345 41.6
ClCG07G010910 Citrullus lanatus HOM05D003806 ORTHO05D004346 2.4e-52 212.2 512 40.8
Duzib133G0409 Durio zibethinus HOM05D003806 ORTHO05D004346 1.5e-51 209.5 286 48.3
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 1.0e-50 206.8 1390 41.9
PGR031G3264 Punica granatum HOM05D003806 ORTHO05D004346 1.7e-50 206.1 514 38.7
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 1.9e-49 202.6 507 52.5
C05p03650 Brassica napus HOM05D003806 ORTHO05D004346 2.5e-49 202.2 435 42.8
Sabra16G0025500 Salix brachista HOM05D003806 ORTHO05D004346 5.5e-49 201.1 1409 36.8
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 7.2e-49 200.7 1416 45.6
CsaV3_4G007390 Cucumis sativus L. HOM05D003806 ORTHO05D004346 9.4e-49 200.3 513 47.0
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 1.6e-48 199.5 1386 44.9
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 2.1e-48 199.1 1380 37.9
Sabra16G0020700 Salix brachista HOM05D003806 ORTHO05D004346 4.6e-48 198.0 1409 36.7
A10p04030 Brassica napus HOM05D003806 ORTHO05D004346 1.0e-47 196.8 469 38.6
CiPaw.04G076200 Carya illinoinensis HOM05D003806 ORTHO05D004346 3.0e-47 195.3 520 43.5
Atru.chr8.989 Acer truncatum HOM05D003806 ORTHO05D004346 5.1e-47 194.5 1441 39.8
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 2.0e-46 192.6 451 42.1
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 3.3e-46 191.8 1384 46.2
FAN02G2860 Fragaria x ananassa HOM05D003806 ORTHO05D004346 2.2e-45 189.1 1310 43.3
Gohir.D07G087100 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.8e-45 188.7 1381 46.7
Sp1g04190 Schrenkiella parvula HOM05D003806 ORTHO05D004346 1.4e-44 186.4 1347 40.6
DCAR_009841 Daucus carota HOM05D003806 ORTHO05D004346 1.2e-43 183.3 514 34.0
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 1.2e-43 183.3 492 31.7
Gorai.001G093100 Gossypium raimondii HOM05D003806 ORTHO05D004346 1.5e-43 183.0 1381 45.8
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 2.0e-43 182.6 1381 39.2
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 2.6e-43 182.2 1369 42.5
MELO3C016203.2 Cucumis melo HOM05D003806 ORTHO05D004346 4.5e-43 181.4 513 49.9
Potri.006G021200 Populus trichocarpa HOM05D003806 ORTHO05D004346 5.9e-43 181.0 289 46.4
BraA10t42674Z Brassica rapa HOM05D003806 ORTHO05D004346 1.1e-41 176.8 462 40.0
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 3.2e-41 175.3 1381 49.2
Potri.016G018700 Populus trichocarpa HOM05D003806 ORTHO05D004346 3.2e-41 175.3 452 54.4
vmacro08755 Vaccinium macrocarpon HOM05D003806 ORTHO05D004346 9.4e-41 173.7 479 36.5
PSO541G2929 Papaver somniferum HOM05D003806 ORTHO05D004346 2.1e-40 172.6 346 37.3
MBI02_g35832_MAGBIO Magnolia biondii HOM05D003806 ORTHO05D004346 2.7e-40 172.2 1573 33.1
PSO675G3405 Papaver somniferum HOM05D003806 ORTHO05D004346 7.9e-40 170.6 346 36.7
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.4e-39 169.9 512 46.7
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 2.3e-39 169.1 517 36.0
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla HOM05D003806 ORTHO05D004346 5.7e-38 164.5 1377 42.8
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 5.7e-38 164.5 506 45.8
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 6.3e-37 161.0 476 49.2
Dinv08951 Davidia involucrata HOM05D003806 ORTHO05D004346 6.3e-37 161.0 1295 38.3
Lj3g0015803 Lotus japonicus HOM05D003806 ORTHO05D004346 6.3e-37 161.0 1354 43.3
Lalb_Chr19g0139591 Lupinus albus HOM05D003806 ORTHO05D004346 7.0e-36 157.5 482 34.4
Nn7g38253 Nelumbo nucifera HOM05D003806 ORTHO05D004346 7.0e-36 157.5 266 43.2
Sed0016792 Sechium edule HOM05D003806 ORTHO05D004346 3.5e-35 155.2 1569 33.8
MSTRG.6602 Avicennia marina HOM05D003806 ORTHO05D004346 1.0e-34 153.7 280 39.3
HanXRQChr17g0541141 Helianthus annuus HOM05D003806 ORTHO05D004346 1.0e-34 153.7 287 37.6
HanXRQChr06g0171661 Helianthus annuus HOM05D003806 ORTHO05D004346 2.9e-34 152.1 286 39.2
Gohir.A11G156200 Gossypium hirsutum HOM05D003806 ORTHO05D004346 6.5e-34 151.0 285 44.9
Duzib138G1777 Durio zibethinus HOM05D003806 ORTHO05D004346 8.5e-34 150.6 1375 37.7
TWI60G0662 Tripterygium wilfordii HOM05D003806 ORTHO05D004346 4.2e-33 148.3 1373 36.9
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 5.5e-33 147.9 285 44.6
Sed0003037 Sechium edule HOM05D003806 ORTHO05D004346 1.6e-32 146.4 488 35.7
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 2.7e-32 145.6 285 44.2
Psat7g179080 Pisum sativum HOM05D003806 ORTHO05D004346 2.7e-32 145.6 1384 49.3
Lsat_1_v5_gn_3_34740 Lactuca sativa HOM05D003806 ORTHO05D004346 6.1e-32 144.4 450 32.9
CANSAT64G1444 Cannabis sativa HOM05D003806 ORTHO05D004346 1.0e-31 143.7 521 41.5
EL10Ac2g03814 Beta vulgaris HOM05D003806 ORTHO05D004346 4.0e-31 141.7 415 30.4
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.5e-30 139.8 1367 39.2
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 2.6e-30 139.0 471 29.1
Thhalv10006865m.g Eutrema salsugineum HOM05D003806 ORTHO05D004346 3.3e-30 138.7 440 38.2
HPP92_009459 Vanilla planifolia HOM05D003806 ORTHO05D004346 1.7e-29 136.3 472 28.0
CARHR004810 Cardamine hirsuta HOM05D003806 ORTHO05D004346 2.8e-29 135.6 333 42.6
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 2.8e-29 135.6 504 53.0
HanXRQChr15g0470351 Helianthus annuus HOM05D003806 ORTHO05D004346 8.2e-29 134.0 285 36.8
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 8.2e-29 134.0 508 42.1
C08p51770 Brassica napus HOM05D003806 ORTHO05D004346 1.1e-28 133.7 321 40.2
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 1.4e-28 133.3 1388 45.6
TPR.G21252 Trifolium pratense HOM05D003806 ORTHO05D004346 3.1e-28 132.1 406 34.0
FAN14G1588 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.2e-27 130.2 1310 41.5
FAN14G4911 Fragaria x ananassa HOM05D003806 ORTHO05D004346 1.2e-27 130.2 1310 41.5
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 1.1e-25 123.6 485 31.3
Actinidia28585 Actinidia chinensis HOM05D003806 ORTHO05D004346 4.7e-24 118.2 525 27.2
DCAR_013337 Daucus carota HOM05D003806 ORTHO05D004346 4.0e-23 115.2 250 36.0
ECA246G1737 Erigeron canadensis HOM05D003806 ORTHO05D004346 4.0e-23 115.2 258 36.0
BolC8t52706H Brassica oleracea HOM05D003806 ORTHO05D004346 2.0e-22 112.8 316 38.3
Actinidia31596 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.3e-21 110.2 229 38.9
Ca_11242_v3 Cicer arietinum L. HOM05D003806 ORTHO05D004346 3.7e-21 108.6 1392 44.5
CDE05G0051 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 4.8e-21 108.2 293 31.4
Actinidia12513 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.8e-20 106.3 321 32.1
Peaxi162Scf00141g01119 Petunia axillaris HOM05D001948 ORTHO05D001873 1.8e-20 106.3 346 30.1
BcaC09g49104 Brassica carinata HOM05D003806 ORTHO05D004346 7.0e-20 104.4 79 77.2
CANSAT64G1938 Cannabis sativa HOM05D003806 ORTHO05D004346 9.1e-20 104.0 244 40.6
AUR62009108 Chenopodium quinoa HOM05D003806 ORTHO05D004346 9.1e-20 104.0 421 27.3
A09p67490 Brassica napus HOM05D003806 ORTHO05D004346 2.7e-19 102.4 328 34.8
BraA09t42077Z Brassica rapa HOM05D003806 ORTHO05D004346 2.7e-19 102.4 328 34.8
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 3.2e-17 95.5 441 26.5
unitig_85.g27313 Utricularia gibba HOM05D003806 ORTHO05D004346 4.2e-17 95.1 291 29.6
Actinidia12514 Actinidia chinensis HOM05D003806 ORTHO05D004346 1.2e-16 93.6 139 41.7
Aa31LG1G19290 Aethionema arabicum HOM05D003806 ORTHO05D004346 4.7e-16 91.7 132 48.5
Aa31LG1G19380 Aethionema arabicum HOM05D003806 ORTHO05D004346 4.7e-16 91.7 132 48.5
ATR0763G047 Amborella trichopoda HOM05D003806 ORTHO05D004346 1.2e-14 87.0 272 32.0
Hund19432 Selenicereus undatus HOM05D003806 ORTHO05D004346 2.6e-14 85.9 132 40.9
BcaC07g42136 Brassica carinata HOM05D003806 ORTHO05D004346 2.8e-13 82.4 420 30.2
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 3.1e-12 79.0 517 28.4
Migut.M00098 Erythranthe guttata HOM05D003806 ORTHO05D004346 9.2e-12 77.4 440 36.1
Ah.11g044370 Amaranthus hybridus HOM05D003806 ORTHO05D004346 2.7e-11 75.9 186 32.3
AUR62020563 Chenopodium quinoa HOM05D003806 ORTHO05D004346 3.5e-11 75.5 181 47.5
SGA_v2.0_scaffold181G39737 Striga asiatica HOM05D003806 ORTHO05D004346 3.5e-11 75.5 246 35.4
AUR62020559 Chenopodium quinoa HOM05D003806 ORTHO05D004346 5.9e-11 74.7 181 48.1
Aqoxy7G02954 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 1.3e-10 73.6 480 24.8
AUR62043599 Chenopodium quinoa HOM05D003806 ORTHO05D004346 1.3e-10 73.6 161 35.4
Sc23g0004300 Simmondsia chinensis HOM05D003806 ORTHO05D004346 1.3e-10 73.6 247 32.0
AUR62043987 Chenopodium quinoa HOM05D003806 ORTHO05D004346 6.6e-10 71.2 469 24.1
CDE02G3965 Ceratophyllum demersum HOM05D003806 ORTHO05D004346 1.1e-09 70.5 333 25.2
BcaB01g03995 Brassica carinata HOM05D003806 ORTHO05D004346 1.5e-09 70.1 71 73.2
SEGI_03911 Sequoiadendron giganteum HOM05D003806 ORTHO05D002919 2.1e-08 66.2 172 31.4
Sabra06G0015000 Salix brachista HOM05D003806 ORTHO05D004346 4.7e-08 65.1 226 31.0
C01p42510 Brassica napus HOM05D003806 ORTHO05D004346 1.4e-07 63.5 258 27.5
AUR62044057 Chenopodium quinoa HOM05D003806 ORTHO05D004346 4.0e-07 62.0 261 29.5
Os04g0614650 Oryza sativa ssp. japonica HOM05D003806 ORTHO05D004346 5.2e-07 61.6 148 29.1
AUR62044188 Chenopodium quinoa HOM05D003806 ORTHO05D004346 8.9e-07 60.8 261 29.1
SEGI_00522 Sequoiadendron giganteum HOM05D003806 ORTHO05D004346 2.0e-06 59.7 187 28.9


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