Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 0.0e+00 1301.6 675 100.0
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 0.0e+00 1174.8 677 91.3
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 0.0e+00 1146.3 676 88.9
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 0.0e+00 1129.4 677 87.9
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 0.0e+00 1120.1 675 87.3
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 0.0e+00 1094.0 676 86.1
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 0.0e+00 1090.5 675 85.8
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 4.7e-299 1030.8 635 86.8
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 4.4e-289 997.7 599 88.3
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 8.7e-285 983.4 628 84.2
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 6.9e-282 973.8 647 81.6
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 7.7e-241 837.4 708 68.2
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 3.4e-220 768.8 587 68.3
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 2.7e-217 759.2 591 68.7
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 2.7e-217 759.2 585 68.5
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 4.2e-215 751.9 595 68.1
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 1.2e-214 750.4 591 66.8
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 2.1e-214 749.6 586 67.7
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 6.1e-214 748.0 590 68.6
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.4e-213 746.9 566 70.5
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 5.2e-213 745.0 606 66.3
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 1.2e-212 743.8 598 66.9
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 2.0e-212 743.0 587 66.8
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 4.4e-212 741.9 590 68.0
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 5.7e-212 741.5 578 67.1
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 1.1e-210 737.3 600 66.8
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 5.4e-210 734.9 592 65.9
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 2.0e-209 733.0 592 67.2
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 1.0e-208 730.7 577 69.0
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 2.3e-208 729.6 604 66.2
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 6.1e-206 721.5 633 62.6
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 3.0e-205 719.2 599 65.9
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 9.8e-204 714.1 585 64.4
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 1.4e-202 710.3 581 64.7
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 4.1e-202 708.8 595 63.5
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.6e-201 706.8 586 64.8
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 2.0e-201 706.4 628 61.1
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 2.7e-201 706.1 627 62.7
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.1e-199 700.7 584 64.4
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 3.3e-199 699.1 585 66.2
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 9.5e-199 697.6 634 61.5
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 1.6e-198 696.8 603 64.5
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 4.7e-198 695.3 614 63.2
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 6.2e-198 694.9 590 64.7
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 6.2e-198 694.9 603 62.0
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 8.0e-198 694.5 633 60.0
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 1.8e-197 693.3 613 63.1
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 1.8e-197 693.3 604 63.7
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.3e-197 693.0 633 61.1
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 6.8e-197 691.4 589 63.5
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 1.5e-196 690.3 583 64.2
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 3.4e-196 689.1 591 64.1
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 5.8e-196 688.3 579 64.2
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 5.8e-196 688.3 596 61.6
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 9.8e-196 687.6 583 61.7
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 8.3e-195 684.5 614 62.5
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 3.2e-194 682.6 629 60.9
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 4.1e-194 682.2 631 60.1
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 6.0e-193 678.3 615 60.0
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 7.8e-193 677.9 580 62.6
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 1.3e-192 677.2 616 60.7
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 3.0e-192 676.0 579 62.7
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 1.5e-191 673.7 594 61.1
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.6e-190 670.2 583 62.8
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 1.8e-189 666.8 583 61.2
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 2.3e-189 666.4 568 63.2
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 3.1e-189 666.0 583 61.1
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 1.2e-188 664.1 583 62.6
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.9e-186 656.8 597 60.0
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 9.2e-186 654.4 591 61.1
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 2.1e-185 653.3 579 60.1
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 4.6e-185 652.1 593 60.4
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 1.3e-184 650.6 676 54.9
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 5.1e-184 648.7 616 58.4
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 9.5e-183 644.4 594 59.9
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 4.7e-182 642.1 593 59.4
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 2.3e-181 639.8 586 60.4
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 1.2e-180 637.5 602 59.0
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 1.5e-180 637.1 610 58.2
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 1.3e-179 634.0 598 58.0
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.1e-178 630.9 466 68.5
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 2.1e-177 626.7 609 56.5
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 8.6e-176 621.3 608 56.4
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.1e-175 620.9 595 57.1
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.2e-174 617.5 591 59.7
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 8.1e-174 614.8 576 58.7
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 4.4e-172 609.0 447 70.9
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 7.6e-172 608.2 524 63.5
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 2.2e-171 606.7 576 56.1
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 4.2e-170 602.4 581 56.8
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 1.1e-167 594.3 437 70.7
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 9.9e-164 581.3 549 56.8
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 1.9e-162 577.0 611 54.3
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 3.5e-161 572.8 608 53.5
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 3.2e-154 549.7 549 58.3
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 9.0e-149 531.6 285 91.9
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 1.5e-148 530.8 576 50.5
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 2.2e-147 526.9 546 55.1
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 1.8e-125 454.1 611 46.0
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 3.9e-83 313.5 632 36.4
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 3.9e-83 313.5 632 36.4
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 1.1e-74 285.4 446 38.6
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.3e-59 235.3 139 86.3
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 8.7e-59 232.6 577 31.7
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 9.3e-37 159.5 235 42.1
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 9.3e-29 132.9 194 43.3
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 3.9e-19 100.9 129 41.9
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 1.3e-17 95.9 212 31.6
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 3.2e-13 81.3 295 27.8
Aa31LG5G5140 Aethionema arabicum HOM05D006787 ORTHO05D008366 3.6e-12 77.8 80 52.5
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 6.1e-12 77.0 92 47.8
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 1.8e-11 75.5 112 32.1
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 2.3e-11 75.1 213 30.5
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 1.1e-10 72.8 395 25.6
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.6e-10 71.6 99 47.5
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 6.3e-09 67.0 200 30.0
C04p61480 Brassica napus HOM05D064627 ORTHO05D042256 1.7e-06 58.9 33 84.8
BolC4t27633H Brassica oleracea HOM05D064627 ORTHO05D042256 1.7e-06 58.9 33 84.8


User provided reference genes

Program Settings