Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 4.9e-178 627.9 355 100.0
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 2.8e-141 505.8 361 82.3
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 4.6e-136 488.4 362 83.4
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 6.2e-133 478.0 372 79.3
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 2.9e-130 469.2 368 76.9
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 1.2e-128 463.8 362 77.3
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 3.5e-128 462.2 358 79.1
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 6.0e-128 461.5 354 78.8
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 9.0e-124 447.6 352 78.1
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 8.4e-122 441.0 357 79.0
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 2.5e-121 439.5 371 77.9
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 5.5e-113 411.8 356 69.7
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 4.5e-107 392.1 325 78.5
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 1.2e-96 357.5 290 67.2
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 1.4e-79 300.8 289 58.8
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 3.4e-78 296.2 290 55.2
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.4e-76 290.0 290 56.9
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 7.0e-76 288.5 289 57.4
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 2.0e-75 287.0 367 52.3
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 2.0e-75 287.0 287 59.2
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 1.9e-73 280.4 291 56.0
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 2.7e-72 276.6 290 55.2
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 8.0e-72 275.0 366 51.6
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 1.8e-71 273.9 288 53.8
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 1.8e-71 273.9 301 53.8
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 6.8e-71 271.9 284 53.5
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 8.8e-71 271.6 358 48.6
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.2e-70 271.2 343 53.4
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 1.5e-70 270.8 355 51.3
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 3.4e-70 269.6 293 53.6
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 4.4e-70 269.2 284 52.8
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 7.5e-70 268.5 283 55.1
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 2.2e-69 266.9 274 55.1
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 6.3e-69 265.4 293 51.2
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 1.1e-68 264.6 289 54.3
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 1.1e-68 264.6 353 45.9
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 2.4e-68 263.5 276 54.0
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 7.0e-68 261.9 367 53.7
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 9.1e-68 261.5 288 53.5
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 1.3e-66 257.7 289 51.2
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.3e-66 256.9 288 52.8
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.0e-66 255.8 316 50.6
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 6.6e-66 255.4 372 46.0
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 6.6e-66 255.4 288 52.4
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 8.6e-66 255.0 287 52.6
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 1.1e-65 254.6 300 49.3
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.5e-65 254.2 287 52.6
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 4.7e-64 249.2 301 47.8
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.3e-63 246.9 298 49.3
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 3.0e-63 246.5 294 49.7
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 4.0e-63 246.1 288 49.7
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 5.2e-63 245.7 267 51.3
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 6.8e-63 245.4 371 49.3
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 1.5e-62 244.2 284 50.0
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 1.5e-62 244.2 272 53.7
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 1.5e-62 244.2 288 50.0
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 2.0e-62 243.8 288 50.7
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 2.6e-62 243.4 295 47.5
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 4.4e-62 242.7 282 50.4
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.4e-62 242.7 312 45.5
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.3e-61 241.1 295 49.2
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 1.7e-61 240.7 291 49.1
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 2.2e-61 240.4 287 46.3
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 2.2e-61 240.4 315 48.9
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 2.8e-61 240.0 277 49.1
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 6.3e-61 238.8 281 48.0
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 1.8e-60 237.3 378 47.6
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 5.4e-60 235.7 288 49.0
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.6e-59 234.2 302 46.0
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.0e-59 233.8 371 45.8
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 4.5e-59 232.6 279 50.2
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 5.9e-59 232.3 287 47.7
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 7.8e-59 231.9 286 50.0
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 1.3e-58 231.1 291 47.1
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 2.9e-58 229.9 290 46.9
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 2.9e-58 229.9 256 52.7
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 6.6e-58 228.8 283 48.4
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 4.7e-56 222.6 278 47.8
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.4e-55 221.1 497 33.4
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 6.8e-55 218.8 274 48.5
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 3.4e-54 216.5 283 44.9
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 4.4e-54 216.1 354 47.5
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 5.8e-54 215.7 269 49.4
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 7.5e-54 215.3 351 42.2
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 9.8e-54 214.9 366 46.4
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 8.3e-53 211.8 216 52.8
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 8.3e-53 211.8 254 50.0
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 1.1e-52 211.5 271 46.5
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 1.4e-52 211.1 258 50.8
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 3.2e-52 209.9 325 41.2
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 5.4e-52 209.1 287 44.3
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 9.2e-52 208.4 287 44.9
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 4.6e-51 206.1 269 47.6
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 7.8e-51 205.3 222 52.7
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 1.3e-50 204.5 297 43.8
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 3.0e-50 203.4 284 43.0
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 3.6e-48 196.4 291 41.9
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 6.2e-48 195.7 350 38.0
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 1.8e-47 194.1 241 46.5
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 2.3e-47 193.7 348 38.5
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 5.8e-46 189.1 286 42.3
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 8.3e-45 185.3 344 37.5
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.4e-44 184.5 277 41.2
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 3.0e-42 176.8 165 58.8
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 1.9e-41 174.1 175 53.7
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 8.9e-39 165.2 222 42.3
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 9.9e-38 161.8 259 42.9
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 5.4e-36 156.0 283 44.5
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 2.1e-35 154.1 191 47.6
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 3.3e-33 146.7 209 49.8
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 4.7e-32 142.9 209 48.8
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 4.0e-31 139.8 276 37.3
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 8.9e-31 138.7 261 37.5
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 9.9e-30 135.2 245 33.9
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 1.6e-27 127.9 103 73.8
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 6.0e-27 125.9 169 45.6
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 2.3e-26 124.0 201 40.3
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 6.6e-26 122.5 294 35.7
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 2.3e-18 97.4 83 56.6
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 1.5e-17 94.7 285 29.1
Sp6g37300 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.9e-17 94.4 187 41.2
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 2.5e-17 94.0 93 52.7
A04p23050 Brassica napus HOM05D006271 ORTHO05D023853 1.8e-15 87.8 208 39.9
BcaB05g24172 Brassica carinata HOM05D000064 ORTHO05D094673 6.0e-11 72.8 142 43.0
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 3.0e-10 70.5 205 29.8
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 5.1e-10 69.7 205 29.8
BcaC02g08034 Brassica carinata HOM05D006271 ORTHO05D023853 1.8e-07 61.2 120 40.0
BraA04t17838Z Brassica rapa HOM05D006271 ORTHO05D023853 4.0e-07 60.1 107 43.9


User provided reference genes

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