Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g08780 Schrenkiella parvula HOM05D000003 ORTHO05D000004 9.3e-184 646.7 327 100.0
BcaB01g06093 Brassica carinata HOM05D000003 ORTHO05D001498 2.4e-22 110.5 134 42.5
AL5G20730 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 5.0e-20 102.8 136 39.7
BcaC04g23343 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-19 100.9 100 48.0
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 3.4e-16 90.1 134 40.3
BcaB05g22683 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-14 85.1 111 44.1
BcaC03g14446 Brassica carinata HOM05D000003 ORTHO05D001498 4.1e-14 83.2 110 40.0
BolC1t04159H Brassica oleracea HOM05D000003 ORTHO05D011793 1.2e-13 81.6 80 45.0
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 5.9e-13 79.3 136 30.9
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 1.0e-12 78.6 137 32.8
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 1.7e-12 77.8 136 30.1
BcaB01g01579 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-12 77.0 139 32.4
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-12 77.0 138 34.1
BcaC06g36381 Brassica carinata HOM05D000003 ORTHO05D000006 2.9e-12 77.0 100 36.0
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 5.0e-12 76.3 137 29.9
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 5.0e-12 76.3 136 30.1
Aa31LG3G18440 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-12 75.5 162 32.1
BcaNung02475 Brassica carinata HOM05D000003 ORTHO05D001498 4.2e-11 73.2 113 38.9
Aa31LG9G1250 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.2e-11 72.4 137 32.1
BcaC04g23534 Brassica carinata HOM05D000003 ORTHO05D000411 7.2e-11 72.4 141 29.1
BcaC01g03350 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-10 71.2 115 39.1
Aa31sc480G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.1e-10 70.9 137 32.1
BcaC07g37731 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-10 70.9 154 31.8
BcaC04g20578 Brassica carinata HOM05D000003 ORTHO05D001498 2.8e-10 70.5 113 36.3
BcaC09g49394 Brassica carinata HOM05D000003 ORTHO05D000411 4.7e-10 69.7 139 30.9
Aa31LG8G8810 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.1e-10 69.3 113 36.3
BcaC09g50587 Brassica carinata HOM05D000003 ORTHO05D001498 6.1e-10 69.3 152 27.6
Aa31LG3G7040 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.0e-10 68.9 104 34.6
Aa31LG7G13940 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-09 68.2 137 32.8
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-09 68.2 137 30.7
BcaB01g04400 Brassica carinata HOM05D000003 ORTHO05D000411 1.8e-09 67.8 140 30.7
BcaB02g10705 Brassica carinata HOM05D000003 ORTHO05D000004 1.8e-09 67.8 79 45.6
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-09 67.8 136 33.1
Aa31LG8G12510 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-09 67.4 99 33.3
BcaB06g27718 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-09 67.4 129 34.9
BcaB08g35581 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-09 67.4 94 35.1
BcaC03g16750 Brassica carinata HOM05D000003 ORTHO05D012821 2.3e-09 67.4 101 41.6
BolC7t41060H Brassica oleracea HOM05D000003 ORTHO05D001498 4.0e-09 66.6 72 44.4
Aa31LG2G13330 Aethionema arabicum HOM05D000003 ORTHO05D001091 5.2e-09 66.2 147 29.9
Aa31LG8G11590 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.8e-09 65.9 105 32.4
BcaB01g00479 Brassica carinata HOM05D000003 ORTHO05D004851 6.8e-09 65.9 132 32.6
BolC3t18634H Brassica oleracea HOM05D000003 ORTHO05D001498 6.8e-09 65.9 127 29.1
Sp1g31060 Schrenkiella parvula HOM05D000003 ORTHO05D000004 8.9e-09 65.5 138 32.6
Aa31sc85G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.0e-08 64.3 138 31.9
BcaB02g11065 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-08 64.3 222 27.5
BcaC03g14322 Brassica carinata HOM05D000003 ORTHO05D001498 2.0e-08 64.3 110 33.6
BolC8t47524H Brassica oleracea HOM05D000003 ORTHO05D000004 2.0e-08 64.3 149 30.2
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 2.6e-08 63.9 113 31.0
Aa31LG4G14400 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.6e-08 63.9 103 32.0
Aa31sc180G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.4e-08 63.5 139 26.6
BcaC03g17123 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-08 63.5 131 36.6
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-08 63.2 162 29.6
Aa31sc98G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-08 63.2 137 28.5
BolC5t30059H Brassica oleracea HOM05D000003 ORTHO05D000004 4.4e-08 63.2 97 34.0
Thecc.02G206100 Theobroma cacao HOM05D000003 ORTHO05D000004 4.4e-08 63.2 101 33.7
Aa31LG2G14760 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-08 62.8 102 32.4
Aa31LG7G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-08 62.8 102 32.4
Aa31sc165G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.7e-08 62.8 113 29.2
QL05p058297 Quercus lobata HOM05D008329 ORTHO05D010502 5.7e-08 62.8 96 33.3
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 7.5e-08 62.4 136 32.4
BcaC03g14667 Brassica carinata HOM05D000003 ORTHO05D000004 7.5e-08 62.4 138 32.6
CiPaw.06G052300 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.5e-08 62.4 116 32.8
RcHm_v2.0_Chr4g0398671 Rosa chinensis HOM05D000003 ORTHO05D010102 7.5e-08 62.4 100 35.0
BcaB05g25247 Brassica carinata HOM05D000003 ORTHO05D000411 9.8e-08 62.0 106 37.7
BcaB06g26282 Brassica carinata HOM05D000003 ORTHO05D000004 9.8e-08 62.0 138 31.9
BcaC06g35181 Brassica carinata HOM05D000003 ORTHO05D000004 9.8e-08 62.0 137 31.4
BcaC06g36308 Brassica carinata HOM05D000003 ORTHO05D001091 9.8e-08 62.0 111 35.1
BolC3t18275H Brassica oleracea HOM05D000003 ORTHO05D001498 9.8e-08 62.0 100 35.0
BolC7t42403H Brassica oleracea HOM05D000003 ORTHO05D001498 9.8e-08 62.0 100 34.0
Aa31LG2G18130 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.3e-07 61.6 109 32.1
BolC7t42817H Brassica oleracea HOM05D000003 ORTHO05D000004 1.3e-07 61.6 137 32.1
BraA08t33531Z Brassica rapa HOM05D000003 ORTHO05D000004 1.3e-07 61.6 105 31.4
Atru.chr5.449 Acer truncatum HOM05D000003 ORTHO05D000004 1.7e-07 61.2 113 29.2
Aa31LG6G15010 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.7e-07 61.2 108 30.6
Aa31LG10G11530 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 60.8 138 29.0
Aa31LG8G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-07 60.8 141 29.1
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 2.2e-07 60.8 137 31.4
Aa31LG4G7560 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-07 60.5 158 27.8
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.9e-07 60.5 133 32.3
FvH4_5g12241 Fragaria vesca HOM05D000003 ORTHO05D000004 2.9e-07 60.5 139 31.7
Sed0018752 Sechium edule HOM05D000003 ORTHO05D000167 2.9e-07 60.5 106 30.2
SGA_v2.0_scaffold104G30166 Striga asiatica HOM05D000003 ORTHO05D000004 2.9e-07 60.5 138 29.0
Aa31LG2G18910 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.7e-07 60.1 139 28.8
Aa31LG2G19820 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.7e-07 60.1 101 32.7
Aa31LG3G5250 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.7e-07 60.1 100 34.0
BcaB08g34297 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-07 60.1 141 29.8
BcaC04g20486 Brassica carinata HOM05D000003 ORTHO05D001498 3.7e-07 60.1 140 27.1
BraA06t25657Z Brassica rapa HOM05D000003 ORTHO05D000004 3.7e-07 60.1 141 30.5
Sp6g06080 Schrenkiella parvula HOM05D000003 ORTHO05D001498 3.7e-07 60.1 106 35.8
BolC5t31874H Brassica oleracea HOM05D001350 ORTHO05D001091 4.9e-07 59.7 132 25.0
CANSAT56G2394 Cannabis sativa HOM05D000003 ORTHO05D000004 4.9e-07 59.7 113 31.0
FvH4_4g08194 Fragaria vesca HOM05D000003 ORTHO05D000004 4.9e-07 59.7 99 37.4
Atru.chr6.1671 Acer truncatum HOM05D000003 ORTHO05D000004 6.4e-07 59.3 103 31.1
Aa31sc2056G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.4e-07 59.3 158 27.2
Atru.chr6.242 Acer truncatum HOM05D000003 ORTHO05D000006 8.3e-07 58.9 95 33.7
Aa31LG11G5340 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-07 58.9 138 29.0
BcaB01g02064 Brassica carinata HOM05D000496 ORTHO05D000411 8.3e-07 58.9 142 31.7
BcaC07g39692 Brassica carinata HOM05D000003 ORTHO05D001091 8.3e-07 58.9 137 31.4
Atru.chr5.3359 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-06 58.5 108 31.5
Aa31LG8G11140 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-06 58.5 105 28.6
BcaC05g29655 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 58.5 99 34.3
BcaC08g47082 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 58.5 131 30.5
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 58.2 113 30.1
Atru.chr12.386 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 58.2 171 31.0
Atru.chr7.1974 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-06 58.2 101 29.7
Aa31LG11G5960 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-06 58.2 138 29.0
Aa31LG6G14460 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-06 58.2 145 29.0
Aa31sc23G110 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-06 58.2 106 30.2
Aa31sc61G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-06 58.2 100 34.0
FvH4_3g26221 Fragaria vesca HOM05D000003 ORTHO05D000004 1.4e-06 58.2 116 34.5
Atru.chr2.1908 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 57.8 132 31.1
Atru.chr5.1666 Acer truncatum HOM05D000003 ORTHO05D000004 1.8e-06 57.8 100 33.0
Aa31sc759G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-06 57.8 101 27.7
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-06 57.8 141 29.1
BolC2t10842H Brassica oleracea HOM05D000003 ORTHO05D001091 1.8e-06 57.8 101 34.7
AUR62018115 Chenopodium quinoa HOM05D000003 ORTHO05D000004 1.8e-06 57.8 161 24.8
FvH4_4g24131 Fragaria vesca HOM05D000003 ORTHO05D015112 1.8e-06 57.8 138 31.2
Prupe.6G087800 Prunus persica HOM05D000003 ORTHO05D000004 1.8e-06 57.8 149 30.2
Aa31LG2G18830 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.4e-06 57.4 137 29.9
BcaC07g37730 Brassica carinata HOM05D000496 ORTHO05D000411 2.4e-06 57.4 98 36.7
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 2.4e-06 57.4 139 30.2
BraA02t07551Z Brassica rapa HOM05D000003 ORTHO05D000004 2.4e-06 57.4 137 29.2
Sed0012627 Sechium edule HOM05D000003 ORTHO05D000004 2.4e-06 57.4 104 31.7
Atru.chr10.298 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 57.0 108 31.5
Atru.chr2.678 Acer truncatum HOM05D000003 ORTHO05D000004 3.2e-06 57.0 98 32.7
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-06 57.0 140 30.0
BcaC09g51489 Brassica carinata HOM05D000003 ORTHO05D000411 3.2e-06 57.0 106 33.0
BraA04t16803Z Brassica rapa HOM05D000003 ORTHO05D001498 3.2e-06 57.0 137 31.4
CANSAT54G1058 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-06 57.0 113 31.0
AUR62033545 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.2e-06 57.0 104 30.8
FvH4_3g18961 Fragaria vesca HOM05D000003 ORTHO05D000004 3.2e-06 57.0 102 35.3
Atru.chr12.2225 Acer truncatum HOM05D000003 ORTHO05D000004 4.1e-06 56.6 122 32.0
Aa31sc387G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.1e-06 56.6 141 31.9
BcaB07g33683 Brassica carinata HOM05D000003 ORTHO05D000006 4.1e-06 56.6 98 31.6
FvH4_4g13062 Fragaria vesca HOM05D000003 ORTHO05D011454 4.1e-06 56.6 120 30.0
FvH4_5g04240 Fragaria vesca HOM05D000003 ORTHO05D000004 4.1e-06 56.6 104 32.7
RcHm_v2.0_Chr7g0182091 Rosa chinensis HOM05D000003 ORTHO05D000004 4.1e-06 56.6 100 36.0
Aa31LG3G5890 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-06 56.2 101 27.7
Aa31LG7G12870 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-06 56.2 104 29.8
Aa31sc174G30 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-06 56.2 104 31.7
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-06 56.2 138 29.0
Aa31sc380G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-06 56.2 138 26.8
AT4G29090 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 5.4e-06 56.2 139 25.9
BcaC02g10623 Brassica carinata HOM05D003757 ORTHO05D004892 5.4e-06 56.2 105 27.6
BcaC06g36253 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-06 56.2 141 26.2
BcaNung00070 Brassica carinata HOM05D000496 ORTHO05D000411 5.4e-06 56.2 139 28.8
Atru.chr12.2439 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-06 55.8 113 34.5
Aa31LG1G4960 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-06 55.8 144 33.3
Aa31LG3G3520 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-06 55.8 101 33.7
Aa31sc128G60 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-06 55.8 104 31.7
Aa31sc407G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.0e-06 55.8 99 38.4
CiPaw.16G076300 Carya illinoinensis HOM05D000003 ORTHO05D000004 7.0e-06 55.8 101 28.7
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 7.0e-06 55.8 102 33.3
Atru.chr7.658 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-06 55.5 94 31.9
Atru.chr9.813 Acer truncatum HOM05D000003 ORTHO05D000004 9.2e-06 55.5 133 27.8
Aa31LG10G9450 Aethionema arabicum HOM05D000003 ORTHO05D001091 9.2e-06 55.5 115 29.6
QL08p047630 Quercus lobata HOM05D000003 ORTHO05D000004 9.2e-06 55.5 95 33.7


User provided reference genes

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