Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp4g05520 Schrenkiella parvula HOM05D000888 ORTHO05D011624 2.7e-35 151.4 72 100.0
BolC4t26977H Brassica oleracea HOM05D000888 ORTHO05D011624 4.2e-28 127.5 70 84.3
BolC4t26979H Brassica oleracea HOM05D000888 ORTHO05D011624 7.9e-27 123.2 70 81.4
BcaB06g27991 Brassica carinata HOM05D000888 ORTHO05D000740 6.7e-26 120.2 68 79.4
A04p19030 Brassica napus HOM05D000888 ORTHO05D011624 1.9e-25 118.6 70 80.0
BraA04t17502Z Brassica rapa HOM05D000888 ORTHO05D011624 1.9e-25 118.6 70 80.0
BcaC02g08430 Brassica carinata HOM05D000888 ORTHO05D011624 2.5e-25 118.2 70 78.6
C04p54320 Brassica napus HOM05D000888 ORTHO05D000740 2.5e-25 118.2 70 78.6
BraA09t41009Z Brassica rapa HOM05D000888 ORTHO05D000740 9.3e-20 99.8 71 66.2
BcaC07g40911 Brassica carinata HOM05D000888 ORTHO05D011624 1.2e-19 99.4 71 64.8
AL4G15350 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.6e-19 97.4 71 64.8
AT2G24680 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.3e-18 95.9 71 64.8
AL4G15330 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.8e-18 95.5 71 67.6
Thhalv10029137m.g Eutrema salsugineum HOM05D000888 ORTHO05D011624 5.1e-18 94.0 71 63.4
AT2G24650 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.1e-17 92.8 71 64.8
CARHR117170 Cardamine hirsuta HOM05D000888 ORTHO05D011624 1.5e-17 92.4 69 62.3
BcaC07g40916 Brassica carinata HOM05D000888 ORTHO05D011624 1.9e-17 92.0 69 59.4
Sp4g03640 Schrenkiella parvula HOM05D000888 ORTHO05D011624 2.5e-17 91.7 67 62.7
Thhalv10000010m.g Eutrema salsugineum HOM05D000888 ORTHO05D011624 4.3e-17 90.9 67 61.2
Carub.0004s0408 Capsella rubella HOM05D000888 ORTHO05D011624 5.7e-17 90.5 71 62.0
AL4G15370 Arabidopsis lyrata HOM05D000888 ORTHO05D011624 7.4e-17 90.1 69 62.3
Carub.0004s0411 Capsella rubella HOM05D000888 ORTHO05D011624 7.4e-17 90.1 69 60.9
CARHR117270 Cardamine hirsuta HOM05D000888 ORTHO05D011624 9.7e-17 89.7 69 59.4
Carub.0004s0409 Capsella rubella HOM05D000888 ORTHO05D000740 1.6e-16 89.0 70 61.4
Carub.0004s0406 Capsella rubella HOM05D000888 ORTHO05D000740 2.2e-16 88.6 70 61.4
Thhalv10000028m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.2e-16 88.6 71 59.2
AT2G24690 Arabidopsis thaliana HOM05D000888 ORTHO05D011624 3.7e-16 87.8 69 60.9
CARHR117190 Cardamine hirsuta HOM05D000888 ORTHO05D000740 8.2e-16 86.7 69 58.0
AL4G15380 Arabidopsis lyrata HOM05D000888 ORTHO05D011624 1.1e-15 86.3 77 53.2
BraA09t41014Z Brassica rapa HOM05D002682 ORTHO05D002878 1.8e-15 85.5 67 55.2
BcaC01g04888 Brassica carinata HOM05D000888 ORTHO05D011624 4.1e-15 84.3 67 58.2
A03p27150 Brassica napus HOM05D000888 ORTHO05D011624 4.1e-15 84.3 67 58.2
C03p32620 Brassica napus HOM05D000888 ORTHO05D011624 4.1e-15 84.3 67 58.2
BolC3t15600H Brassica oleracea HOM05D000888 ORTHO05D011624 4.1e-15 84.3 67 58.2
Thhalv10000097m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 5.3e-15 84.0 76 56.6
BcaB01g02996 Brassica carinata HOM05D000888 ORTHO05D011624 9.0e-15 83.2 65 58.5
BraA03t11929Z Brassica rapa HOM05D000888 ORTHO05D011624 9.0e-15 83.2 67 56.7
AT2G24681 Arabidopsis thaliana HOM05D000888 ORTHO05D011624 5.9e-14 80.5 66 56.1
BcaB01g02994 Brassica carinata HOM05D000888 ORTHO05D011624 5.9e-14 80.5 69 59.4
Carub.0004s0416 Capsella rubella HOM05D000888 ORTHO05D000740 1.3e-13 79.3 71 54.9
AT2G24696 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 1.7e-13 79.0 71 54.9
A09p56140 Brassica napus HOM05D000888 ORTHO05D000740 1.7e-13 79.0 70 55.7
BraA09t41010Z Brassica rapa HOM05D000888 ORTHO05D000740 1.7e-13 79.0 70 55.7
C08p39110 Brassica napus HOM05D000888 ORTHO05D000740 2.9e-13 78.2 70 55.7
BolC8t51484H Brassica oleracea HOM05D000888 ORTHO05D000740 2.9e-13 78.2 70 55.7
Thhalv10000579m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 5.0e-13 77.4 55 67.3
CARHR178010 Cardamine hirsuta HOM05D000888 ORTHO05D011624 8.5e-13 76.6 60 58.3
CARHR117150 Cardamine hirsuta HOM05D000888 ORTHO05D000740 3.2e-12 74.7 71 53.5
AL4G15400 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 4.2e-12 74.3 69 53.6
BcaB01g02993 Brassica carinata HOM05D000888 ORTHO05D011624 2.3e-10 68.6 62 54.8
CARHR117160 Cardamine hirsuta HOM05D000888 ORTHO05D011624 2.0e-09 65.5 72 47.2
Sp1g22120 Schrenkiella parvula HOM05D000888 ORTHO05D000740 2.0e-09 65.5 70 52.9
BcaB03g12713 Brassica carinata HOM05D000888 ORTHO05D000740 3.3e-09 64.7 72 45.8
A08p18500 Brassica napus HOM05D000888 ORTHO05D000740 4.3e-09 64.3 72 44.4
CARHR239590 Cardamine hirsuta HOM05D000888 ORTHO05D000740 2.8e-08 61.6 72 47.2
Sp7g29510 Schrenkiella parvula HOM05D000888 ORTHO05D000740 3.7e-08 61.2 70 42.9
Thhalv10000130m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 2.4e-07 58.5 59 49.2
BolC8t51488H Brassica oleracea HOM05D000888 ORTHO05D002878 4.1e-07 57.8 56 51.8
Carub.0004s0418 Capsella rubella HOM05D000888 ORTHO05D000740 5.3e-07 57.4 61 49.2
BcaB01g02997 Brassica carinata HOM05D000888 ORTHO05D000740 6.9e-07 57.0 71 43.7
A09p56180 Brassica napus HOM05D002682 ORTHO05D002878 6.9e-07 57.0 56 50.0
C03p32350 Brassica napus HOM05D000888 ORTHO05D000740 6.9e-07 57.0 71 43.7
BolC3t15577H Brassica oleracea HOM05D000888 ORTHO05D000740 6.9e-07 57.0 71 43.7
Sp4g03670 Schrenkiella parvula HOM05D000888 ORTHO05D000740 9.1e-07 56.6 71 43.7
Thhalv10009500m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 1.2e-06 56.2 57 52.6
BcaC06g35129 Brassica carinata HOM05D000888 ORTHO05D000740 2.6e-06 55.1 72 45.8
BcaC05g26398 Brassica carinata HOM05D000888 ORTHO05D000740 3.4e-06 54.7 71 46.5
BolC5t31165H Brassica oleracea HOM05D000888 ORTHO05D000740 3.4e-06 54.7 71 46.5
BcaB04g18619 Brassica carinata HOM05D000888 ORTHO05D000740 4.5e-06 54.3 72 45.8
BcaC05g26397 Brassica carinata HOM05D000888 ORTHO05D000740 4.5e-06 54.3 71 45.1
Thhalv10000279m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 4.5e-06 54.3 71 42.3
AT2G24700 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 5.9e-06 53.9 57 47.4
BcaB01g02995 Brassica carinata HOM05D000888 ORTHO05D000740 5.9e-06 53.9 56 50.0
BcaB03g12709 Brassica carinata HOM05D000888 ORTHO05D000740 7.7e-06 53.5 74 40.5
A01p06630 Brassica napus HOM05D000888 ORTHO05D021663 7.7e-06 53.5 73 39.7
BraA01t00621Z Brassica rapa HOM05D000888 ORTHO05D000740 7.7e-06 53.5 73 39.7


User provided reference genes

Program Settings