Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g22500 Schrenkiella parvula HOM05D007853 ORTHO05D009873 3.8e-246 854.4 421 100.0
Thhalv10002571m.g Eutrema salsugineum HOM05D007853 ORTHO05D009873 2.9e-206 721.8 381 92.4
BcaB06g26693 Brassica carinata HOM05D007853 ORTHO05D009873 2.8e-193 678.7 379 86.5
BcaC06g35750 Brassica carinata HOM05D007853 ORTHO05D009873 1.2e-180 636.7 378 82.3
BolC7t41605H Brassica oleracea HOM05D007853 ORTHO05D009873 1.2e-180 636.7 378 82.3
C07p11280 Brassica napus HOM05D007853 ORTHO05D009873 4.4e-178 628.2 375 82.1
A07p07510 Brassica napus HOM05D007853 ORTHO05D009873 1.4e-176 623.2 380 80.3
BraA07t28542Z Brassica rapa HOM05D007853 ORTHO05D009873 1.4e-176 623.2 380 80.3
Aa31LG8G11920 Aethionema arabicum HOM05D007853 ORTHO05D009873 1.0e-174 617.1 392 79.6
AL3G40490 Arabidopsis lyrata HOM05D007853 ORTHO05D009873 4.0e-171 605.1 386 79.3
CARHR101120 Cardamine hirsuta HOM05D007853 ORTHO05D009873 2.0e-170 602.8 389 77.6
Carub.0003s2515 Capsella rubella HOM05D007853 ORTHO05D009873 7.5e-170 600.9 389 78.4
AT3G24760 Arabidopsis thaliana HOM05D007853 ORTHO05D009873 2.7e-167 592.4 384 77.3
THA.LOC104804604 Tarenaya hassleriana HOM05D007853 ORTHO05D009873 1.0e-166 590.5 379 77.3
Thecc.01G228200 Theobroma cacao HOM05D007853 ORTHO05D009873 1.5e-133 480.3 379 62.5
Duzib133G0551 Durio zibethinus HOM05D007853 ORTHO05D009873 4.5e-130 468.8 379 61.5
Manes.12G041900 Manihot esculenta HOM05D007853 ORTHO05D009873 1.0e-129 467.6 376 63.8
Gohir.A11G136300 Gossypium hirsutum HOM05D007853 ORTHO05D009873 1.5e-125 453.8 377 59.9
Gohir.D11G142600 Gossypium hirsutum HOM05D007853 ORTHO05D009873 1.9e-125 453.4 376 59.6
Gorai.007G152900 Gossypium raimondii HOM05D007853 ORTHO05D009873 1.9e-125 453.4 376 59.6
CiPaw.04G106700 Carya illinoinensis HOM05D007853 ORTHO05D009873 3.7e-124 449.1 389 59.4
Prupe.8G204900 Prunus persica HOM05D007853 ORTHO05D009873 3.4e-122 442.6 372 62.6
FvH4_2g19330 Fragaria vesca HOM05D007853 ORTHO05D009873 3.8e-121 439.1 383 60.1
FAN24G3434 Fragaria x ananassa HOM05D007853 ORTHO05D009873 8.5e-121 438.0 381 60.4
RcHm_v2.0_Chr6g0285141 Rosa chinensis HOM05D007853 ORTHO05D009873 2.5e-120 436.4 377 60.5
Ciclev10020523m.g Citrus clementina HOM05D007853 ORTHO05D009873 7.2e-120 434.9 394 57.6
FAN15G1839 Fragaria x ananassa HOM05D007853 ORTHO05D009873 9.3e-120 434.5 381 59.6
FAN27G0897 Fragaria x ananassa HOM05D007853 ORTHO05D009873 3.6e-119 432.6 383 59.5
MD05G1178400 Malus domestica HOM05D007853 ORTHO05D009873 3.3e-117 426.0 382 58.9
CiPaw.03G151300 Carya illinoinensis HOM05D007853 ORTHO05D009873 7.4e-117 424.9 391 58.3
Cfa002555 Carpinus fangiana HOM05D007853 ORTHO05D009873 1.1e-115 421.0 378 57.9
PGR044G1509 Punica granatum HOM05D007853 ORTHO05D009873 4.5e-114 415.6 388 55.4
QL09p044713 Quercus lobata HOM05D007853 ORTHO05D009873 4.5e-114 415.6 375 57.9
vmacro14766 Vaccinium macrocarpon HOM05D007853 ORTHO05D009873 2.9e-113 412.9 396 55.6
Dinv04666 Davidia involucrata HOM05D007853 ORTHO05D009873 9.4e-112 407.9 396 53.5
TAR636G2687 Trochodendron aralioides HOM05D007853 ORTHO05D009873 4.7e-111 405.6 378 54.5
TWI18G0437 Tripterygium wilfordii HOM05D007853 ORTHO05D009873 6.1e-111 405.2 365 57.8
Hma1.2p1_1061F.1_g253350 Hydrangea macrophylla HOM05D007853 ORTHO05D009873 8.8e-110 401.4 383 56.7
Actinidia09494 Actinidia chinensis HOM05D007853 ORTHO05D009873 3.3e-109 399.4 397 53.1
ClCG09G009130 Citrullus lanatus HOM05D007853 ORTHO05D009873 1.1e-107 394.4 373 56.6
Lalb_Chr03g0041891 Lupinus albus HOM05D007853 ORTHO05D009873 1.1e-107 394.4 383 53.5
Lsat_1_v5_gn_5_179800 Lactuca sativa HOM05D007853 ORTHO05D009873 1.5e-106 390.6 396 50.5
MBI10_g16828_MAGBIO Magnolia biondii HOM05D007853 ORTHO05D009873 4.5e-106 389.0 379 53.6
HanXRQChr01g0014671 Helianthus annuus HOM05D007853 ORTHO05D009873 3.8e-105 386.0 397 50.4
Lj1C83T5 Lonicera japonica HOM05D007853 ORTHO05D009873 5.0e-105 385.6 379 52.8
CSS0040524 Camellia sinensis var. sinensis HOM05D007853 ORTHO05D009873 4.2e-104 382.5 379 53.0
Phvul.008G123400 Phaseolus vulgaris HOM05D007853 ORTHO05D009873 4.2e-104 382.5 374 53.2
VMungo1383G0232 Vigna mungo HOM05D007853 ORTHO05D009873 7.2e-104 381.7 374 53.5
Lj1g0009384 Lotus japonicus HOM05D007853 ORTHO05D009873 9.4e-104 381.3 429 49.2
Medtr0197s0070 Medicago truncatula HOM05D007853 ORTHO05D009873 2.3e-102 376.7 374 53.2
Medtr7g059040 Medicago truncatula HOM05D007853 ORTHO05D009873 2.3e-102 376.7 374 53.2
Glyma.18G173200 Glycine max HOM05D007853 ORTHO05D009873 3.0e-102 376.3 379 53.6
Psat3g143800 Pisum sativum HOM05D007853 ORTHO05D009873 1.1e-101 374.4 376 52.9
TPR.G15291 Trifolium pratense HOM05D007853 ORTHO05D009873 3.3e-101 372.9 372 53.8
Ca_07539_v3 Cicer arietinum L. HOM05D007853 ORTHO05D009873 1.3e-100 370.9 377 53.8
Glyma.08G356100 Glycine max HOM05D007853 ORTHO05D009873 4.8e-100 369.0 378 53.2
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.6e-98 363.2 374 49.7
CAN.G771.60 Capsicum annuum HOM05D007853 ORTHO05D009873 4.5e-98 362.5 408 48.0
Actinidia23732 Actinidia chinensis HOM05D007853 ORTHO05D009873 1.0e-97 361.3 365 54.0
Sopen06g034930 Solanum pennellii HOM05D007853 ORTHO05D009873 1.9e-96 357.1 385 49.9
Solyc06g083550.1 Solanum lycopersicum HOM05D007853 ORTHO05D009873 5.5e-96 355.5 385 50.1
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 2.7e-95 353.2 359 51.5
ATR0787G102 Amborella trichopoda HOM05D007853 ORTHO05D009873 4.7e-95 352.4 379 48.0
DCAR_000536 Daucus carota HOM05D007853 ORTHO05D009873 1.1e-91 341.3 368 49.7
Oeu015462.1 Olea europaea HOM05D007853 ORTHO05D009873 1.4e-91 340.9 369 49.3
SEGI_02257 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 1.2e-90 337.8 374 47.3
GSVIVG01028563001 Vitis vinifera HOM05D007853 ORTHO05D009873 2.2e-89 333.6 359 53.2
Haze_24777 Corylus avellana HOM05D007853 ORTHO05D009873 2.0e-77 293.9 221 64.3
Peaxi162Scf00517g00042 Petunia axillaris HOM05D007853 ORTHO05D009873 8.0e-71 271.9 243 53.1
Nn3g19919 Nelumbo nucifera HOM05D007853 ORTHO05D009873 2.5e-56 223.8 196 55.1
Nitab4.5_0006773g0030 Nicotiana tabacum HOM05D007853 ORTHO05D009873 3.4e-53 213.4 266 41.4
Mapoly0119s0024 Marchantia polymorpha HOM05D007853 ORTHO05D009873 3.0e-49 200.3 381 35.2
Atru.chr5.2009 Acer truncatum HOM05D007853 ORTHO05D009873 3.2e-43 180.3 135 63.7
Mapoly0119s0021 Marchantia polymorpha HOM05D007853 ORTHO05D009873 5.1e-41 172.9 383 29.0
Lalb_Chr00c01g0403781 Lupinus albus HOM05D007853 ORTHO05D009873 4.6e-26 123.2 117 53.0
Pp3c2_14180 Physcomitrium patens HOM05D007853 ORTHO05D009873 4.6e-26 123.2 391 26.1
Aqoxy3G02876 Aquilegia oxysepala HOM05D004907 ORTHO05D005707 5.6e-24 116.3 377 26.3
HanXRQChr06g0173591 Helianthus annuus HOM05D004907 ORTHO05D005707 5.6e-24 116.3 374 27.3
AUR62014077 Chenopodium quinoa HOM05D004907 ORTHO05D005707 9.6e-24 115.5 373 27.9
CiPaw.05G186900 Carya illinoinensis HOM05D004907 ORTHO05D005707 1.3e-23 115.2 366 27.3
Carub.0001s2297 Capsella rubella HOM05D004907 ORTHO05D005707 1.6e-23 114.8 395 29.9
Lsat_1_v5_gn_8_154601 Lactuca sativa HOM05D004907 ORTHO05D005707 3.7e-23 113.6 377 26.8
Nn4g22709 Nelumbo nucifera HOM05D004907 ORTHO05D005707 4.8e-23 113.2 382 27.7
AUR62005416 Chenopodium quinoa HOM05D004907 ORTHO05D005707 2.4e-22 110.9 370 28.1
Lsat_1_v5_gn_3_28580 Lactuca sativa HOM05D004907 ORTHO05D005707 4.0e-22 110.2 383 28.7
Pp3c10_6380 Physcomitrium patens HOM05D007853 ORTHO05D009873 4.0e-22 110.2 383 24.8
AT1G23390 Arabidopsis thaliana HOM05D004907 ORTHO05D005707 1.2e-21 108.6 399 28.3
Psat2g106360 Pisum sativum HOM05D004907 ORTHO05D005707 2.0e-21 107.8 363 30.3
Rhsim12G0113900 Rhododendron simsii HOM05D004907 ORTHO05D005707 2.0e-21 107.8 340 29.1
Thhalv10007835m.g Eutrema salsugineum HOM05D004907 ORTHO05D005707 3.4e-21 107.1 385 28.8
MSTRG.2405 Avicennia marina HOM05D004907 ORTHO05D005707 7.6e-21 105.9 365 28.5
TAR374G1110 Trochodendron aralioides HOM05D004907 ORTHO05D005707 7.6e-21 105.9 368 27.4
A09p41240 Brassica napus HOM05D004907 ORTHO05D005707 2.9e-20 104.0 377 27.9
BraA09t39619Z Brassica rapa HOM05D004907 ORTHO05D005707 2.9e-20 104.0 385 27.8
PSO782G1891 Papaver somniferum HOM05D004907 ORTHO05D005707 2.9e-20 104.0 363 25.9
Manes.13G027600 Manihot esculenta HOM05D004907 ORTHO05D005707 3.8e-20 103.6 370 27.8
CARHR023830 Cardamine hirsuta HOM05D004907 ORTHO05D005707 4.9e-20 103.2 383 27.7
Rhsim12G0042700 Rhododendron simsii HOM05D004907 ORTHO05D005707 6.4e-20 102.8 372 27.2
Gohir.D01G149900 Gossypium hirsutum HOM05D004907 ORTHO05D005707 8.4e-20 102.4 381 26.2
BolC5t30967H Brassica oleracea HOM05D004907 ORTHO05D005707 1.1e-19 102.1 405 26.9
Migut.L01466 Erythranthe guttata HOM05D004907 ORTHO05D005707 1.1e-19 102.1 360 28.1
Gohir.D02G160600 Gossypium hirsutum HOM05D004907 ORTHO05D005707 2.5e-19 100.9 338 29.0
SEGI_08843 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 2.5e-19 100.9 350 28.6
Gorai.002G186000 Gossypium raimondii HOM05D004907 ORTHO05D005707 4.2e-19 100.1 388 24.7
CSS0001528 Camellia sinensis var. sinensis HOM05D004907 ORTHO05D005707 7.1e-19 99.4 373 27.1
C05p22690 Brassica napus HOM05D004907 ORTHO05D005707 9.3e-19 99.0 405 26.7
BcaC05g26256 Brassica carinata HOM05D004907 ORTHO05D005707 1.2e-18 98.6 377 27.3
Psat5g210760 Pisum sativum HOM05D004907 ORTHO05D005707 1.6e-18 98.2 334 26.0
Gohir.A01G160100 Gossypium hirsutum HOM05D004907 ORTHO05D005707 2.7e-18 97.4 309 28.2
PGR119G0630 Punica granatum HOM05D004907 ORTHO05D005707 2.7e-18 97.4 364 24.7
Prupe.1G249900 Prunus persica HOM05D004907 ORTHO05D005707 4.6e-18 96.7 366 27.0
SalBow2G1155 Salvia bowleyana HOM05D004907 ORTHO05D005707 6.0e-18 96.3 358 27.9
Atru.chr11.2072 Acer truncatum HOM05D004907 ORTHO05D005707 7.9e-18 95.9 355 28.7
BcaB07g32334 Brassica carinata HOM05D004907 ORTHO05D005707 7.9e-18 95.9 380 27.4
Hma1.2p1_0160F.1_g071120 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 1.0e-17 95.5 374 25.9
Oeu055460.1 Olea europaea HOM05D004907 ORTHO05D005707 1.0e-17 95.5 363 25.9
Sopen05g001160 Solanum pennellii HOM05D004907 ORTHO05D005707 1.0e-17 95.5 366 24.9
Ciclev10031561m.g Citrus clementina HOM05D004907 ORTHO05D005707 1.3e-17 95.1 424 26.2
PGSC0003DMG400013488 Solanum tuberosum HOM05D004907 ORTHO05D005707 2.3e-17 94.4 362 24.6
Hma1.2p1_0223F.1_g094330 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 1.1e-16 92.0 384 25.5
Solyc05g005150.1 Solanum lycopersicum HOM05D004907 ORTHO05D005707 1.1e-16 92.0 363 25.1
THA.LOC104822976 Tarenaya hassleriana HOM05D004907 ORTHO05D005707 2.5e-16 90.9 371 26.4
Gohir.A03G137500 Gossypium hirsutum HOM05D004907 ORTHO05D005707 3.3e-16 90.5 374 24.9
QL03p059196 Quercus lobata HOM05D004907 ORTHO05D005707 3.3e-16 90.5 339 25.7
CAN.G728.4 Capsicum annuum HOM05D004907 ORTHO05D005707 7.4e-16 89.4 362 24.0
AL1G37180 Arabidopsis lyrata HOM05D004907 ORTHO05D005707 2.1e-15 87.8 383 26.1
MELO3C011980.2 Cucumis melo HOM05D004907 ORTHO05D005707 2.8e-15 87.4 347 28.0
Medtr5g043750 Medicago truncatula HOM05D004907 ORTHO05D005707 4.8e-15 86.7 356 23.6
Nitab4.5_0000338g0040 Nicotiana tabacum HOM05D004907 ORTHO05D005707 4.8e-15 86.7 284 28.9
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 4.8e-15 86.7 362 23.8
Mapoly0115s0063 Marchantia polymorpha HOM05D007853 ORTHO05D009873 1.1e-14 85.5 287 27.5
Nitab4.5_0015209g0010 Nicotiana tabacum HOM05D004907 ORTHO05D005707 3.1e-14 84.0 284 28.2
Rhsim01G0257600 Rhododendron simsii HOM05D007853 ORTHO05D009873 4.0e-14 83.6 106 49.1
Glyma.02G036400 Glycine max HOM05D004907 ORTHO05D005707 6.9e-14 82.8 335 25.7
Lj2g0022644 Lotus japonicus HOM05D004907 ORTHO05D005707 1.2e-13 82.0 345 26.4
CsaV3_5G031400 Cucumis sativus L. HOM05D004907 ORTHO05D005707 1.5e-13 81.6 342 26.0
Glyma.01G028800 Glycine max HOM05D004907 ORTHO05D005707 1.5e-13 81.6 338 26.3
Dinv40740 Davidia involucrata HOM05D003931 ORTHO05D004577 2.6e-13 80.9 59 54.2
Pp3c10_6350 Physcomitrium patens HOM05D007853 ORTHO05D009873 3.4e-13 80.5 245 26.9
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 3.4e-13 80.5 355 24.2
TWI36G0219 Tripterygium wilfordii HOM05D004907 ORTHO05D005707 1.0e-12 79.0 317 24.3
VMungo1215G1811 Vigna mungo HOM05D004907 ORTHO05D005707 1.7e-12 78.2 357 26.1
Mapoly0168s0028 Marchantia polymorpha HOM05D003005 ORTHO05D007546 2.2e-12 77.8 306 25.2
Pp3c26_380 Physcomitrium patens HOM05D002809 ORTHO05D007546 2.9e-12 77.4 304 25.3
Gorai.005G180700 Gossypium raimondii HOM05D004907 ORTHO05D005707 4.9e-12 76.6 338 25.7
AagrBONN_evm.TU.Sc2ySwM_117.2091 Anthoceros agrestis HOM05D003005 ORTHO05D004939 1.9e-11 74.7 379 22.2
Thhalv10016113m.g Eutrema salsugineum HOM05D007853 ORTHO05D009873 1.9e-11 74.7 65 72.3
AagrBONN_evm.TU.Sc2ySwM_228.2355 Anthoceros agrestis HOM05D002809 ORTHO05D007546 3.2e-11 73.9 316 25.6
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 9.3e-11 72.4 347 24.8
Mapoly0137s0025 Marchantia polymorpha HOM05D004302 ORTHO05D004939 1.2e-10 72.0 333 23.1
Sed0025966 Sechium edule HOM05D002061 ORTHO05D005707 7.9e-10 69.3 375 22.9
Sed0027759 Sechium edule HOM05D004907 ORTHO05D005707 5.1e-09 66.6 386 23.3
SEGI_02380 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 5.1e-09 66.6 42 69.0
Mapoly0098s0011 Marchantia polymorpha HOM05D007853 ORTHO05D009873 4.3e-08 63.5 318 26.4
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 2.2e-07 61.2 368 26.9
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.8e-07 60.8 351 25.9
Pp3c10_20160 Physcomitrium patens HOM05D003005 ORTHO05D004563 2.8e-07 60.8 323 21.7
AagrBONN_evm.TU.Sc2ySwM_344.2438 Anthoceros agrestis HOM05D002809 ORTHO05D004939 4.8e-07 60.1 365 22.2
Phvul.002G064500 Phaseolus vulgaris HOM05D004907 ORTHO05D005707 4.8e-07 60.1 229 27.1


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