Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 5.2e-131 471.1 243 100.0
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 3.1e-115 418.7 233 91.0
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 1.2e-114 416.8 232 89.7
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 1.2e-114 416.8 233 91.8
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 1.5e-114 416.4 233 90.6
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 6.4e-113 411.0 233 89.3
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 1.1e-112 410.2 232 88.8
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 2.4e-112 409.1 232 87.9
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 2.4e-112 409.1 232 87.5
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 2.4e-112 409.1 232 87.5
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 2.3e-110 402.5 225 90.2
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.4e-107 393.3 232 84.1
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 1.5e-66 256.9 227 57.7
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 3.4e-66 255.8 211 58.8
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 3.2e-64 249.2 224 54.9
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 3.6e-63 245.7 211 58.3
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.8e-62 243.4 211 57.3
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.3e-62 243.0 220 56.8
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 3.9e-62 242.3 219 55.3
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 5.1e-62 241.9 238 53.8
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 6.7e-62 241.5 212 57.5
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 6.7e-62 241.5 210 56.7
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 1.1e-61 240.7 213 55.9
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.5e-61 240.4 219 54.8
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 3.3e-61 239.2 230 51.3
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 7.4e-61 238.0 224 54.0
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 7.4e-61 238.0 214 54.7
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 9.7e-61 237.7 219 54.3
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 2.2e-60 236.5 217 53.5
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 2.2e-60 236.5 218 55.5
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 2.8e-60 236.1 225 52.4
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 8.2e-60 234.6 227 52.4
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 1.1e-59 234.2 203 57.6
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 1.4e-59 233.8 218 50.9
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 2.4e-59 233.0 218 54.1
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 2.4e-59 233.0 218 54.1
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 3.1e-59 232.6 219 54.3
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 3.1e-59 232.6 218 54.1
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 4.1e-59 232.3 212 54.2
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 1.5e-58 230.3 223 54.7
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 3.4e-58 229.2 213 55.9
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 5.9e-58 228.4 226 54.0
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 5.9e-58 228.4 217 53.0
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 1.3e-57 227.3 212 52.8
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 1.3e-57 227.3 230 50.4
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 1.7e-57 226.9 212 52.4
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 6.5e-57 224.9 202 52.5
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 1.4e-56 223.8 214 53.3
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 1.9e-56 223.4 221 50.7
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 3.2e-56 222.6 216 51.9
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 5.5e-56 221.9 247 48.6
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 9.4e-56 221.1 203 52.7
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 2.1e-55 219.9 213 52.1
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 7.9e-55 218.0 214 49.5
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 1.0e-54 217.6 218 50.9
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 1.4e-54 217.2 226 50.4
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 1.8e-54 216.9 215 51.2
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 3.0e-54 216.1 210 50.0
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 8.8e-54 214.5 221 48.9
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.5e-53 213.8 203 51.7
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 9.7e-53 211.1 223 49.8
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 9.7e-53 211.1 236 46.2
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 1.3e-52 210.7 211 49.8
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 1.7e-52 210.3 213 51.2
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.7e-52 210.3 208 50.0
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 2.8e-52 209.5 201 51.7
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 6.3e-52 208.4 210 50.5
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 1.4e-51 207.2 205 52.7
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 3.1e-51 206.1 210 48.1
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 4.1e-51 205.7 237 44.7
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 1.2e-50 204.1 210 48.1
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 2.0e-50 203.4 210 50.0
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 2.6e-50 203.0 210 48.1
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 6.5e-49 198.4 235 48.1
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 7.2e-48 194.9 210 48.1
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 1.6e-47 193.7 212 47.6
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 5.7e-45 185.3 222 43.2
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 9.7e-45 184.5 227 42.7
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 9.7e-45 184.5 222 43.2
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 6.3e-44 181.8 221 43.9
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 5.3e-43 178.7 246 42.7
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 7.0e-43 178.3 168 52.4
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 1.6e-42 177.2 218 45.9
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 2.9e-41 172.9 214 43.9
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 6.5e-41 171.8 211 42.2
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 3.2e-40 169.5 228 41.7
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 1.6e-39 167.2 222 41.0
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 1.6e-39 167.2 214 41.1
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 2.1e-39 166.8 305 34.8
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 8.3e-36 154.8 188 43.1
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 1.1e-35 154.5 172 48.3
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.0e-34 150.2 147 55.1
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 6.5e-33 145.2 141 51.8
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 8.5e-33 144.8 142 50.7
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 1.5e-32 144.1 172 42.4
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 3.0e-30 136.3 144 51.4
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 4.4e-29 132.5 210 36.2
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 7.5e-29 131.7 210 38.1
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 8.3e-28 128.3 171 42.7
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 3.5e-26 122.9 155 45.2
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 3.0e-22 109.8 155 41.3
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 3.4e-21 106.3 135 42.2
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 2.8e-20 103.2 91 51.6
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 8.3e-20 101.7 203 34.5
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 3.9e-09 66.2 54 51.9
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 1.5e-08 64.3 83 53.0
Hund22393 Selenicereus undatus HOM05D007345 ORTHO05D009277 2.8e-07 60.1 50 58.0
ECA246G2944 Erigeron canadensis HOM05D005920 ORTHO05D007211 1.4e-06 57.8 108 33.3


User provided reference genes

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