Gene: Nitab4.5_0004612g0070
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0004612g0070
- Transcript Identifier Nitab4.5_0004612g0070.1
- Gene Type Coding gene
- Location Nitab4.5_0004612 : 55588-69629 : negative
Gene Family Information
- ID HOM05D000066
- #Genes/#Species 3967/96
- Phylogenetic origin
- ID ORTHO05D000003
- #Genes/#Species 15137/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0004612g0070.1
- SR1-identifier Nta05g19320.1
Descriptions
- Description Tetratricopeptide TPR2, Pentatricopeptide repeat, Tetratricopeptide-like helical, Concanavalin A-like lectin/glucanase, subgroup, Concanavalin A-like lectin/glucanases superfamily, Glycoside hydrolase, family 16, active site, Glycoside hydrolase, family 16, Tetratricopeptide repeat, Thioredoxin-like fold
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010411 | IEA | InterPro | xyloglucan metabolic process | |
| GO:0042546 | IEA | InterPro | cell wall biogenesis | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0006073 | ISO | PLAZA Homology (enrichment) | cellular glucan metabolic process | HOM05D000066 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016762 | IEA | InterPro | xyloglucan:xyloglucosyl transferase activity | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | ISO | PLAZA Homology (enrichment) | apoplast | HOM05D000066 |
| GO:0005618 | ISO | PLAZA Homology (enrichment) | cell wall | HOM05D000066 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002885 | Pentatricopeptide repeat |
| IPR036249 | Thioredoxin-like superfamily |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR019734 | Tetratricopeptide repeat |
| IPR016455 | Xyloglucan endotransglucosylase/hydrolase |
| IPR000757 | Glycoside hydrolase family 16 |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| IPR032867 | DYW domain |
| Mapman id | Description |
|---|---|
| 50.2.4 | Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase |