Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 4.2e-133 478.0 241 100.0
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 5.0e-126 454.5 241 94.2
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 8.5e-126 453.8 241 92.9
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.1e-125 453.4 241 94.2
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.1e-125 453.4 241 93.8
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 4.2e-125 451.4 241 93.8
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 4.2e-125 451.4 241 93.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 5.5e-125 451.1 241 92.9
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 1.2e-124 449.9 241 93.4
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.0e-123 446.8 241 92.5
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 2.0e-122 442.6 241 92.9
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 5.7e-122 441.0 241 92.5
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 1.7e-121 439.5 241 90.5
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 4.3e-109 398.3 241 80.1
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 7.3e-109 397.5 241 80.1
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.2e-108 396.7 241 80.1
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.2e-108 396.7 241 80.1
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 2.8e-108 395.6 241 78.8
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 3.6e-108 395.2 241 80.5
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 8.0e-108 394.0 241 79.7
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 8.0e-108 394.0 240 78.3
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.0e-107 393.7 240 79.2
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 1.4e-107 393.3 241 79.7
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 1.8e-107 392.9 241 79.3
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.3e-107 392.5 241 77.6
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.3e-107 392.5 241 77.6
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 4.0e-107 391.7 241 76.3
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 5.2e-107 391.3 241 77.2
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 8.9e-107 390.6 241 78.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-106 390.2 241 77.2
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 79.7
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 78.4
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 7.5e-106 387.5 253 76.3
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 9.8e-106 387.1 215 88.8
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.7e-105 386.3 241 76.8
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 3.7e-105 385.2 230 79.6
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 8.3e-105 384.0 237 77.2
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 8.3e-105 384.0 236 76.7
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.4e-104 383.3 247 76.5
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.4e-104 383.3 232 79.7
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.2e-104 382.1 238 77.3
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.1e-104 381.7 237 76.8
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 4.1e-104 381.7 241 75.9
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.6e-103 379.8 241 78.0
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 2.7e-103 379.0 232 76.7
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 3.5e-103 378.6 238 76.9
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 3.5e-103 378.6 241 75.5
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.9e-103 377.9 237 75.1
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.0e-102 377.1 241 74.3
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 1.0e-102 377.1 238 76.5
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.0e-102 377.1 238 76.9
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 1.7e-102 376.3 232 76.7
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 2.3e-102 375.9 232 75.9
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 3.0e-102 375.6 221 81.4
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 3.9e-102 375.2 232 75.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.5e-101 373.2 232 76.7
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 2.5e-101 372.5 241 75.1
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 7.3e-101 370.9 243 75.3
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.6e-100 369.8 226 76.5
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 6.2e-100 367.9 223 78.9
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.3e-99 365.9 241 71.4
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 3.1e-99 365.5 231 76.2
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.0e-99 365.2 260 68.8
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 5.2e-99 364.8 241 71.8
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 2.0e-98 362.8 241 71.0
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 2.6e-98 362.5 241 71.4
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 7.5e-98 360.9 231 74.9
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 9.8e-98 360.5 224 79.0
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.7e-97 358.6 264 67.4
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 6.4e-97 357.8 226 77.0
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 6.4e-97 357.8 236 73.7
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 6.4e-97 357.8 252 69.8
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.4e-96 356.7 262 67.9
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 3.2e-96 355.5 229 72.1
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 9.2e-96 354.0 229 74.2
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 2.0e-95 352.8 239 69.0
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.5e-95 352.1 209 80.4
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 3.5e-95 352.1 229 73.4
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 4.6e-95 351.7 241 72.6
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.3e-94 350.1 241 71.0
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.5e-93 346.7 233 73.8
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 3.3e-93 345.5 233 73.4
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.3e-93 344.4 234 71.8
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 7.3e-93 344.4 240 67.1
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 9.5e-93 344.0 233 73.0
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 9.5e-93 344.0 282 64.9
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 5.8e-90 334.7 238 69.3
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.2e-89 332.8 255 67.1
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 7.1e-88 327.8 264 64.4
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.6e-87 325.1 232 69.0
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 2.9e-81 305.8 196 75.0
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.4e-80 302.8 196 76.0
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 4.6e-79 298.5 226 63.7
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 5.1e-78 295.0 226 62.8
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 2.1e-76 289.7 211 66.8
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 8.1e-76 287.7 236 63.1
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 8.1e-76 287.7 266 58.3
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.1e-75 287.3 229 63.3
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 7.6e-74 281.2 177 76.3
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 7.1e-72 274.6 306 48.7
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 6.0e-71 271.6 240 55.8
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.8e-67 260.0 194 68.6
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 8.4e-65 251.1 200 64.0
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.4e-64 249.6 160 71.2
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 1.3e-62 243.8 184 65.8
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 1.3e-62 243.8 184 65.8
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.7e-62 243.4 220 52.3
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 6.6e-62 241.5 156 74.4
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.9e-61 240.0 225 53.3
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.2e-57 226.5 194 62.9
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.1e-53 214.2 221 48.9
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 3.3e-45 186.0 123 74.8
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 4.1e-43 179.1 128 68.8
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 2.5e-37 159.8 164 53.0
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 5.0e-33 145.6 122 61.5
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.0e-30 137.9 92 70.7
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.3e-27 125.6 93 68.8
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 2.9e-25 119.8 69 81.2
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 8.5e-25 118.2 71 73.2
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 8.5e-25 118.2 86 65.1
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 1.8e-22 110.5 55 87.3
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 1.4e-19 100.9 115 53.0
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 7.2e-16 88.6 152 34.9
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 8.8e-14 81.6 69 63.8
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 5.9e-10 68.9 70 52.9


User provided reference genes

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