Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 4.4e-252 874.4 523 100.0
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 1.6e-214 749.6 534 86.1
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 2.4e-213 745.7 526 87.6
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 2.6e-212 742.3 527 86.5
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 1.9e-210 736.1 526 87.3
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 4.6e-209 731.5 526 84.2
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 1.9e-207 726.1 534 85.2
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 1.1e-205 720.3 531 84.6
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 6.9e-205 717.6 528 83.0
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 1.9e-202 709.5 531 83.6
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 1.9e-199 699.5 528 82.0
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 3.1e-197 692.2 523 83.9
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 9.9e-196 687.2 525 80.6
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 7.9e-193 677.6 526 80.2
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 3.9e-192 675.2 536 76.1
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 9.3e-178 627.5 455 84.4
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 7.9e-177 624.4 544 71.9
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 4.1e-141 505.8 521 65.6
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 3.8e-139 499.2 563 59.0
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 6.5e-139 498.4 546 61.4
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 8.6e-139 498.0 534 59.2
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 3.3e-138 496.1 528 60.4
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 1.2e-137 494.2 562 58.4
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 2.1e-137 493.4 552 60.3
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 2.3e-136 490.0 533 60.8
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 6.8e-136 488.4 550 57.5
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 6.8e-136 488.4 523 60.4
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 9.8e-135 484.6 538 59.5
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 1.7e-134 483.8 548 58.0
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 2.2e-134 483.4 541 61.6
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 2.8e-134 483.0 543 62.2
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 2.4e-133 479.9 542 60.7
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 1.6e-132 477.2 572 58.7
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 2.0e-132 476.9 544 59.0
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 2.7e-132 476.5 525 62.3
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 1.0e-131 474.6 562 58.2
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 1.7e-131 473.8 523 53.9
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 5.0e-131 472.2 539 61.2
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 8.6e-131 471.5 538 57.2
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 4.3e-130 469.2 528 61.2
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.6e-129 467.2 520 58.7
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 2.8e-129 466.5 547 58.7
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 3.6e-129 466.1 563 58.3
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 3.0e-128 463.0 526 60.5
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 6.8e-128 461.8 537 62.2
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 3.4e-127 459.5 534 59.4
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 9.8e-127 458.0 546 59.3
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 9.8e-127 458.0 565 54.7
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 1.3e-126 457.6 552 58.2
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 3.7e-126 456.1 541 58.2
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 2.4e-125 453.4 533 58.0
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 2.4e-125 453.4 524 51.0
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 3.2e-125 453.0 539 56.8
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 4.1e-125 452.6 553 55.2
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 4.1e-125 452.6 556 57.2
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 5.4e-125 452.2 546 55.7
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 7.0e-125 451.8 533 58.2
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 2.7e-124 449.9 548 58.8
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 6.0e-124 448.7 580 52.9
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 6.6e-123 445.3 537 57.4
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 1.5e-122 444.1 551 57.7
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 1.5e-122 444.1 534 57.9
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 1.6e-121 440.7 526 57.6
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 1.6e-121 440.7 574 53.5
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 2.8e-121 439.9 555 54.4
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 4.7e-121 439.1 537 58.1
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 6.2e-121 438.7 541 59.0
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 6.2e-121 438.7 529 51.2
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 5.2e-120 435.6 547 57.6
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 9.8e-119 431.4 517 57.3
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 1.7e-118 430.6 550 54.7
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 1.7e-118 430.6 542 57.0
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 2.2e-118 430.3 523 56.2
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 6.4e-118 428.7 553 54.4
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 1.9e-117 427.2 569 52.9
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 5.4e-117 425.6 537 57.2
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 9.2e-117 424.9 545 56.9
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 1.2e-116 424.5 549 54.5
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 7.8e-116 421.8 608 51.8
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 7.8e-116 421.8 534 57.9
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 7.8e-116 421.8 548 53.1
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 3.9e-115 419.5 582 53.1
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-114 416.8 517 57.1
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.3e-114 416.4 513 56.7
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 2.1e-113 413.7 534 52.8
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 4.7e-113 412.5 520 58.5
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 6.2e-113 412.1 611 53.7
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.1e-112 411.4 517 59.0
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 3.1e-112 409.8 513 55.6
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 8.9e-112 408.3 543 48.6
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 1.5e-111 407.5 554 54.5
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 5.8e-111 405.6 516 58.7
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 7.5e-111 405.2 554 52.7
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 2.9e-110 403.3 556 51.1
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 2.9e-110 403.3 507 49.5
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 3.7e-110 402.9 536 49.6
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 1.1e-109 401.4 490 49.2
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 4.6e-108 396.0 528 47.3
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 1.7e-107 394.0 512 46.9
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 1.5e-106 391.0 578 50.9
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 9.5e-106 388.3 519 47.0
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 4.4e-103 379.4 534 51.3
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 1.6e-100 370.9 570 49.5
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 1.3e-99 367.9 499 55.5
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 9.6e-98 361.7 539 50.8
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 1.6e-97 360.9 518 49.4
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 2.4e-96 357.1 532 50.6
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 2.2e-86 323.9 593 46.9
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 3.5e-84 316.6 504 42.9
Nitab4.5_0008678g0020 Nicotiana tabacum HOM05D004813 ORTHO05D005889 2.3e-83 313.9 357 56.0
MD01G1006000 Malus domestica HOM05D004813 ORTHO05D005889 1.9e-82 310.8 342 58.5
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 2.6e-79 300.4 526 45.8
BolC7t43059H Brassica oleracea HOM05D004813 ORTHO05D005889 5.8e-79 299.3 283 67.5
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 5.5e-77 292.7 468 45.9
SMO275G0031 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 3.5e-76 290.0 470 43.2
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 1.5e-74 284.6 495 38.2
AagrBONN_evm.TU.Sc2ySwM_369.357 Anthoceros agrestis HOM05D004813 ORTHO05D005889 2.2e-70 270.8 543 35.5
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 4.9e-70 269.6 358 55.6
C07p25370 Brassica napus HOM05D004813 ORTHO05D005889 1.4e-69 268.1 276 64.5
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 2.7e-68 263.8 525 41.3
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 2.4e-56 224.2 358 51.4
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 2.0e-55 221.1 339 47.2
arahy.Tifrunner.gnm1.ann1.J34B41 Arachis hypogaea HOM05D004813 ORTHO05D005889 3.4e-55 220.3 198 61.6
PGR044G0267 Punica granatum HOM05D004813 ORTHO05D005889 8.5e-54 215.7 214 58.9
CBR_g26354 Chara braunii HOM05D004813 ORTHO05D005889 9.4e-53 212.2 241 51.5
CAN.G1166.5 Capsicum annuum HOM05D004813 ORTHO05D005889 8.8e-51 205.7 166 65.7
BcaC06g34713 Brassica carinata HOM05D004813 ORTHO05D005889 2.0e-50 204.5 191 63.4
BcaNung06644 Brassica carinata HOM05D004813 ORTHO05D005889 2.0e-50 204.5 191 63.4
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 1.1e-48 198.7 176 84.7
Cre08.g370601 Chlamydomonas reinhardtii HOM05D004813 ORTHO05D005889 7.7e-47 192.6 245 44.9
Actinidia19106 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.0e-42 177.9 117 76.9
PRCOL_00002680 Prasinoderma coloniale HOM05D004813 ORTHO05D005889 3.0e-35 154.1 253 38.7
SEGI_16864 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 8.8e-27 125.9 100 63.0
MBI07_g10351_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 1.8e-24 118.2 142 51.4
MCO01G452 Micromonas commoda HOM05D004813 ORTHO05D005889 3.6e-20 104.0 201 36.3
Haze_20617 Corylus avellana HOM05D004813 ORTHO05D005889 1.2e-18 99.0 154 43.5
MBI14_g23619_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 9.8e-18 95.9 62 75.8
BcaC04g21797 Brassica carinata HOM05D004813 ORTHO05D005889 4.9e-17 93.6 102 57.8
Lj3g0016907 Lotus japonicus HOM05D004813 ORTHO05D005889 1.6e-15 88.6 63 71.4
MBI05_g41028_MAGBIO Magnolia biondii HOM05D000669 ORTHO05D005889 8.6e-14 82.8 48 85.4
BcaC06g34714 Brassica carinata HOM05D000589 ORTHO05D001885 1.5e-13 82.0 46 89.1
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 2.1e-12 78.2 85 54.1
Lj6g0012951 Lotus japonicus HOM05D004813 ORTHO05D005889 6.1e-12 76.6 69 60.9
SEGI_40991 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 4.0e-11 73.9 79 51.9
HanXRQChr11g0336351 Helianthus annuus HOM05D004813 ORTHO05D005889 6.8e-11 73.2 77 49.4
SalBow1G5081 Salvia bowleyana HOM05D004813 ORTHO05D018488 4.9e-09 67.0 74 51.4
MBI03_g03787_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.1e-08 63.9 37 78.4
MBI14_g41770_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 6.0e-07 60.1 69 53.6
arahy.Tifrunner.gnm1.ann1.YI6NTU Arachis hypogaea HOM05D004813 ORTHO05D005889 3.9e-06 57.4 67 46.3


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