Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 4.1e-87 324.7 164 100.0
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 3.3e-81 305.1 166 94.0
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 9.7e-81 303.5 166 93.4
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 9.7e-81 303.5 166 93.4
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 9.1e-79 297.0 176 88.6
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 3.4e-78 295.0 153 95.4
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 3.4e-78 295.0 162 93.2
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 9.7e-73 276.9 162 86.4
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 1.3e-72 276.6 167 85.0
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 1.3e-72 276.6 161 85.7
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 1.7e-72 276.2 164 86.0
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 2.3e-66 255.8 164 76.8
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 1.8e-55 219.5 149 70.5
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.6e-54 216.5 168 67.9
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 1.0e-53 213.8 166 68.1
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 1.7e-53 213.0 165 68.5
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 1.5e-52 209.9 141 70.9
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 5.5e-52 208.0 147 68.7
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 7.2e-52 207.6 135 74.1
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 2.1e-51 206.1 148 69.6
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 4.7e-51 204.9 142 68.3
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 4.7e-51 204.9 163 63.8
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 6.1e-51 204.5 164 62.8
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 8.0e-51 204.1 179 59.2
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 4.0e-50 201.8 153 63.4
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 5.2e-50 201.4 128 75.8
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 8.9e-50 200.7 162 63.0
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.5e-49 199.9 172 61.6
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 2.6e-49 199.1 128 72.7
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 3.4e-49 198.7 125 80.0
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 4.4e-49 198.4 145 69.7
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 9.8e-49 197.2 122 77.9
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 1.3e-48 196.8 107 88.8
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 3.7e-48 195.3 148 68.2
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 6.3e-48 194.5 123 74.8
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 1.1e-47 193.7 161 59.6
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.4e-47 193.4 123 74.0
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 3.1e-47 192.2 164 61.6
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 4.1e-47 191.8 158 60.1
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 5.4e-47 191.4 165 58.2
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 7.0e-47 191.0 116 78.4
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 2.0e-46 189.5 155 60.6
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 2.0e-46 189.5 140 67.1
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 3.5e-46 188.7 161 60.2
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 7.8e-46 187.6 128 68.0
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 1.7e-45 186.4 161 59.0
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 2.3e-45 186.0 162 59.3
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 2.9e-45 185.7 145 66.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 6.6e-45 184.5 127 70.9
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 6.6e-45 184.5 164 64.0
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 1.1e-44 183.7 125 69.6
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 3.3e-44 182.2 126 71.4
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 4.3e-44 181.8 143 60.8
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 5.6e-44 181.4 160 57.5
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 5.6e-44 181.4 161 56.5
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 2.1e-43 179.5 139 64.0
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 6.1e-43 177.9 117 74.4
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 8.0e-43 177.6 123 68.3
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 1.4e-42 176.8 165 57.6
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.8e-42 176.4 118 72.0
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 3.0e-42 175.6 141 63.1
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 6.8e-42 174.5 115 73.0
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 8.9e-42 174.1 167 57.5
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 2.0e-41 172.9 165 56.4
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 3.4e-41 172.2 169 56.8
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 9.8e-41 170.6 169 56.8
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 9.8e-41 170.6 112 74.1
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 4.9e-40 168.3 158 57.0
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 8.3e-40 167.5 107 74.8
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.1e-39 167.2 159 52.8
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 1.1e-39 167.2 160 55.0
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 1.4e-39 166.8 107 76.6
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 7.0e-39 164.5 122 63.9
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 9.2e-39 164.1 151 57.0
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 3.5e-38 162.2 111 70.3
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 4.6e-38 161.8 100 80.0
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.0e-37 160.6 102 73.5
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.0e-37 160.6 102 73.5
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.7e-37 159.8 178 48.3
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 3.0e-37 159.1 108 70.4
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 8.6e-37 157.5 104 75.0
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.9e-36 156.4 125 60.8
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 3.3e-36 155.6 122 61.5
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 5.6e-36 154.8 146 56.2
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 2.8e-35 152.5 110 67.3
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 4.7e-35 151.8 115 65.2
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.4e-34 150.2 112 66.1
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 4.0e-34 148.7 109 66.1
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 5.2e-34 148.3 109 66.1
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 4.4e-33 145.2 142 56.3
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 9.8e-33 144.1 107 64.5
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 3.7e-32 142.1 96 72.9
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 1.2e-30 137.1 111 64.0
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 6.0e-30 134.8 163 44.8
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.2e-27 127.1 98 66.3
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 5.2e-26 121.7 85 64.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 2.9e-24 115.9 93 58.1
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 1.5e-17 93.6 79 59.5
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 2.5e-12 76.3 42 81.0
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 2.5e-12 76.3 42 81.0
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 1.4e-10 70.5 72 56.9
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 2.0e-09 66.6 69 50.7
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 3.2e-07 59.3 141 31.2
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.2e-06 57.4 104 31.7


User provided reference genes

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