Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g22750 Schrenkiella parvula HOM05D006277 ORTHO05D007673 2.9e-203 711.8 409 100.0
BcaNung02006 Brassica carinata HOM05D006277 ORTHO05D007673 1.9e-165 586.3 410 84.1
C07p43080 Brassica napus HOM05D006277 ORTHO05D007673 1.9e-165 586.3 422 82.2
Thhalv10004336m.g Eutrema salsugineum HOM05D006277 ORTHO05D007673 7.1e-165 584.3 409 82.4
BolC7t44835H Brassica oleracea HOM05D006277 ORTHO05D007673 1.2e-164 583.6 422 82.0
Carub.0006s2249 Capsella rubella HOM05D006277 ORTHO05D007673 6.2e-153 544.7 410 77.8
BcaNung01248 Brassica carinata HOM05D006277 ORTHO05D007673 7.1e-149 531.2 411 80.0
A06p35430 Brassica napus HOM05D006277 ORTHO05D007673 7.9e-148 527.7 423 75.4
BraA06t26466Z Brassica rapa HOM05D006277 ORTHO05D007673 2.1e-145 519.6 433 73.7
AL6G36240 Arabidopsis lyrata HOM05D006277 ORTHO05D007673 3.0e-139 499.2 459 67.1
AT5G24630 Arabidopsis thaliana HOM05D006277 ORTHO05D007673 4.2e-133 478.8 456 66.9
CARHR188820 Cardamine hirsuta HOM05D006277 ORTHO05D007673 1.2e-132 477.2 412 72.3
Aa31LG11G3890 Aethionema arabicum HOM05D006277 ORTHO05D007673 6.5e-126 454.9 436 67.4
C09p07160 Brassica napus HOM05D000010 ORTHO05D000063 1.2e-95 354.4 386 60.9
THA.LOC104803317 Tarenaya hassleriana HOM05D006277 ORTHO05D007673 3.5e-95 352.8 414 58.5
Gohir.A08G106400 Gossypium hirsutum HOM05D006277 ORTHO05D007673 2.7e-71 273.5 417 47.7
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 3.9e-70 269.6 268 63.8
Thecc.03G212000 Theobroma cacao HOM05D006277 ORTHO05D007673 5.1e-70 269.2 414 47.3
Gorai.004G126300 Gossypium raimondii HOM05D006277 ORTHO05D007673 8.6e-70 268.5 417 47.5
vmacro06474 Vaccinium macrocarpon HOM05D006277 ORTHO05D007673 8.3e-65 251.9 457 43.5
Dinv29192 Davidia involucrata HOM05D006277 ORTHO05D007673 1.1e-64 251.5 429 45.7
Potri.012G004700 Populus trichocarpa HOM05D006277 ORTHO05D007673 2.1e-63 247.3 420 46.2
COL.COLO4_14399 Corchorus olitorius HOM05D006277 ORTHO05D007673 4.6e-63 246.1 423 46.1
GSVIVG01038680001 Vitis vinifera HOM05D006277 ORTHO05D007673 6.6e-62 242.3 433 43.9
Atru.chr12.2501 Acer truncatum HOM05D006277 ORTHO05D007673 8.6e-62 241.9 424 46.0
Rhsim03G0218400 Rhododendron simsii HOM05D006277 ORTHO05D007673 1.1e-61 241.5 437 44.6
FAN01G0327 Fragaria x ananassa HOM05D006277 ORTHO05D007673 2.8e-60 236.9 423 48.5
Lj1g0014471 Lotus japonicus HOM05D006277 ORTHO05D007673 8.1e-60 235.3 428 44.6
Medtr3g093330 Medicago truncatula HOM05D006277 ORTHO05D007673 1.1e-59 235.0 427 44.0
FvH4_7g33320 Fragaria vesca HOM05D006277 ORTHO05D007673 1.8e-59 234.2 425 47.3
Duzib205G1288 Durio zibethinus HOM05D006277 ORTHO05D007673 4.0e-59 233.0 414 44.9
Sabra12G0006800 Salix brachista HOM05D006277 ORTHO05D007673 4.0e-59 233.0 435 44.8
QL09p006002 Quercus lobata HOM05D006277 ORTHO05D007673 5.2e-59 232.6 451 44.1
A09p06430 Brassica napus HOM05D000010 ORTHO05D000063 6.8e-59 232.3 199 70.9
Glyma.06G139100 Glycine max HOM05D006277 ORTHO05D007673 8.9e-59 231.9 438 45.2
Sabra12G0000500 Salix brachista HOM05D006277 ORTHO05D007673 1.5e-58 231.1 435 44.1
RcHm_v2.0_Chr1g0383301 Rosa chinensis HOM05D006277 ORTHO05D007673 4.4e-58 229.6 437 43.9
MSTRG.26953 Avicennia marina HOM05D006277 ORTHO05D007673 7.6e-58 228.8 430 43.7
FAN10G3443 Fragaria x ananassa HOM05D006277 ORTHO05D007673 2.9e-57 226.9 425 46.6
BraA09t36286Z Brassica rapa HOM05D000010 ORTHO05D000063 8.4e-57 225.3 227 60.4
Phvul.009G040200 Phaseolus vulgaris HOM05D006277 ORTHO05D007673 8.4e-57 225.3 405 44.2
VMungo1309G1324 Vigna mungo HOM05D006277 ORTHO05D007673 1.4e-56 224.6 428 44.9
Sc19g0000370 Simmondsia chinensis HOM05D006277 ORTHO05D007673 1.9e-56 224.2 426 42.7
FAN10G1913 Fragaria x ananassa HOM05D006277 ORTHO05D007673 4.2e-56 223.0 425 46.4
CSS0047728 Camellia sinensis var. sinensis HOM05D006277 ORTHO05D007673 7.1e-56 222.2 426 43.9
Atru.chr12.2525 Acer truncatum HOM05D006277 ORTHO05D007673 9.3e-56 221.9 417 44.8
SalBow4G0692 Salvia bowleyana HOM05D006277 ORTHO05D007673 2.7e-55 220.3 437 41.6
EL10Ac3g05132 Beta vulgaris HOM05D006277 ORTHO05D007673 3.5e-55 219.9 417 42.7
Hund09753 Selenicereus undatus HOM05D006277 ORTHO05D007673 3.5e-55 219.9 388 42.0
arahy.Tifrunner.gnm1.ann1.YJ5L14 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.0e-54 218.4 437 43.5
arahy.Tifrunner.gnm1.ann1.NYS2P6 Arachis hypogaea HOM05D006277 ORTHO05D007673 1.7e-54 217.6 437 43.2
CiPaw.06G038300 Carya illinoinensis HOM05D006277 ORTHO05D007673 5.1e-54 216.1 376 44.4
arahy.Tifrunner.gnm1.ann1.VE49IY Arachis hypogaea HOM05D006277 ORTHO05D007673 6.6e-54 215.7 439 43.5
MD01G1231400 Malus domestica HOM05D006277 ORTHO05D007673 1.1e-53 214.9 414 42.8
Lalb_Chr23g0272041 Lupinus albus HOM05D006277 ORTHO05D007673 4.3e-53 213.0 433 42.0
Psat6g243000 Pisum sativum HOM05D006277 ORTHO05D007673 4.3e-53 213.0 427 41.5
Cpa.g.sc3.186 Carica papaya HOM05D006277 ORTHO05D007673 5.6e-53 212.6 424 43.2
Ca_16838_v3 Cicer arietinum L. HOM05D006277 ORTHO05D007673 5.6e-53 212.6 445 43.6
SGA_v2.0_scaffold18G08496 Striga asiatica HOM05D006277 ORTHO05D007673 5.6e-53 212.6 423 40.0
TPR.G35912 Trifolium pratense HOM05D006277 ORTHO05D007673 7.3e-53 212.2 439 42.6
CANSAT21G1902 Cannabis sativa HOM05D006277 ORTHO05D007673 1.3e-52 211.5 421 42.0
Manes.18G108300 Manihot esculenta HOM05D006277 ORTHO05D007673 1.6e-52 211.1 431 41.8
Migut.F00123 Erythranthe guttata HOM05D006277 ORTHO05D007673 3.6e-52 209.9 429 40.3
FAN03G1266 Fragaria x ananassa HOM05D006277 ORTHO05D007673 4.8e-52 209.5 342 48.5
MD07G1303400 Malus domestica HOM05D006277 ORTHO05D007673 1.5e-50 204.5 423 42.6
TAR626G1328 Trochodendron aralioides HOM05D006277 ORTHO05D007673 2.6e-50 203.8 412 40.5
Glyma.04G225700 Glycine max HOM05D006277 ORTHO05D007673 3.4e-50 203.4 415 42.7
PGR142G2769 Punica granatum HOM05D006277 ORTHO05D007673 3.4e-50 203.4 435 40.9
Haze_00334 Corylus avellana HOM05D006277 ORTHO05D007673 2.9e-49 200.3 512 37.3
AUR62005949 Chenopodium quinoa HOM05D006277 ORTHO05D007673 3.8e-49 199.9 417 41.5
Ciclev10005393m.g Citrus clementina HOM05D006277 ORTHO05D007673 1.9e-48 197.6 292 47.6
Lsat_1_v5_gn_2_135460 Lactuca sativa HOM05D006277 ORTHO05D007673 4.2e-48 196.4 356 45.5
CAN.G303.58 Capsicum annuum HOM05D006277 ORTHO05D007673 1.6e-47 194.5 417 40.8
PGSC0003DMG400000548 Solanum tuberosum HOM05D006277 ORTHO05D007673 1.6e-47 194.5 418 42.1
TWI59G0797 Tripterygium wilfordii HOM05D006277 ORTHO05D007673 4.6e-47 193.0 294 46.3
Sopen03g027470 Solanum pennellii HOM05D006277 ORTHO05D007673 1.0e-46 191.8 420 40.0
ECA238G0260 Erigeron canadensis HOM05D006277 ORTHO05D007673 2.3e-46 190.7 216 60.6
AUR62028116 Chenopodium quinoa HOM05D006277 ORTHO05D007673 5.1e-46 189.5 413 41.4
HanXRQChr04g0117941 Helianthus annuus HOM05D006277 ORTHO05D007673 8.7e-46 188.7 212 57.1
Gohir.D08G117800 Gossypium hirsutum HOM05D006277 ORTHO05D007673 2.5e-45 187.2 310 44.2
Solyc03g079950.4 Solanum lycopersicum HOM05D006277 ORTHO05D007673 2.5e-45 187.2 391 41.7
ClCG07G009750 Citrullus lanatus HOM05D006277 ORTHO05D007673 9.6e-45 185.3 444 40.5
Nitab4.5_0007121g0020 Nicotiana tabacum HOM05D006277 ORTHO05D007673 8.1e-44 182.2 373 41.3
Peaxi162Scf01026g00268 Petunia axillaris HOM05D006277 ORTHO05D007673 1.1e-43 181.8 426 39.7
Sed0010003 Sechium edule HOM05D006277 ORTHO05D007673 1.4e-43 181.4 437 37.8
LjContig00312_ERROPOS870357g0003049 Lotus japonicus HOM05D006277 ORTHO05D007673 4.0e-43 179.9 304 46.4
Cfa016128 Carpinus fangiana HOM05D006277 ORTHO05D007673 5.3e-43 179.5 332 43.1
CsaV3_2G019700 Cucumis sativus L. HOM05D006277 ORTHO05D007673 5.3e-43 179.5 427 41.2
Prupe.2G322100 Prunus persica HOM05D006277 ORTHO05D007673 6.9e-43 179.1 414 38.9
Actinidia08720 Actinidia chinensis HOM05D006277 ORTHO05D007673 1.5e-42 177.9 306 44.4
Nitab4.5_0000021g0190 Nicotiana tabacum HOM05D006277 ORTHO05D007673 4.5e-42 176.4 339 43.1
AUR62030650 Chenopodium quinoa HOM05D006277 ORTHO05D007673 7.6e-42 175.6 260 49.2
HPP92_017121 Vanilla planifolia HOM05D006277 ORTHO05D007673 9.9e-42 175.3 254 48.0
MELO3C023191.2 Cucumis melo HOM05D006277 ORTHO05D007673 1.3e-41 174.9 350 42.6
PSO384G3009 Papaver somniferum HOM05D006277 ORTHO05D007673 1.7e-41 174.5 303 46.5
Eucgr.K00479 Eucalyptus grandis HOM05D006277 ORTHO05D007673 2.2e-41 174.1 331 41.4
CDE02G3091 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 8.4e-41 172.2 228 53.9
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 2.4e-40 170.6 406 40.1
arahy.Tifrunner.gnm1.ann1.T9XRV5 Arachis hypogaea HOM05D006277 ORTHO05D007673 2.4e-40 170.6 280 46.8
Cc02_g00600 Coffea canephora HOM05D006277 ORTHO05D007673 2.4e-40 170.6 413 39.0
Os02g0147100 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 3.2e-40 170.2 353 37.7
Os02g0147700 Oryza sativa ssp. japonica HOM05D006277 ORTHO05D007673 4.2e-40 169.9 381 37.0
HPP92_017116 Vanilla planifolia HOM05D006277 ORTHO05D007673 4.2e-40 169.9 305 43.6
PSO063G0207 Papaver somniferum HOM05D006277 ORTHO05D007673 3.5e-39 166.8 404 39.1
Aqoxy7G02781 Aquilegia oxysepala HOM05D006277 ORTHO05D007673 8.7e-38 162.2 413 36.8
ATR0626G063 Amborella trichopoda HOM05D006277 ORTHO05D007673 1.5e-37 161.4 238 43.3
PSO170G0956 Papaver somniferum HOM05D006277 ORTHO05D007673 1.5e-37 161.4 404 38.4
SEGI_26440 Sequoiadendron giganteum HOM05D006277 ORTHO05D007673 2.5e-37 160.6 410 34.1
MBI16_g10337_MAGBIO Magnolia biondii HOM05D006277 ORTHO05D007673 5.6e-37 159.5 418 36.1
Zm00001eb232230 Zea mays HOM05D006277 ORTHO05D007673 9.6e-37 158.7 262 43.5
DCAR_010558 Daucus carota HOM05D006277 ORTHO05D007673 4.5e-34 149.8 430 37.0
arahy.Tifrunner.gnm1.ann1.Z5WHM0 Arachis hypogaea HOM05D006277 ORTHO05D007673 4.6e-31 139.8 390 36.9
Pp3c7_3940 Physcomitrium patens HOM05D006277 ORTHO05D007673 1.0e-30 138.7 206 45.6
Pp3c11_21910 Physcomitrium patens HOM05D006277 ORTHO05D007673 3.3e-29 133.7 200 44.0
Mapoly0143s0029 Marchantia polymorpha HOM05D006277 ORTHO05D007673 1.3e-28 131.7 432 30.8
Oeu010718.2 Olea europaea HOM05D006277 ORTHO05D007673 3.7e-28 130.2 514 32.3
PSO384G0555 Papaver somniferum HOM05D006277 ORTHO05D007673 6.2e-28 129.4 160 53.8
CBR_g24064 Chara braunii HOM05D006277 ORTHO05D007673 5.5e-24 116.3 227 38.8
CBR_g39579 Chara braunii HOM05D000601 ORTHO05D007673 3.0e-22 110.5 110 52.7
AagrBONN_evm.TU.Sc2ySwM_362.1883 Anthoceros agrestis HOM05D006277 ORTHO05D007673 3.3e-21 107.1 438 30.8
Nn7g37003 Nelumbo nucifera HOM05D006277 ORTHO05D007673 3.3e-21 107.1 323 33.4
CBR_g31160 Chara braunii HOM05D006277 ORTHO05D007673 1.6e-20 104.8 137 46.0
Potri.015G000701 Populus trichocarpa HOM05D006277 ORTHO05D007673 6.3e-20 102.8 137 50.4
CDE06G1557 Ceratophyllum demersum HOM05D006277 ORTHO05D007673 2.2e-17 94.4 314 31.8
CiPaw.10G123600 Carya illinoinensis HOM05D006277 ORTHO05D007673 8.5e-09 65.9 61 60.7
MCO04G384 Micromonas commoda HOM05D006277 ORTHO05D007673 5.5e-08 63.2 161 31.7
Nn5g26949 Nelumbo nucifera HOM05D006277 ORTHO05D007673 5.5e-08 63.2 76 46.1
Cre02.g105050 Chlamydomonas reinhardtii HOM05D006277 ORTHO05D007673 3.6e-07 60.5 144 31.9


User provided reference genes

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