Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.7e-73 279.3 145 100.0
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.4e-70 269.6 145 95.2
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 5.2e-70 267.7 145 94.5
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 5.2e-70 267.7 145 94.5
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 5.2e-70 267.7 145 94.5
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 5.2e-70 267.7 145 94.5
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 5.2e-70 267.7 145 94.5
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.2e-69 266.5 145 94.5
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.5e-69 266.2 145 93.8
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 1.5e-69 266.2 145 94.5
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 2.0e-69 265.8 145 93.8
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 2.6e-69 265.4 145 93.8
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.3e-68 263.1 145 92.4
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.3e-68 263.1 145 91.7
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.3e-68 263.1 145 93.8
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 1.7e-68 262.7 145 91.7
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 3.7e-68 261.5 145 92.4
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 4.9e-68 261.2 145 91.7
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 4.9e-68 261.2 145 91.0
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 8.3e-68 260.4 145 90.3
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 2.4e-67 258.8 145 89.7
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 3.2e-67 258.5 145 90.3
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 4.6e-66 254.6 145 89.7
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 2.1e-63 245.7 145 86.2
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 5.2e-62 241.1 145 86.9
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 5.2e-62 241.1 146 83.6
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 3.4e-61 238.4 145 85.5
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 9.9e-61 236.9 145 84.8
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 1.3e-60 236.5 145 84.1
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 1.3e-60 236.5 145 84.1
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 6.4e-60 234.2 145 81.4
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 8.3e-60 233.8 143 82.5
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 8.3e-60 233.8 143 82.5
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.4e-59 233.0 145 83.4
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.9e-59 232.6 145 82.8
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 3.2e-59 231.9 145 82.1
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 5.4e-59 231.1 143 82.5
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 7.1e-59 230.7 145 80.7
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 9.2e-59 230.3 146 82.2
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 9.2e-59 230.3 145 81.4
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 9.2e-59 230.3 158 78.5
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 83.4
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.5e-58 228.4 146 81.5
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 3.5e-58 228.4 146 81.5
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 3.5e-58 228.4 146 82.9
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 4.6e-58 228.0 145 82.1
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 4.6e-58 228.0 147 80.3
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 7.8e-58 227.3 134 84.3
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.3e-57 226.5 145 78.6
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.7e-57 226.1 143 80.4
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 3.0e-57 225.3 146 80.8
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 3.0e-57 225.3 147 79.6
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 3.9e-57 224.9 145 79.3
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 5.1e-57 224.6 142 82.4
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 6.6e-57 224.2 141 80.9
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 8.6e-57 223.8 145 82.1
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.1e-56 223.4 146 80.1
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.5e-56 223.0 132 84.8
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 1.5e-56 223.0 147 78.9
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 2.5e-56 222.2 145 80.0
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 3.3e-56 221.9 132 84.1
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 5.6e-56 221.1 145 78.6
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 7.3e-56 220.7 146 80.8
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 9.5e-56 220.3 145 78.6
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 9.5e-56 220.3 145 78.6
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 9.5e-56 220.3 147 78.2
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 9.5e-56 220.3 143 79.0
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.2e-55 219.9 144 81.2
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 1.6e-55 219.5 147 79.6
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.1e-55 219.2 130 84.6
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 2.1e-55 219.2 146 77.4
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.8e-55 218.8 145 77.9
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 2.8e-55 218.8 145 79.3
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 3.6e-55 218.4 130 83.8
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 4.7e-55 218.0 145 80.7
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 8.1e-55 217.2 145 80.0
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.4e-54 215.7 145 77.2
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.5e-53 213.0 146 76.7
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 2.0e-53 212.6 145 77.9
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.6e-53 212.2 145 77.9
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 5.8e-53 211.1 145 77.2
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 5.8e-53 211.1 142 76.8
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 7.6e-53 210.7 146 75.3
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.7e-52 209.5 145 75.9
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.2e-52 209.1 143 79.0
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 3.8e-52 208.4 145 75.2
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 3.8e-52 208.4 147 76.9
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 3.8e-52 208.4 147 77.6
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 3.8e-52 208.4 147 75.5
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 3.8e-52 208.4 147 78.2
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 6.4e-52 207.6 145 77.2
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 8.4e-52 207.2 149 76.5
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 8.4e-52 207.2 147 75.5
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.1e-51 206.8 147 75.5
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 1.4e-51 206.5 148 75.7
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 1.4e-51 206.5 147 76.9
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 4.1e-51 204.9 147 77.6
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 5.4e-51 204.5 123 81.3
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.2e-50 203.4 147 75.5
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 1.2e-50 203.4 147 75.5
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 3.5e-50 201.8 145 75.9
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.5e-50 201.8 146 74.0
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 3.5e-50 201.8 146 74.0
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 3.5e-50 201.8 146 75.3
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 4.6e-50 201.4 144 75.0
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 4.6e-50 201.4 147 74.8
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 6.0e-50 201.1 128 82.0
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 6.0e-50 201.1 146 76.0
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.0e-49 200.3 147 76.2
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.7e-49 199.5 143 74.8
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 3.0e-49 198.7 143 75.5
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 3.0e-49 198.7 147 75.5
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 3.9e-49 198.4 201 57.7
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 5.1e-49 198.0 136 79.4
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.1e-49 198.0 146 73.3
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 1.9e-48 196.1 153 70.6
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 4.3e-48 194.9 146 76.0
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 4.3e-48 194.9 146 76.0
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 7.3e-48 194.1 147 74.1
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 9.6e-48 193.7 145 73.8
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.2e-47 193.4 133 78.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 2.8e-47 192.2 148 73.0
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 2.8e-47 192.2 146 74.7
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.8e-46 189.5 148 72.3
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 3.1e-46 188.7 146 73.3
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 3.1e-46 188.7 146 73.3
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 3.1e-46 188.7 146 73.3
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 4.0e-46 188.3 147 70.7
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 1.2e-45 186.8 144 71.5
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 2.6e-45 185.7 145 72.4
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 1.3e-44 183.3 183 61.2
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 4.9e-44 181.4 145 69.0
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.4e-44 181.0 151 68.9
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 1.1e-43 180.3 168 60.7
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 5.4e-43 177.9 121 81.0
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 3.5e-42 175.3 143 69.9
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 1.3e-41 173.3 145 68.3
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.7e-41 172.9 145 68.3
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.3e-41 172.6 145 66.9
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 5.1e-41 171.4 150 66.7
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 8.7e-41 170.6 137 72.3
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.1e-40 170.2 133 70.7
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.9e-40 169.5 145 66.9
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 5.6e-40 167.9 146 67.8
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 7.3e-40 167.5 155 64.5
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 9.6e-40 167.2 145 68.3
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.3e-39 166.8 91 86.8
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 3.6e-39 165.2 132 70.5
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.5e-37 159.8 144 64.6
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 2.0e-37 159.5 123 75.6
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 9.9e-37 157.1 143 68.5
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 9.9e-37 157.1 111 74.8
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.3e-36 156.8 91 83.5
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 2.9e-36 155.6 132 65.2
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 4.9e-36 154.8 128 73.4
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 4.2e-35 151.8 123 73.2
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 7.9e-34 147.5 115 73.0
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 1.3e-31 140.2 104 76.9
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 4.8e-31 138.3 123 69.1
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.4e-30 136.7 82 78.0
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 2.4e-30 136.0 98 72.4
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 2.4e-30 136.0 99 76.8
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 9.0e-30 134.0 123 60.2
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 1.7e-28 129.8 143 53.1
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 8.4e-28 127.5 133 57.9
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.7e-25 117.9 69 79.7
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.5e-24 116.7 64 85.9
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.3e-23 113.6 123 61.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.3e-23 113.6 123 61.0
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 2.8e-23 112.5 101 73.3
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-22 110.5 133 51.9
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-22 110.5 133 53.4
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.1e-22 110.5 107 67.3
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 2.0e-21 106.3 80 70.0
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-20 103.6 76 71.1
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-20 103.6 77 70.1
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.4e-19 100.1 145 49.0
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 9.3e-19 97.4 81 65.4
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.2e-18 97.1 82 62.2
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 8.7e-17 90.9 45 88.9
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 2.6e-13 79.3 76 63.2
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 3.0e-09 65.9 35 94.3


User provided reference genes

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