Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g03820 Schrenkiella parvula HOM05D003757 ORTHO05D371139 1.5e-49 199.1 96 100.0
BcaNung05342 Brassica carinata HOM05D003757 ORTHO05D004892 3.6e-11 71.6 38 84.2
Thhalv10023529m.g Eutrema salsugineum HOM05D003757 ORTHO05D004892 1.8e-10 69.3 38 81.6
A09p17200 Brassica napus HOM05D003757 ORTHO05D004892 3.1e-10 68.6 38 81.6
BraA09t37353Z Brassica rapa HOM05D003757 ORTHO05D004892 3.1e-10 68.6 38 81.6
Carub.0002s0447 Capsella rubella HOM05D003757 ORTHO05D004892 1.3e-08 63.2 38 73.7
BcaC04g22274 Brassica carinata HOM05D003757 ORTHO05D004892 1.7e-08 62.8 38 76.3
C09p21330 Brassica napus HOM05D003757 ORTHO05D004892 1.7e-08 62.8 38 76.3
BolC9t55041H Brassica oleracea HOM05D003757 ORTHO05D004892 1.7e-08 62.8 38 76.3
AT1G60850 Arabidopsis thaliana HOM05D003757 ORTHO05D004892 3.8e-08 61.6 38 71.1
Thhalv10025407m.g Eutrema salsugineum HOM05D003757 ORTHO05D004892 3.8e-08 61.6 37 75.7
CARHR051870 Cardamine hirsuta HOM05D003757 ORTHO05D004892 6.4e-08 60.8 36 69.4
BcaC09g49388 Brassica carinata HOM05D003757 ORTHO05D004892 8.4e-08 60.5 37 70.3
C01p37170 Brassica napus HOM05D003757 ORTHO05D004892 8.4e-08 60.5 37 70.3
BolC1t03686H Brassica oleracea HOM05D003757 ORTHO05D004892 8.4e-08 60.5 37 70.3
BcaC06g31813 Brassica carinata HOM05D003757 ORTHO05D004892 1.1e-07 60.1 46 60.9
Sp2g04130 Schrenkiella parvula HOM05D003757 ORTHO05D004892 3.2e-07 58.5 36 69.4
A01p29390 Brassica napus HOM05D003757 ORTHO05D004892 5.4e-07 57.8 37 67.6
BraA01t03073Z Brassica rapa HOM05D003757 ORTHO05D004892 5.4e-07 57.8 37 67.6
AL2G15670 Arabidopsis lyrata HOM05D003757 ORTHO05D004892 7.1e-07 57.4 38 65.8
BcaC02g10623 Brassica carinata HOM05D003757 ORTHO05D004892 1.6e-06 56.2 37 64.9
C04p25880 Brassica napus HOM05D003757 ORTHO05D004892 1.6e-06 56.2 37 64.9
C05p51040 Brassica napus HOM05D003757 ORTHO05D004892 1.6e-06 56.2 37 64.9
BolC4t24221H Brassica oleracea HOM05D003757 ORTHO05D004892 1.6e-06 56.2 37 64.9
CARHR052350 Cardamine hirsuta HOM05D003757 ORTHO05D004892 3.5e-06 55.1 37 64.9
AL2G15980 Arabidopsis lyrata HOM05D003757 ORTHO05D004892 4.6e-06 54.7 37 62.2
Carub.0007s3207 Capsella rubella HOM05D003757 ORTHO05D004892 6.0e-06 54.3 37 62.2


User provided reference genes

Program Settings