Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp2g01080 Schrenkiella parvula HOM05D011055 ORTHO05D013192 4.3e-282 974.2 553 100.0
C09p16390 Brassica napus HOM05D011055 ORTHO05D013192 4.4e-85 319.7 536 48.9
BraA09t37027Z Brassica rapa HOM05D011055 ORTHO05D013192 1.6e-79 301.2 523 45.9
A09p13750 Brassica napus HOM05D011055 ORTHO05D013192 3.2e-75 287.0 533 47.1
A09p13730 Brassica napus HOM05D011055 ORTHO05D013192 7.1e-59 232.6 524 40.5
BolC9t54549H Brassica oleracea HOM05D011055 ORTHO05D013192 7.1e-59 232.6 548 40.1
BraA09t37024Z Brassica rapa HOM05D011055 ORTHO05D013192 7.1e-59 232.6 536 40.5
Thhalv10023337m.g Eutrema salsugineum HOM05D011055 ORTHO05D013192 9.3e-59 232.3 692 36.6
BcaC02g10385 Brassica carinata HOM05D011055 ORTHO05D013192 2.0e-53 214.5 467 42.0
C04p29490 Brassica napus HOM05D011055 ORTHO05D013192 2.0e-53 214.5 467 42.0
AL2G11680 Arabidopsis lyrata HOM05D011055 ORTHO05D013192 4.9e-44 183.3 549 35.7
AL2G11670 Arabidopsis lyrata HOM05D011055 ORTHO05D013192 1.6e-34 151.8 662 33.7
CARHR047830 Cardamine hirsuta HOM05D011055 ORTHO05D013192 5.0e-28 130.2 530 34.5
AT1G63530 Arabidopsis thaliana HOM05D011055 ORTHO05D013192 5.5e-27 126.7 547 33.6
C09p16380 Brassica napus HOM05D011055 ORTHO05D013192 1.6e-26 125.2 245 40.8
AT1G63540 Arabidopsis thaliana HOM05D011055 ORTHO05D013192 3.6e-26 124.0 554 32.7
Carub.0002s0133 Capsella rubella HOM05D011055 ORTHO05D013192 6.1e-26 123.2 393 36.4
CARHR047840 Cardamine hirsuta HOM05D011055 ORTHO05D013192 8.5e-20 102.8 456 34.9
CiPaw.11G107700 Carya illinoinensis HOM05D002142 ORTHO05D001189 1.4e-09 68.9 209 34.4
Hund10364 Selenicereus undatus HOM05D002142 ORTHO05D001189 3.9e-09 67.4 185 36.8
Nn4g25332 Nelumbo nucifera HOM05D002142 ORTHO05D001189 5.2e-09 67.0 109 49.5
Nn4g25267 Nelumbo nucifera HOM05D002142 ORTHO05D001189 8.8e-09 66.2 109 48.6
Sabra11G0134000 Salix brachista HOM05D002142 ORTHO05D001189 8.8e-09 66.2 172 32.6
Haze_09224 Corylus avellana HOM05D002142 ORTHO05D001189 1.1e-08 65.9 166 35.5
Lsat_1_v5_gn_6_80720 Lactuca sativa HOM05D002142 ORTHO05D001189 1.1e-08 65.9 213 33.3
CANSAT01G1306 Cannabis sativa HOM05D002142 ORTHO05D001189 2.0e-08 65.1 135 35.6
QL02p026881 Quercus lobata HOM05D002142 ORTHO05D001189 2.6e-08 64.7 162 34.6
TWI15G0084 Tripterygium wilfordii HOM05D002142 ORTHO05D001189 2.6e-08 64.7 106 43.4
Sabra16G0306300 Salix brachista HOM05D002142 ORTHO05D001189 3.3e-08 64.3 255 30.6
Dinv08692 Davidia involucrata HOM05D002142 ORTHO05D001189 4.4e-08 63.9 82 48.8
Potri.011G148800 Populus trichocarpa HOM05D002142 ORTHO05D001189 7.4e-08 63.2 198 31.8
TAR365G0293 Trochodendron aralioides HOM05D002142 ORTHO05D001189 7.4e-08 63.2 121 40.5
Lj2g0014417 Lotus japonicus HOM05D002142 ORTHO05D001189 1.3e-07 62.4 101 41.6
Sed0006864 Sechium edule HOM05D002142 ORTHO05D001189 1.7e-07 62.0 116 38.8
CDE02G3369 Ceratophyllum demersum HOM05D002142 ORTHO05D001189 2.2e-07 61.6 97 43.3
Lsat_1_v5_gn_6_80660 Lactuca sativa HOM05D002142 ORTHO05D001189 2.2e-07 61.6 110 40.9
Lj2A149G60 Lonicera japonica HOM05D002142 ORTHO05D001189 2.2e-07 61.6 173 34.7
Atru.chr9.1824 Acer truncatum HOM05D002142 ORTHO05D001189 4.8e-07 60.5 212 33.0
Aqoxy1G00933 Aquilegia oxysepala HOM05D002142 ORTHO05D001189 4.8e-07 60.5 184 35.9
AUR62006045 Chenopodium quinoa HOM05D002142 ORTHO05D001189 4.8e-07 60.5 60 50.0
AUR62035583 Chenopodium quinoa HOM05D002142 ORTHO05D001189 4.8e-07 60.5 60 50.0
Thhalv10023238m.g Eutrema salsugineum HOM05D002142 ORTHO05D001189 4.8e-07 60.5 159 32.7
Glyma.13G264100 Glycine max HOM05D002142 ORTHO05D001189 4.8e-07 60.5 133 36.1
Lj5g0019010 Lotus japonicus HOM05D002142 ORTHO05D001189 4.8e-07 60.5 103 42.7
Rhsim11G0111000 Rhododendron simsii HOM05D002142 ORTHO05D019492 4.8e-07 60.5 211 31.3
Ciclev10000333m.g Citrus clementina HOM05D002142 ORTHO05D001189 8.2e-07 59.7 102 41.2
MBI18_g28921_MAGBIO Magnolia biondii HOM05D002142 ORTHO05D001189 8.2e-07 59.7 192 33.3
DCAR_023771 Daucus carota HOM05D002142 ORTHO05D001189 1.1e-06 59.3 217 35.0
PSO761G0484 Papaver somniferum HOM05D002142 ORTHO05D001189 1.1e-06 59.3 211 35.1
Psat6g052800 Pisum sativum HOM05D002142 ORTHO05D001189 1.1e-06 59.3 154 34.4
unitig_62.g23266 Utricularia gibba HOM05D002142 ORTHO05D001189 1.1e-06 59.3 110 40.9
Carub.0002s0577 Capsella rubella HOM05D002142 ORTHO05D001189 1.4e-06 58.9 113 36.3
Gohir.D03G088800 Gossypium hirsutum HOM05D002142 ORTHO05D001189 1.4e-06 58.9 144 36.8
Gorai.003G072900 Gossypium raimondii HOM05D002142 ORTHO05D001189 1.4e-06 58.9 144 36.8
Lalb_Chr02g0149531 Lupinus albus HOM05D002142 ORTHO05D001189 1.4e-06 58.9 106 40.6
vmacro11473 Vaccinium macrocarpon HOM05D002142 ORTHO05D001189 1.4e-06 58.9 167 33.5
Cc08_g17090 Coffea canephora HOM05D002142 ORTHO05D001189 1.8e-06 58.5 78 43.6
vmacro19801 Vaccinium macrocarpon HOM05D002142 ORTHO05D001189 1.8e-06 58.5 103 36.9
GSVIVG01019716001 Vitis vinifera HOM05D002142 ORTHO05D001189 1.8e-06 58.5 111 43.2
BcaC05g24889 Brassica carinata HOM05D002142 ORTHO05D001189 2.4e-06 58.2 213 30.0
BolC5t29604H Brassica oleracea HOM05D002142 ORTHO05D001189 2.4e-06 58.2 213 30.0
Ciclev10018664m.g Citrus clementina HOM05D002142 ORTHO05D001189 2.4e-06 58.2 134 35.1
Migut.E00710 Erythranthe guttata HOM05D002142 ORTHO05D001189 2.4e-06 58.2 203 31.5
Glyma.12G235000 Glycine max HOM05D002142 ORTHO05D001189 3.1e-06 57.8 106 42.5
Gorai.004G127800 Gossypium raimondii HOM05D002142 ORTHO05D001189 3.1e-06 57.8 250 30.4
arahy.Tifrunner.gnm1.ann1.C9MEAE Arachis hypogaea HOM05D002142 ORTHO05D001189 4.1e-06 57.4 75 48.0
Oeu063646.1 Olea europaea HOM05D002142 ORTHO05D001189 4.1e-06 57.4 98 43.9
PSO210G2933 Papaver somniferum HOM05D002142 ORTHO05D001189 4.1e-06 57.4 170 34.1
vmacro00882 Vaccinium macrocarpon HOM05D002142 ORTHO05D001189 4.1e-06 57.4 223 30.5
Aa31LG2G10460 Aethionema arabicum HOM05D002142 ORTHO05D001189 5.3e-06 57.0 224 31.7
ATR0796G136 Amborella trichopoda HOM05D002142 ORTHO05D001189 5.3e-06 57.0 103 42.7
AL1G21160 Arabidopsis lyrata HOM05D002142 ORTHO05D001189 5.3e-06 57.0 125 37.6
arahy.Tifrunner.gnm1.ann1.L5AWWV Arachis hypogaea HOM05D002142 ORTHO05D001189 5.3e-06 57.0 183 33.9
BcaB07g31171 Brassica carinata HOM05D002142 ORTHO05D001189 5.3e-06 57.0 97 42.3
Manes.01G000031 Manihot esculenta HOM05D002142 ORTHO05D001189 5.3e-06 57.0 74 45.9
Medtr1g078040 Medicago truncatula HOM05D002142 ORTHO05D001189 5.3e-06 57.0 167 32.3
CsaV3_2G036160 Cucumis sativus L. HOM05D002142 ORTHO05D001189 7.0e-06 56.6 141 34.8
Potri.001G453200 Populus trichocarpa HOM05D002142 ORTHO05D001189 7.0e-06 56.6 227 29.5
Rhsim02G0255400 Rhododendron simsii HOM05D002142 ORTHO05D001189 7.0e-06 56.6 160 33.1
Sp2g04870 Schrenkiella parvula HOM05D002142 ORTHO05D001189 7.0e-06 56.6 99 39.4
C05p08540 Brassica napus HOM05D002142 ORTHO05D001189 9.1e-06 56.2 100 37.0
Oeu020470.1 Olea europaea HOM05D002142 ORTHO05D001189 9.1e-06 56.2 173 31.8
Os12g0165900 Oryza sativa ssp. japonica HOM05D002142 ORTHO05D001189 9.1e-06 56.2 200 30.5
Solyc04g007280.3 Solanum lycopersicum HOM05D002142 ORTHO05D001189 9.1e-06 56.2 95 40.0
Sopen04g002340 Solanum pennellii HOM05D002142 ORTHO05D001189 9.1e-06 56.2 95 40.0


User provided reference genes

Program Settings