Gene: Lj5g0019010

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj5g0019010
  • Transcript Identifier Lj5g0019010.1
  • Gene Type Coding gene
  • Location chr5 : 18205744-18211874 : positive

Gene Family Information

  • ID HOM05D002142
  • #Genes/#Species 313/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj5g0019010.Lj1.0v1
  • pacid 44926990

Descriptions

  • Description K14297 - nuclear pore complex protein Nup98-Nup96 (NUP98, ADAR2, NUP116)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006913
IEA
InterPronucleocytoplasmic transport
GO:0006406
ISO
PLAZA Integrative OrthologymRNA export from nucleus AT1G10390
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT1G10390
GO:1902446
ISO
PLAZA Integrative Orthologyregulation of shade avoidance AT1G10390

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IEA
InterProstructural constituent of nuclear pore
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G10390

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005643
IEA
InterPronuclear pore
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT1G10390
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G10390
GO:0031965
ISO
PLAZA Integrative Orthologynuclear membrane AT1G10390
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G10390

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR036903 Peptidase S59, nucleoporin superfamily
IPR007230 Peptidase S59, nucleoporin
IPR037665 Nucleoporin peptidase S59-like
Mapman id Description
23.5.1.1.6.1 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.nucleoporin (NUP98)