Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 1.3e-195 687.2 484 100.0
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 4.6e-169 599.0 476 92.2
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 1.7e-168 597.0 475 93.1
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 3.3e-167 592.8 475 92.2
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 4.3e-167 592.4 474 92.2
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 1.4e-165 587.4 475 91.2
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 1.2e-164 584.3 475 90.9
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 1.2e-164 584.3 475 90.9
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 3.8e-155 552.7 475 88.4
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 1.4e-149 534.3 475 86.5
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 1.2e-148 531.2 475 86.3
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 6.4e-147 525.4 439 91.1
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 5.5e-114 416.0 431 62.2
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 8.2e-110 402.1 458 74.0
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 9.1e-109 398.7 467 71.9
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 3.4e-108 396.7 469 71.4
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 2.9e-107 393.7 456 72.8
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 1.1e-106 391.7 452 73.0
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 1.4e-106 391.3 454 73.6
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 1.4e-106 391.3 469 71.4
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 2.5e-106 390.6 456 72.6
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 3.2e-106 390.2 465 71.4
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 9.4e-106 388.7 464 71.1
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 3.6e-105 386.7 472 71.0
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 1.4e-104 384.8 456 71.9
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 2.3e-104 384.0 456 72.4
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 6.7e-104 382.5 462 71.9
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 2.6e-103 380.6 451 72.3
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 4.8e-102 376.3 476 68.7
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 7.0e-101 372.5 458 71.4
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 3.5e-100 370.2 442 71.5
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 3.8e-99 366.7 447 72.5
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 4.2e-98 363.2 454 71.1
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 5.5e-98 362.8 456 71.3
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 3.3e-95 353.6 451 69.4
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 2.2e-94 350.9 442 70.1
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 3.7e-94 350.1 433 71.8
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 1.1e-93 348.6 434 72.8
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 1.1e-93 348.6 473 66.0
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 1.4e-93 348.2 438 72.4
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 5.3e-93 346.3 451 71.2
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 9.1e-93 345.5 408 75.2
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.2e-92 345.1 457 67.0
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 2.0e-92 344.4 451 69.0
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 1.7e-91 341.3 446 70.0
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 1.7e-91 341.3 427 72.8
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 5.5e-90 336.3 423 72.1
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.6e-89 334.7 458 67.0
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.6e-89 334.7 458 67.0
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 8.0e-89 332.4 435 71.7
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 3.0e-88 330.5 458 67.9
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 8.8e-88 328.9 416 63.7
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 1.2e-87 328.6 460 66.5
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 1.5e-87 328.2 436 68.8
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 5.7e-87 326.2 420 71.9
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 5.7e-87 326.2 444 67.1
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 2.2e-86 324.3 451 67.4
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 1.4e-85 321.6 442 68.1
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 1.8e-85 321.2 426 70.7
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.5e-84 316.6 457 67.0
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 4.5e-84 316.6 462 65.8
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.3e-83 315.1 457 67.2
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.3e-83 315.1 414 71.3
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.2e-83 314.3 457 63.9
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 5.0e-83 313.2 454 66.3
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.5e-82 311.6 541 49.9
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 1.5e-82 311.6 471 65.8
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 5.5e-82 309.7 415 72.0
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 7.2e-82 309.3 401 71.6
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 1.2e-81 308.5 413 70.7
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 1.6e-81 308.1 458 65.3
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 1.3e-78 298.5 410 71.5
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 8.3e-78 295.8 410 71.2
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 2.0e-76 291.2 416 69.2
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 3.5e-76 290.4 440 65.2
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 3.5e-76 290.4 440 65.2
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 5.9e-76 289.7 445 64.7
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 7.7e-76 289.3 438 65.5
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 5.0e-75 286.6 445 64.3
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 8.6e-75 285.8 455 63.5
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 1.5e-74 285.0 436 65.4
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 4.2e-74 283.5 455 47.0
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 4.0e-72 276.9 450 63.8
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.7e-67 261.5 426 64.6
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 1.9e-66 258.1 459 59.7
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.0e-64 252.3 232 58.2
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 6.0e-60 236.5 391 62.1
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 1.1e-58 232.3 119 97.5
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 2.0e-55 221.5 228 55.7
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 3.0e-51 207.6 193 58.5
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.4e-45 186.8 119 72.3
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 7.8e-44 183.0 118 72.9
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 2.0e-39 168.3 118 70.3
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 3.5e-36 157.5 102 71.6
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 1.3e-35 155.6 267 78.3
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 1.3e-35 155.6 410 57.3
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 7.3e-34 149.8 105 68.6
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.0e-31 141.7 132 56.1
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.1e-26 125.9 227 39.6
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 1.1e-26 125.9 435 51.3
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 1.1e-24 119.4 106 52.8
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 4.5e-23 114.0 75 72.0
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.8e-22 110.9 73 68.5
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.5e-20 104.4 68 69.1
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 2.1e-17 95.1 152 40.8


User provided reference genes

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