Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 5.7e-242 840.5 423 100.0
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 6.1e-228 793.9 423 93.1
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.3e-225 786.2 423 92.9
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 2.8e-225 785.0 423 92.7
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 4.8e-225 784.3 423 92.7
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 6.3e-225 783.9 423 92.4
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 4.0e-219 764.6 423 90.1
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.1e-212 742.3 423 88.9
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 3.6e-212 741.5 423 87.7
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 6.8e-211 737.3 423 87.5
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 6.8e-211 737.3 423 85.3
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 7.5e-194 680.6 421 80.3
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.4e-192 675.6 420 81.0
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 9.5e-181 637.1 421 74.8
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 9.5e-181 637.1 424 74.1
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.2e-178 630.2 421 74.1
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 2.6e-178 629.0 423 73.5
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 7.6e-178 627.5 421 74.3
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.3e-177 626.7 419 74.2
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.9e-176 622.9 423 72.6
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 9.2e-176 620.5 424 72.6
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.2e-175 620.2 421 74.3
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.1e-175 619.4 421 73.9
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 2.1e-175 619.4 424 72.6
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 2.1e-175 619.4 424 71.9
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 4.6e-175 618.2 425 71.5
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 4.6e-175 618.2 424 72.6
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.7e-174 616.3 422 73.5
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.0e-174 615.5 425 71.3
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 3.0e-174 615.5 454 69.2
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 8.7e-174 614.0 422 72.7
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.1e-173 613.6 423 72.8
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.1e-173 613.6 423 72.6
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.9e-173 612.8 421 72.7
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 5.6e-173 611.3 422 72.3
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 7.3e-173 610.9 425 71.5
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.6e-172 609.8 421 71.7
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.6e-172 608.6 422 71.6
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.1e-171 607.1 423 70.4
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.4e-171 606.7 421 70.8
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.4e-171 605.9 425 69.4
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 2.4e-171 605.9 422 71.6
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 3.1e-171 605.5 427 71.7
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 3.1e-171 605.5 423 71.9
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 6.9e-171 604.4 422 72.3
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 1.2e-170 603.6 423 72.1
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 2.0e-170 602.8 425 69.2
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.0e-170 602.8 423 70.2
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 9.9e-170 600.5 422 71.1
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 3.8e-169 598.6 423 70.2
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 6.4e-169 597.8 443 69.1
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.4e-168 596.7 421 70.3
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.4e-168 594.7 421 70.1
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 9.3e-168 594.0 421 69.8
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.6e-167 593.2 422 69.0
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 2.1e-167 592.8 421 69.8
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 2.1e-167 592.8 421 69.8
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 1.3e-166 590.1 431 69.8
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.7e-166 589.7 422 69.9
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.9e-166 588.6 426 68.8
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 1.1e-165 587.0 416 70.4
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 2.5e-165 585.9 431 69.6
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 2.5e-165 585.9 421 70.5
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.3e-165 585.5 424 68.2
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.3e-165 585.5 426 68.5
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 5.6e-165 584.7 424 67.9
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 9.6e-165 583.9 423 68.8
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 1.6e-164 583.2 424 67.9
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 2.1e-164 582.8 424 67.7
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 4.8e-164 581.6 423 67.1
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.1e-163 580.5 452 66.2
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.1e-163 580.5 424 67.2
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 1.2e-162 577.0 471 62.4
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 2.6e-162 575.9 420 68.6
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 3.4e-162 575.5 425 67.3
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.3e-161 573.5 423 69.3
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 2.9e-161 572.4 422 67.1
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 6.4e-161 571.2 422 67.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 8.4e-161 570.9 425 67.1
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.9e-160 569.7 447 64.0
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 2.4e-160 569.3 425 65.4
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 3.2e-160 568.9 421 68.2
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.6e-159 566.6 425 66.6
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 7.9e-159 564.3 421 64.4
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 1.3e-158 563.5 532 57.3
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 5.1e-158 561.6 423 65.5
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 5.1e-158 561.6 423 65.5
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 1.9e-157 559.7 423 65.5
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 2.1e-156 556.2 421 64.1
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 4.8e-156 555.1 421 67.2
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.5e-154 550.1 422 67.1
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 2.0e-154 549.7 422 67.1
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 3.4e-154 548.9 421 64.4
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 9.9e-154 547.4 422 66.8
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 2.9e-153 545.8 421 65.6
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.2e-151 540.4 422 65.2
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 1.0e-150 537.3 423 62.4
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 3.8e-145 518.8 425 61.2
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 4.9e-145 518.5 418 62.0
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 4.2e-144 515.4 423 65.5
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 9.3e-144 514.2 421 58.7
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 2.8e-140 502.7 422 60.4
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 2.5e-136 489.6 337 74.2
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 2.5e-136 489.6 431 57.3
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 3.6e-135 485.7 424 57.3
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 1.4e-134 483.8 422 60.0
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 2.2e-129 466.5 423 59.8
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 3.6e-127 459.1 358 64.2
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.4e-126 457.2 426 55.2
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 3.0e-126 456.1 290 75.2
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.0e-125 453.4 427 53.6
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 8.0e-119 431.4 351 62.7
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 4.1e-115 419.1 426 56.3
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 7.0e-115 418.3 427 48.7
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.2e-114 417.5 264 76.1
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 2.4e-107 393.3 258 74.4
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 8.9e-94 348.2 291 65.6
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 5.2e-86 322.4 419 42.2
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 2.0e-85 320.5 194 80.9
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 3.6e-71 273.1 235 55.7
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 5.1e-57 226.1 185 63.8
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 1.8e-41 174.5 93 93.5
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 9.0e-38 162.2 139 61.2
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.6e-31 141.4 91 67.0
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 5.3e-30 136.3 90 70.0
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 5.1e-25 119.8 89 59.6
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 4.5e-13 80.1 353 22.7
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 3.2e-11 73.9 90 47.8
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 4.4e-08 63.5 41 68.3


User provided reference genes

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