Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.1e-289 999.2 505 100.0
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 2.9e-261 904.8 505 90.3
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 5.4e-255 884.0 505 87.5
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 5.9e-254 880.6 505 86.5
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 7.7e-254 880.2 505 87.9
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 4.7e-251 870.9 505 86.7
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 7.5e-249 863.6 508 86.0
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 9.8e-249 863.2 503 85.9
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 2.9e-245 851.7 506 86.4
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 6.1e-243 844.0 504 85.7
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 8.0e-243 843.6 504 85.7
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.8e-239 832.4 512 83.4
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 1.1e-236 823.2 503 83.5
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 2.3e-234 815.5 506 84.2
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 2.3e-234 815.5 506 84.2
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 2.0e-233 812.4 503 81.3
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.2e-230 803.1 528 79.2
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 3.5e-230 801.6 506 82.8
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 1.3e-192 676.8 502 68.5
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.2e-182 643.7 348 92.2
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 1.0e-152 544.3 279 95.0
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 2.5e-151 539.7 540 55.9
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 1.6e-150 537.0 562 53.2
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 8.8e-149 531.2 524 56.5
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.5e-148 530.4 546 54.2
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 1.3e-147 527.3 523 55.8
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 2.2e-147 526.6 529 55.4
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 2.8e-147 526.2 561 54.0
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 3.7e-147 525.8 521 56.6
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 1.1e-146 524.2 506 55.9
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 3.1e-146 522.7 509 55.0
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 4.1e-146 522.3 517 54.9
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.6e-145 520.4 507 55.8
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 2.0e-145 520.0 542 53.3
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 7.7e-145 518.1 552 53.8
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 7.7e-145 518.1 511 56.4
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 1.0e-144 517.7 539 53.2
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 1.0e-144 517.7 525 53.9
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 1.3e-144 517.3 506 55.7
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 1.7e-144 516.9 499 55.7
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 6.5e-144 515.0 545 52.8
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.1e-143 514.2 517 56.1
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.5e-143 513.8 554 52.3
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 5.5e-143 511.9 518 54.1
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.2e-143 511.5 521 54.3
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 3.6e-142 509.2 485 56.1
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 4.7e-142 508.8 512 54.9
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 4.7e-142 508.8 486 57.6
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 4.7e-142 508.8 527 53.7
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 8.0e-142 508.1 491 54.8
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.0e-141 507.7 483 56.7
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.8e-141 506.9 535 52.3
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 1.8e-141 506.9 548 51.3
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 4.0e-141 505.8 490 56.5
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 4.0e-141 505.8 495 55.2
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 4.0e-141 505.8 545 51.4
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 5.2e-141 505.4 543 50.8
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 8.8e-141 504.6 537 53.1
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 1.5e-140 503.8 499 54.9
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 2.6e-140 503.1 538 53.9
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 2.6e-140 503.1 494 56.5
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 5.7e-140 501.9 613 47.8
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 9.8e-140 501.1 539 51.6
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 3.7e-139 499.2 534 52.4
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 1.8e-138 496.9 505 53.7
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 3.1e-138 496.1 487 55.2
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 4.1e-138 495.7 524 52.1
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 9.1e-138 494.6 539 52.3
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 2.7e-137 493.0 505 53.1
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.3e-136 490.7 487 54.8
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 6.5e-136 488.4 543 51.0
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 7.2e-135 485.0 517 52.6
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 2.1e-134 483.4 601 49.3
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 8.0e-134 481.5 513 52.8
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 4.0e-133 479.2 487 53.8
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 1.4e-130 470.7 452 55.3
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 9.2e-130 468.0 567 48.3
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.6e-129 467.2 511 52.1
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 2.0e-129 466.8 527 48.6
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 1.3e-128 464.2 408 59.3
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 1.1e-127 461.1 494 51.2
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 3.3e-127 459.5 549 50.1
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 7.3e-127 458.4 399 60.7
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.0e-125 454.5 512 49.8
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 1.4e-125 454.1 463 54.2
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 3.0e-125 453.0 504 51.0
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 2.6e-124 449.9 525 49.9
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 3.2e-122 443.0 504 48.4
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.6e-121 440.7 453 53.6
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.2e-118 431.0 470 52.8
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.6e-118 430.6 527 47.8
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 4.7e-118 429.1 510 49.8
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 1.5e-116 424.1 471 52.7
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 4.9e-115 419.1 213 95.8
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 3.2e-114 416.4 499 48.1
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 5.6e-111 405.6 310 66.1
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 2.8e-110 403.3 379 58.0
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.6e-105 387.5 251 72.9
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 1.1e-103 381.3 551 41.4
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 2.2e-99 367.1 530 41.1
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 1.4e-98 364.4 524 41.8
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 2.1e-89 334.0 250 72.0
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 1.0e-88 331.6 432 46.3
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 4.5e-84 316.2 252 60.7
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 5.4e-82 309.3 379 49.3
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.1e-81 307.4 284 59.2
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 8.7e-80 302.0 229 65.5
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 3.4e-76 290.0 211 73.9
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 6.2e-70 269.2 447 36.7
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 1.0e-51 208.8 155 72.9
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 6.5e-51 206.1 244 42.6
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.1e-47 195.3 483 28.8
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 6.5e-43 179.5 179 55.3
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 1.4e-37 161.8 220 44.5
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.3e-35 155.2 162 51.2
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 1.4e-29 135.2 106 64.2
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.5e-26 125.2 251 35.9
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 1.5e-23 115.2 319 28.5
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 9.8e-23 112.5 183 37.2
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 2.5e-18 97.8 195 33.8
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.8e-17 94.4 125 41.6
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.5e-15 88.6 101 45.5
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 8.3e-14 82.8 168 35.7
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 1.8e-13 81.6 41 90.2
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 3.1e-13 80.9 139 36.0
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 5.4e-13 80.1 144 37.5
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 4.5e-12 77.0 65 55.4
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 5.9e-12 76.6 39 89.7
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 1.3e-11 75.5 134 37.3
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 2.3e-11 74.7 149 37.6
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.1e-09 66.6 111 36.9
Lj2A91G56 Lonicera japonica HOM05D005865 ORTHO05D006867 2.9e-06 57.8 36 72.2


User provided reference genes

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