Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g14850 Schrenkiella parvula HOM05D000912 ORTHO05D012941 4.3e-97 358.2 211 100.0
BcaC07g38808 Brassica carinata HOM05D000912 ORTHO05D012941 2.7e-19 99.8 152 44.7
BolC8t49375H Brassica oleracea HOM05D000054 ORTHO05D000286 1.0e-18 97.8 81 66.7
C08p44370 Brassica napus HOM05D000912 ORTHO05D012941 1.8e-15 87.0 153 37.9
C08p44360 Brassica napus HOM05D000912 ORTHO05D012941 2.6e-14 83.2 71 63.4
C08p17500 Brassica napus HOM05D000912 ORTHO05D001232 7.7e-14 81.6 81 60.5
BolC8t51979H Brassica oleracea HOM05D000912 ORTHO05D012941 7.7e-14 81.6 75 58.7
BcaC07g41461 Brassica carinata HOM05D000912 ORTHO05D012941 8.5e-13 78.2 71 59.2
A09p60780 Brassica napus HOM05D000912 ORTHO05D012941 1.1e-12 77.8 156 35.3
BraA09t41451Z Brassica rapa HOM05D000912 ORTHO05D012941 1.1e-12 77.8 156 35.3
BcaB03g13037 Brassica carinata HOM05D000912 ORTHO05D012941 1.3e-08 64.3 127 35.4
THA.LOC104808111 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 1.3e-08 64.3 128 35.2
AL1G28880 Arabidopsis lyrata HOM05D000912 ORTHO05D001232 3.7e-08 62.8 86 45.3
THA.LOC104812346 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 3.7e-08 62.8 101 39.6
AT1G16710 Arabidopsis thaliana HOM05D000912 ORTHO05D001232 6.3e-08 62.0 111 39.6
Sp1g14860 Schrenkiella parvula HOM05D000912 ORTHO05D001232 6.3e-08 62.0 86 45.3
THA.LOC104813621 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 6.3e-08 62.0 90 42.2
BolC8t49377H Brassica oleracea HOM05D000912 ORTHO05D001232 2.4e-07 60.1 86 44.2
Carub.0001s1645 Capsella rubella HOM05D000912 ORTHO05D001232 5.4e-07 58.9 67 52.2
CARHR017170 Cardamine hirsuta HOM05D000912 ORTHO05D001232 5.4e-07 58.9 86 44.2
BcaC07g41460 Brassica carinata HOM05D000912 ORTHO05D001232 7.0e-07 58.5 86 43.0
A08p31320 Brassica napus HOM05D000912 ORTHO05D001232 7.0e-07 58.5 86 43.0
A09p60770 Brassica napus HOM05D000912 ORTHO05D001232 7.0e-07 58.5 86 43.0
C08p44350 Brassica napus HOM05D000912 ORTHO05D001232 7.0e-07 58.5 86 43.0
BolC8t51978H Brassica oleracea HOM05D000912 ORTHO05D001232 7.0e-07 58.5 86 43.0
BraA08t35055Z Brassica rapa HOM05D000912 ORTHO05D001232 7.0e-07 58.5 86 43.0
BraA09t41450Z Brassica rapa HOM05D000912 ORTHO05D001232 7.0e-07 58.5 86 43.0
BcaC07g38809 Brassica carinata HOM05D000912 ORTHO05D001232 9.1e-07 58.2 105 41.0
Sp5g34050 Schrenkiella parvula HOM05D000912 ORTHO05D001232 1.6e-06 57.4 104 41.3
Thhalv10006544m.g Eutrema salsugineum HOM05D000912 ORTHO05D001232 4.5e-06 55.8 39 69.2
BcaB03g13036 Brassica carinata HOM05D000912 ORTHO05D001232 5.9e-06 55.5 86 41.9
Cpa.g.sc10.17 Carica papaya HOM05D000912 ORTHO05D001232 5.9e-06 55.5 102 36.3
BraA08t35056Z Brassica rapa HOM05D000054 ORTHO05D000286 7.7e-06 55.1 170 34.1


User provided reference genes

Program Settings