Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 9.2e-131 470.3 252 100.0
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 1.5e-101 373.2 227 86.3
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 2.7e-98 362.5 227 84.1
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 1.3e-97 360.1 253 79.8
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 6.7e-97 357.8 227 84.1
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 8.7e-97 357.5 227 81.9
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 1.5e-96 356.7 227 83.3
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 5.6e-96 354.8 227 78.0
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 2.1e-95 352.8 227 83.3
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 2.1e-95 352.8 227 83.3
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 3.7e-95 352.1 227 82.8
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 1.1e-94 350.5 227 82.8
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 1.1e-94 350.5 227 82.8
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 1.1e-94 350.5 227 76.7
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.1e-94 350.5 227 76.7
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 1.8e-94 349.7 208 87.5
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 2.4e-94 349.4 227 76.2
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 7.6e-93 344.4 225 81.3
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 4.9e-92 341.7 225 75.6
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 2.5e-91 339.3 227 77.1
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 3.2e-91 339.0 227 74.0
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 3.2e-91 339.0 227 74.0
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 5.5e-91 338.2 227 75.8
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 7.1e-91 337.8 227 74.4
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 7.1e-91 337.8 227 72.7
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 1.2e-90 337.0 227 74.9
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 2.1e-90 336.3 227 74.4
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 2.1e-90 336.3 227 75.3
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 3.5e-90 335.5 227 74.0
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 4.6e-90 335.1 227 75.3
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 4.6e-90 335.1 227 76.2
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 6.0e-90 334.7 227 73.6
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 6.0e-90 334.7 227 74.9
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 6.0e-90 334.7 227 72.2
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 1.3e-89 333.6 227 75.8
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 1.3e-89 333.6 227 74.0
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 2.3e-89 332.8 224 74.1
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 2.3e-89 332.8 227 74.9
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 3.9e-89 332.0 227 74.4
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 5.1e-89 331.6 227 74.0
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 8.7e-89 330.9 227 76.2
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 1.1e-88 330.5 235 73.6
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 1.9e-88 329.7 227 72.7
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 1.9e-88 329.7 226 73.5
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 1.9e-88 329.7 227 79.3
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 1.9e-88 329.7 225 72.9
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 3.3e-88 328.9 227 72.2
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 5.6e-88 328.2 225 75.1
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 5.6e-88 328.2 225 75.1
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 7.4e-88 327.8 227 74.0
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 7.4e-88 327.8 218 74.8
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 1.3e-87 327.0 225 71.6
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 2.8e-87 325.9 224 72.8
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.8e-86 323.2 221 73.3
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 1.8e-86 323.2 227 72.7
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.8e-86 323.2 227 72.2
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 1.8e-86 323.2 227 72.2
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 2.4e-86 322.8 227 72.7
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 3.1e-86 322.4 224 72.8
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 5.3e-86 321.6 224 72.3
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 5.3e-86 321.6 227 70.9
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 6.9e-86 321.2 237 67.9
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 1.2e-85 320.5 239 70.3
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 2.0e-85 319.7 225 71.1
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 3.4e-85 318.9 228 71.5
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 7.6e-85 317.8 227 70.5
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 7.6e-85 317.8 260 65.0
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.3e-84 317.0 242 69.0
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.7e-84 316.6 224 72.3
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 4.9e-84 315.1 227 69.2
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 1.1e-83 313.9 267 62.5
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 1.9e-83 313.2 227 70.0
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 3.2e-83 312.4 227 70.9
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 1.6e-82 310.1 227 69.6
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 2.1e-82 309.7 224 71.4
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 1.3e-79 300.4 208 73.6
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 2.8e-79 299.3 225 68.9
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 3.7e-79 298.9 250 61.2
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 1.8e-78 296.6 225 64.9
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 1.8e-78 296.6 227 67.4
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 2.4e-78 296.2 227 67.8
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 4.1e-78 295.4 221 68.3
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 4.1e-78 295.4 207 72.9
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 6.9e-78 294.7 232 66.8
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.7e-76 290.0 224 64.7
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 1.1e-75 287.3 224 64.7
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 1.4e-75 287.0 194 73.2
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 4.2e-75 285.4 203 69.5
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 1.6e-74 283.5 227 66.5
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 4.6e-74 282.0 224 63.8
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 6.1e-74 281.6 227 66.1
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 6.1e-74 281.6 227 62.1
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 6.7e-73 278.1 241 63.1
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 1.8e-70 270.0 195 71.8
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 1.9e-67 260.0 214 60.7
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 9.4e-67 257.7 222 60.4
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 3.6e-66 255.8 220 59.1
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 6.1e-66 255.0 193 66.8
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 7.9e-66 254.6 207 60.9
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 8.8e-65 251.1 222 59.9
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 8.8e-65 251.1 222 59.9
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 2.8e-63 246.1 222 59.0
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 2.9e-60 236.1 223 54.3
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 2.7e-58 229.6 221 53.4
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 2.8e-55 219.5 207 54.1
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 3.2e-51 206.1 213 51.6
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 1.2e-48 197.6 139 69.1
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 3.7e-47 192.6 184 58.2
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 5.7e-40 168.7 199 45.7
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 2.4e-38 163.3 190 51.1
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 1.6e-29 134.0 94 66.0
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 5.9e-29 132.1 163 50.3
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.5e-27 127.5 98 69.4
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 2.2e-15 87.0 194 30.9
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 4.1e-14 82.8 220 28.6
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 1.6e-10 70.9 219 26.9
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 6.8e-09 65.5 107 45.8
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 8.9e-09 65.1 35 91.4
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 1.5e-08 64.3 95 46.3


User provided reference genes

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