Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 3.6e-227 791.2 385 100.0
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 1.6e-171 606.3 393 77.6
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 1.2e-161 573.5 385 74.8
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 3.4e-161 572.0 397 73.3
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 3.4e-161 572.0 397 73.3
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 7.6e-161 570.9 397 73.3
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 7.6e-161 570.9 397 73.3
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 3.2e-159 565.5 400 73.8
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 4.6e-158 561.6 393 74.0
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 1.1e-156 557.0 384 73.4
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 2.6e-153 545.8 400 71.2
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 2.2e-152 542.7 402 71.9
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 4.8e-147 525.0 395 68.6
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 5.2e-133 478.4 401 61.8
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 2.7e-121 439.5 278 79.9
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 2.9e-120 436.0 278 79.5
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 2.9e-120 436.0 278 79.5
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 5.5e-119 431.8 401 56.1
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 1.2e-118 430.6 279 78.9
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 1.6e-118 430.3 279 78.1
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 2.7e-113 412.9 407 54.5
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 3.5e-113 412.5 410 54.6
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 5.9e-113 411.8 418 53.6
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.3e-112 410.6 407 54.5
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 1.3e-112 410.6 412 53.4
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.3e-112 409.8 407 54.3
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 5.0e-112 408.7 402 54.5
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 8.6e-112 407.9 407 54.3
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.3e-111 405.6 380 54.5
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 2.1e-110 403.3 405 54.3
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 1.0e-109 401.0 405 52.3
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 2.6e-108 396.4 372 55.9
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 3.4e-108 396.0 402 53.5
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 2.2e-107 393.3 412 52.4
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 2.9e-107 392.9 407 52.8
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 4.9e-107 392.1 413 53.0
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 1.1e-106 391.0 403 51.4
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 1.4e-106 390.6 415 52.3
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 5.4e-106 388.7 414 51.0
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 5.9e-105 385.2 414 50.7
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 1.0e-104 384.4 400 52.5
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 1.7e-104 383.6 423 49.2
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 3.0e-104 382.9 420 51.0
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 3.0e-104 382.9 399 52.4
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 2.5e-103 379.8 425 48.5
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 2.5e-103 379.8 425 48.7
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 3.3e-103 379.4 398 51.3
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 5.6e-103 378.6 398 51.3
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 1.2e-102 377.5 398 51.3
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 3.6e-102 375.9 360 56.1
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 4.7e-102 375.6 452 47.6
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 1.4e-101 374.0 403 49.6
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 1.4e-101 374.0 403 48.6
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 1.5e-100 370.5 452 47.1
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 4.4e-100 369.0 426 50.2
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 5.8e-100 368.6 407 49.1
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 9.8e-100 367.9 397 51.4
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 1.7e-99 367.1 404 49.0
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 3.7e-99 365.9 396 49.7
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 6.4e-99 365.2 474 44.9
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 3.2e-98 362.8 380 52.6
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 5.4e-98 362.1 403 47.9
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 9.2e-98 361.3 408 48.5
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 1.2e-97 360.9 429 48.5
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 3.5e-97 359.4 398 50.0
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 3.5e-97 359.4 383 52.0
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 1.3e-96 357.5 418 46.7
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.3e-96 356.7 287 61.7
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 5.0e-96 355.5 377 50.7
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 6.6e-96 355.1 405 47.9
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 8.6e-96 354.8 362 50.3
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 1.1e-95 354.4 399 49.1
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 2.5e-95 353.2 358 52.5
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 2.5e-95 353.2 397 47.9
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 3.3e-95 352.8 403 50.1
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 7.3e-95 351.7 271 63.8
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 1.2e-94 350.9 290 59.7
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 1.6e-94 350.5 385 50.9
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 6.2e-94 348.6 411 47.9
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 1.1e-93 347.8 405 49.1
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 1.4e-93 347.4 281 61.2
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 1.8e-93 347.1 368 51.1
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 3.1e-93 346.3 417 46.8
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 8.9e-93 344.7 485 43.7
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 1.2e-92 344.4 406 48.8
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 5.8e-92 342.0 338 54.4
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 1.3e-91 340.9 426 45.8
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 1.7e-91 340.5 362 49.7
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 1.1e-90 337.8 413 45.5
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 1.4e-90 337.4 404 48.0
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 2.7e-89 333.2 352 51.4
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 4.6e-89 332.4 296 56.4
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 7.8e-89 331.6 347 50.4
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 5.1e-88 328.9 379 47.5
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 6.6e-88 328.6 249 63.1
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 1.5e-87 327.4 392 45.4
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 4.3e-87 325.9 389 46.8
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 2.1e-86 323.6 401 46.9
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 1.4e-85 320.9 401 46.1
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 2.4e-85 320.1 387 45.2
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 3.1e-85 319.7 434 42.9
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 5.2e-85 318.9 299 54.2
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 3.8e-83 312.8 420 43.8
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 8.4e-83 311.6 412 43.4
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 2.7e-81 306.6 440 42.5
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 3.5e-81 306.2 319 51.1
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 1.3e-80 304.3 426 43.7
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 2.3e-80 303.5 386 44.6
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 1.2e-76 291.2 404 42.1
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 7.6e-76 288.5 381 44.4
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 5.1e-72 275.8 349 44.4
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 2.2e-67 260.4 265 50.2
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 1.4e-66 257.7 290 48.3
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 7.9e-65 251.9 292 47.9
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 3.7e-62 243.0 317 42.9
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 1.2e-60 238.0 299 47.5
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 2.6e-60 236.9 287 46.3
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 1.3e-59 234.6 290 46.2
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 4.3e-55 219.5 167 61.1
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 7.4e-55 218.8 320 42.8
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 3.4e-52 209.9 288 42.7
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 2.9e-51 206.8 188 56.4
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 6.5e-51 205.7 286 40.9
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 7.4e-47 192.2 321 39.6
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 1.2e-44 184.9 290 39.0
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 3.4e-44 183.3 108 81.5
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 2.2e-43 180.6 134 62.7
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 3.8e-43 179.9 131 64.9
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 1.4e-42 177.9 233 46.4
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 3.2e-42 176.8 280 41.8
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 5.5e-42 176.0 242 41.3
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 7.9e-41 172.2 244 39.8
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.9e-40 169.9 127 64.6
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 1.9e-39 167.5 257 38.1
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 1.0e-35 155.2 178 52.8
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 1.4e-32 144.8 186 44.6
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 1.8e-32 144.4 72 87.5
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 3.0e-32 143.7 108 61.1
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 9.7e-31 138.7 186 43.5
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 4.5e-28 129.8 80 75.0
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.2e-26 123.6 102 60.8
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 3.7e-22 110.2 83 62.7
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 7.0e-21 105.9 63 71.4
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 9.1e-21 105.5 79 57.0
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 5.9e-20 102.8 266 28.6
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 2.9e-19 100.5 67 68.7
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 3.2e-18 97.1 191 35.6
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 3.6e-17 93.6 169 36.1
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 8.0e-17 92.4 221 34.8
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 2.3e-16 90.9 74 56.8
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 6.3e-14 82.8 49 67.3
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 9.1e-13 79.0 96 45.8
GSVIVG01027714001 Vitis vinifera HOM05D004413 ORTHO05D005199 9.1e-13 79.0 166 36.7
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.2e-12 78.6 53 67.9
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.7e-12 77.4 53 66.0
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 4.5e-12 76.6 104 41.3
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 4.2e-10 70.1 79 45.6
GSVIVG01037069001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.7e-09 67.4 49 65.3
Nitab4.5_0003792g0060 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.5e-07 61.6 70 45.7


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