Gene: AT1G04945

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G04945
  • Transcript Identifier AT1G04945.3
  • Gene Type Coding gene
  • Location Chr1 : 1399588-1402651 : positive

Gene Family Information

  • ID HOM05D004413
  • #Genes/#Species 162/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G04945.3
  • uniprot F4I765

Descriptions

  • Description HIT-type Zinc finger family protein
  • Computational description HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, HIT-type (InterPro:IPR007529); Has 408 Blast hits to 406 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 151; Plants - 52; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).
  • Computational description HIT-type Zinc finger family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein ycf60 (InterPro:IPR019109), Zinc finger, HIT-type (InterPro:IPR007529); BEST Arabidopsis thaliana protein match is: translocon at the inner envelope membrane of chloroplasts 20 (TAIR:AT1G04940.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009706
IEA
GOA Databasechloroplast inner membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0009528
IEA
GOA Databaseplastid inner membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005691 Chloroplast protein import component Tic20
IPR007529 Zinc finger, HIT-type
Mapman id Description
23.1.3.1.1 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.component Tic20-I/IV