Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 3.5e-280 967.6 481 100.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.1e-265 919.5 463 97.8
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 2.1e-261 905.2 464 96.6
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 6.2e-261 903.7 463 96.3
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 6.9e-260 900.2 465 96.1
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 3.4e-259 897.9 466 95.7
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 3.8e-258 894.4 483 92.1
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 6.4e-258 893.6 463 95.0
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.4e-257 890.6 440 99.3
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.1e-256 888.6 464 94.6
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 1.5e-251 872.5 465 93.1
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 8.2e-245 850.1 463 89.4
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 6.7e-231 803.9 463 83.4
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 5.3e-228 794.3 455 84.0
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 9.1e-228 793.5 453 83.7
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.2e-227 793.1 464 81.9
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 5.9e-227 790.8 456 83.3
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.0e-226 790.0 456 84.6
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.7e-226 789.3 451 82.5
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 3.8e-226 788.1 441 83.9
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.1e-225 786.6 455 83.3
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 2.5e-225 785.4 464 81.7
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 3.2e-225 785.0 458 81.9
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.2e-224 783.1 462 81.8
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.6e-224 782.7 433 84.8
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.7e-224 781.9 454 83.5
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 3.6e-224 781.6 445 82.7
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 3.6e-224 781.6 463 81.0
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 3.6e-224 781.6 456 81.6
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 7.9e-224 780.4 463 81.9
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.0e-223 780.0 460 82.4
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.4e-223 779.6 429 85.8
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.8e-223 779.2 444 82.9
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.8e-223 779.2 463 81.6
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.3e-223 778.9 465 81.5
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.0e-223 778.5 455 82.2
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.9e-223 778.1 466 81.3
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 3.9e-223 778.1 448 82.8
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 8.8e-223 776.9 455 81.3
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.5e-222 776.2 453 81.9
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 1.5e-222 776.2 455 81.1
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 2.6e-222 775.4 460 80.0
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 4.4e-222 774.6 458 81.0
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 5.7e-222 774.2 447 81.4
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 5.7e-222 774.2 466 80.9
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 5.7e-222 774.2 456 80.9
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.3e-221 773.1 455 82.0
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.3e-221 773.1 440 83.6
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 4.8e-221 771.2 430 84.4
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 6.3e-221 770.8 462 81.2
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.4e-220 769.6 464 79.7
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 3.1e-220 768.5 458 80.6
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.0e-220 767.3 428 85.3
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 7.0e-220 767.3 454 80.8
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 9.1e-220 766.9 426 84.5
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 3.5e-219 765.0 463 79.5
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 5.9e-219 764.2 490 76.7
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 7.7e-219 763.8 430 83.7
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.3e-218 763.1 459 80.8
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.7e-218 762.7 451 80.7
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 8.5e-218 760.4 477 77.1
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.9e-217 759.2 424 84.4
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 4.2e-217 758.1 456 80.7
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 7.2e-217 757.3 449 80.4
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 7.2e-217 757.3 427 83.1
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 7.2e-217 757.3 429 83.2
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 9.4e-217 756.9 481 77.3
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 9.7e-214 746.9 421 82.2
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 4.8e-213 744.6 458 78.4
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 8.2e-213 743.8 415 83.4
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 4.1e-212 741.5 471 76.4
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 7.0e-212 740.7 452 78.5
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.5e-209 732.3 463 75.4
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 3.2e-209 731.9 451 78.3
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 9.4e-209 730.3 423 80.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.2e-206 723.4 460 75.2
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 2.6e-206 722.2 447 78.1
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 2.8e-205 718.8 433 78.5
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 2.8e-205 718.8 401 84.0
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 4.8e-205 718.0 401 84.5
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 4.5e-203 711.4 418 79.9
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 5.9e-203 711.1 387 90.2
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 5.0e-202 708.0 478 74.5
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.1e-201 706.8 425 79.1
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.9e-201 706.1 426 76.8
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.3e-199 699.1 456 73.0
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 3.0e-199 698.7 517 68.7
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.3e-194 682.6 444 74.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.3e-194 682.6 451 73.6
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.5e-193 679.9 382 84.3
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 6.8e-191 671.0 402 81.3
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.2e-190 670.2 493 68.6
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 5.9e-187 657.9 392 80.1
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.5e-185 653.3 562 61.2
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 2.5e-185 652.5 458 69.4
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 3.5e-179 632.1 421 70.3
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 6.6e-178 627.9 357 82.9
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.3e-173 613.6 417 71.7
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.2e-166 590.5 441 63.5
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.7e-163 579.3 426 64.8
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 7.8e-163 577.8 377 75.9
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 6.6e-154 548.1 511 59.3
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 3.3e-137 492.7 303 78.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 9.6e-137 491.1 271 85.6
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.3e-136 490.7 374 62.0
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 3.4e-134 482.6 285 80.7
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 7.6e-134 481.5 463 55.7
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 7.9e-115 418.3 243 81.9
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 8.0e-67 258.8 147 81.6
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 3.9e-61 240.0 190 64.2
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.6e-59 234.6 147 74.1
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.0e-37 162.2 102 70.6
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.9e-28 131.3 79 75.9
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 3.2e-23 114.0 84 65.5
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 8.1e-19 99.4 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 6.5e-16 89.7 49 87.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.7e-12 76.6 49 71.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.7e-12 76.6 42 81.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.8e-11 73.6 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 5.5e-07 60.1 40 70.0


User provided reference genes

Program Settings