Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 7.5e-147 523.9 268 100.0
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 4.0e-132 474.9 268 89.2
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 2.0e-123 446.0 269 85.9
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 2.9e-122 442.2 270 85.2
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 3.2e-121 438.7 255 86.3
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 2.0e-120 436.0 256 85.9
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 6.6e-119 431.0 253 86.2
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 8.3e-114 414.1 281 77.2
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 1.2e-107 393.7 268 73.1
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 1.9e-105 386.3 258 78.7
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 4.9e-98 361.7 218 84.4
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 7.9e-80 301.2 276 56.5
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 6.7e-79 298.1 281 56.2
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 2.1e-77 293.1 267 57.3
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 4.8e-77 292.0 278 54.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 1.2e-75 287.3 272 56.2
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 1.5e-75 287.0 183 80.9
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.0e-75 286.6 268 56.3
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 3.4e-75 285.8 279 50.9
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 3.4e-75 285.8 275 53.8
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 5.8e-75 285.0 278 54.7
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 7.1e-73 278.1 278 52.9
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 6.7e-71 271.6 277 50.2
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 9.6e-70 267.7 266 53.8
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 1.3e-69 267.3 263 53.2
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 1.1e-68 264.2 276 49.6
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 2.4e-68 263.1 278 50.4
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 3.1e-68 262.7 275 50.5
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 4.0e-68 262.3 278 50.7
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 4.0e-68 262.3 267 52.1
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 5.3e-68 261.9 261 52.1
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 6.9e-68 261.5 267 51.7
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.5e-67 260.4 275 52.7
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 4.5e-67 258.8 276 48.9
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 5.8e-67 258.5 269 53.9
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 7.6e-67 258.1 263 51.0
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.0e-66 257.7 276 53.3
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 2.2e-66 256.5 252 54.0
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 8.4e-66 254.6 238 54.6
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 1.1e-65 254.2 265 50.2
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 4.2e-65 252.3 261 50.6
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 4.2e-65 252.3 268 51.9
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 7.1e-65 251.5 264 50.8
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 9.3e-65 251.1 268 49.3
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 1.6e-64 250.4 277 50.9
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 2.1e-64 250.0 267 51.3
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 2.1e-64 250.0 262 53.8
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 7.9e-64 248.1 254 51.2
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.3e-63 247.3 263 49.8
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.8e-63 246.9 303 45.5
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 2.3e-63 246.5 260 53.8
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.9e-63 245.7 273 48.0
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.1e-62 244.2 263 49.0
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 3.3e-62 242.7 256 51.2
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 9.7e-62 241.1 280 48.2
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 4.8e-61 238.8 267 49.1
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 8.2e-61 238.0 257 49.8
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 1.2e-59 234.2 257 46.7
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 3.4e-59 232.6 228 54.4
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 5.9e-59 231.9 267 46.8
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 1.3e-58 230.7 265 49.8
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 2.2e-58 229.9 235 53.2
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 2.9e-58 229.6 277 48.4
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 5.0e-58 228.8 243 52.7
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 5.0e-58 228.8 231 54.5
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 5.0e-58 228.8 277 48.0
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.1e-57 227.6 267 46.1
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 1.1e-57 227.6 248 47.6
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 1.1e-57 227.6 277 48.0
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 1.4e-57 227.3 271 45.4
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 1.4e-57 227.3 252 48.0
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 2.5e-57 226.5 267 46.1
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 5.5e-57 225.3 260 46.5
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 2.7e-56 223.0 268 42.9
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 4.6e-56 222.2 223 54.7
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 3.9e-55 219.2 190 58.4
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 3.9e-55 219.2 203 56.2
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.3e-54 216.1 282 42.2
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 6.9e-52 208.4 214 55.1
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.0e-50 204.5 256 46.5
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 3.8e-50 202.6 264 43.6
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 5.0e-50 202.2 213 50.7
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 8.5e-50 201.4 221 45.7
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.0e-47 194.5 265 41.9
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.0e-46 190.3 229 43.2
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 4.8e-45 185.7 221 50.2
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 4.8e-45 185.7 229 42.8
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 1.8e-44 183.7 236 43.2
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.8e-44 183.7 231 48.1
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 3.5e-43 179.5 263 39.9
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 1.9e-41 173.7 256 38.7
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.9e-39 166.0 170 51.8
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 9.7e-38 161.4 183 49.2
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.3e-37 161.0 171 51.5
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 3.1e-28 129.8 140 51.4
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 1.3e-18 97.8 114 49.1
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 3.4e-14 83.2 257 30.4
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 2.8e-13 80.1 85 52.9
MCO04G533 Micromonas commoda HOM05D007546 ORTHO05D009542 2.3e-10 70.5 238 23.5
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 9.5e-09 65.1 60 53.3
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 2.1e-08 63.9 60 53.3


User provided reference genes

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