Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen12g021190 Solanum pennellii HOM05D002261 ORTHO05D002334 8.9e-99 363.6 184 100.0
PGSC0003DMG400001258 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.6e-39 165.2 196 49.5
PGSC0003DMG400023096 Solanum tuberosum HOM05D002261 ORTHO05D002334 4.5e-34 148.7 158 50.0
Sopen04g013910 Solanum pennellii HOM05D002261 ORTHO05D002334 6.5e-33 144.8 160 48.1
PGSC0003DMG400029822 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.8e-30 136.7 160 46.2
Solyc02g038640.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.3e-30 136.3 152 49.3
Sopen03g007880 Solanum pennellii HOM05D000002 ORTHO05D000001 3.9e-30 135.6 156 45.5
PGSC0003DMG400020377 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.7e-30 134.8 160 47.5
PGSC0003DMG401021841 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.9e-29 133.3 160 46.2
CAN.G15.23 Capsicum annuum HOM05D002261 ORTHO05D002334 1.9e-24 116.7 139 48.2
CAN.G933.9 Capsicum annuum HOM05D002261 ORTHO05D002334 3.6e-23 112.5 142 45.1
Sopen11g020370 Solanum pennellii HOM05D002261 ORTHO05D002334 8.2e-20 101.3 125 46.4
Sopen03g007870 Solanum pennellii HOM05D002261 ORTHO05D002334 2.4e-19 99.8 129 43.4
PGSC0003DMG400009893 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.4e-19 99.8 126 47.6
Sopen09g021920 Solanum pennellii HOM05D002261 ORTHO05D002334 6.9e-19 98.2 114 43.9
PGSC0003DMG400022355 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.9e-16 90.1 126 44.4
Nitab4.5_0001372g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.2e-16 88.2 127 41.7
Solyc12g042110.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 9.4e-16 87.8 56 76.8
Nitab4.5_0002374g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.6e-15 87.0 147 34.7
Nitab4.5_0003524g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.1e-15 85.1 78 55.1
Peaxi162Scf00558g00118 Petunia axillaris HOM05D002261 ORTHO05D002334 7.9e-15 84.7 125 40.0
Solyc07g014750.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 2.3e-14 83.2 114 43.9
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 3.0e-14 82.8 156 34.6
Nitab4.5_0003285g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 3.9e-14 82.4 168 32.7
Peaxi162Scf00131g00001 Petunia axillaris HOM05D002261 ORTHO05D002334 3.9e-14 82.4 156 34.6
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 5.1e-14 82.0 162 34.0
Solyc11g013730.3 Solanum lycopersicum HOM05D002261 ORTHO05D002334 6.7e-14 81.6 162 37.0
Nitab4.5_0005791g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.8e-14 81.3 103 44.7
Solyc09g055990.2 Solanum lycopersicum HOM05D000049 ORTHO05D002334 1.1e-13 80.9 126 38.1
Sopen03g011240 Solanum pennellii HOM05D002538 ORTHO05D002334 2.0e-13 80.1 109 44.0
CAN.G352.57 Capsicum annuum HOM05D002261 ORTHO05D002334 4.4e-13 79.0 54 61.1
PGSC0003DMG400029865 Solanum tuberosum HOM05D002261 ORTHO05D002334 9.7e-13 77.8 67 55.2
Nitab4.5_0000105g0350 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-12 77.0 156 33.3
Nitab4.5_0006835g0020 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.2e-12 76.6 156 32.7
Sopen09g026580 Solanum pennellii HOM05D002538 ORTHO05D003162 3.7e-12 75.9 92 45.7
PGSC0003DMG400033169 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.7e-12 75.9 56 60.7
Nitab4.5_0014440g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.3e-12 75.1 66 59.1
PGSC0003DMG400001679 Solanum tuberosum HOM05D002261 ORTHO05D002334 8.2e-12 74.7 67 56.7
CAN.G352.58 Capsicum annuum HOM05D002261 ORTHO05D002334 1.4e-11 73.9 54 61.1
CAN.G165.12 Capsicum annuum HOM05D002261 ORTHO05D002334 1.8e-11 73.6 152 34.2
CAN.G765.17 Capsicum annuum HOM05D002261 ORTHO05D002334 3.1e-11 72.8 159 33.3
Solyc03g150112.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 5.3e-11 72.0 105 40.0
PGSC0003DMG402010367 Solanum tuberosum HOM05D002261 ORTHO05D002334 7.0e-11 71.6 48 66.7
CAN.G784.3 Capsicum annuum HOM05D002261 ORTHO05D002334 9.1e-11 71.2 83 51.8
Mapoly0109s0044 Marchantia polymorpha HOM05D000824 ORTHO05D003555 4.5e-10 68.9 159 32.7
Solyc05g017795.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 4.5e-10 68.9 67 50.7
Solyc01g066616.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 1.3e-09 67.4 48 62.5
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.7e-09 67.0 95 40.0
PGSC0003DMG400020694 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.2e-09 66.6 67 52.2
Peaxi162Scf00677g10012 Petunia axillaris HOM05D002261 ORTHO05D002334 5.0e-09 65.5 157 31.8
Solyc05g017797.1 Solanum lycopersicum HOM05D002261 ORTHO05D002334 5.0e-09 65.5 48 62.5
Peaxi162Scf00363g00012 Petunia axillaris HOM05D002261 ORTHO05D002334 6.5e-09 65.1 157 31.8
Nitab4.5_0011225g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.2e-08 62.4 127 29.9
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 4.2e-08 62.4 147 33.3
Peaxi162Scf00164g00088 Petunia axillaris HOM05D002261 ORTHO05D002334 5.5e-08 62.0 105 37.1
Peaxi162Scf00020g01022 Petunia axillaris HOM05D002261 ORTHO05D002334 9.4e-08 61.2 157 31.2
Nitab4.5_0000877g0030 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-07 60.8 149 33.6
Pp3c1_20770 Physcomitrium patens HOM05D000824 ORTHO05D003555 1.6e-07 60.5 130 30.8
PGSC0003DMG401024222 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.6e-07 60.5 55 54.5
PGSC0003DMG400044414 Solanum tuberosum HOM05D002261 ORTHO05D002334 2.1e-07 60.1 72 48.6
Peaxi162Scf00565g00829 Petunia axillaris HOM05D002261 ORTHO05D002334 3.6e-07 59.3 147 31.3
Nitab4.5_0000230g0260 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.1e-07 58.5 147 32.0
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 6.1e-07 58.5 57 47.4
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.0e-06 57.8 78 38.5
Peaxi162Scf00102g00014 Petunia axillaris HOM05D056814 ORTHO05D002334 1.0e-06 57.8 67 41.8
Peaxi162Scf00809g00418 Petunia axillaris HOM05D002261 ORTHO05D002334 1.4e-06 57.4 125 33.6
PGSC0003DMG400021840 Solanum tuberosum HOM05D002261 ORTHO05D002334 1.8e-06 57.0 98 36.7
Duzib084G0695 Durio zibethinus HOM05D000824 ORTHO05D003555 2.3e-06 56.6 138 30.4
Sopen03g014500 Solanum pennellii HOM05D036688 ORTHO05D037762 2.3e-06 56.6 40 75.0
HPP92_014050 Vanilla planifolia HOM05D000824 ORTHO05D003555 2.3e-06 56.6 138 29.7
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.7e-06 55.1 70 42.9
PGSC0003DMG400021867 Solanum tuberosum HOM05D002261 ORTHO05D002334 6.7e-06 55.1 156 28.2
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 8.8e-06 54.7 129 26.4
Peaxi162Scf00175g00342 Petunia axillaris HOM05D002261 ORTHO05D002334 8.8e-06 54.7 122 30.3


User provided reference genes

Program Settings