Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g028110 Solanum pennellii HOM05D004188 ORTHO05D004445 2.2e-83 312.8 173 100.0
Solyc11g069390.1 Solanum lycopersicum HOM05D004188 ORTHO05D004445 7.4e-63 244.6 176 79.5
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 2.8e-38 162.9 190 60.5
Nitab4.5_0012712g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 8.5e-35 151.4 166 60.8
Nitab4.5_0000650g0240 Nicotiana tabacum HOM05D004188 ORTHO05D004445 1.1e-31 141.0 168 57.7
Solyc06g016790.3 Solanum lycopersicum HOM05D004188 ORTHO05D004445 3.2e-26 122.9 164 49.4
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 3.0e-24 116.3 149 59.7
CAN.G920.1 Capsicum annuum HOM05D004188 ORTHO05D004445 1.7e-22 110.5 168 49.4
PGSC0003DMG400029164 Solanum tuberosum HOM05D004188 ORTHO05D004445 1.6e-20 104.0 164 46.3
Nitab4.5_0011114g0020 Nicotiana tabacum HOM05D004188 ORTHO05D004445 5.9e-20 102.1 166 45.2
Sopen06g005740 Solanum pennellii HOM05D004188 ORTHO05D004445 1.5e-18 97.4 164 47.0
Dinv32748 Davidia involucrata HOM05D004188 ORTHO05D004445 3.6e-17 92.8 169 43.2
Peaxi162Scf00092g00152 Petunia axillaris HOM05D004188 ORTHO05D004445 5.4e-13 79.0 165 43.0
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 1.6e-12 77.4 161 44.1
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.0e-12 77.0 161 44.1
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.0e-12 77.0 161 44.1
BcaB01g01101 Brassica carinata HOM05D004188 ORTHO05D004445 4.5e-12 75.9 150 42.7
A06p21540 Brassica napus HOM05D004188 ORTHO05D004445 7.7e-12 75.1 144 45.1
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 7.7e-12 75.1 157 42.7
BraA06t25239Z Brassica rapa HOM05D004188 ORTHO05D004445 2.2e-11 73.6 144 44.4
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 2.2e-11 73.6 169 34.3
CARHR150740 Cardamine hirsuta HOM05D004188 ORTHO05D004445 1.9e-10 70.5 63 57.1
Migut.D02222 Erythranthe guttata HOM05D004188 ORTHO05D004445 1.9e-10 70.5 57 64.9
Migut.D02278 Erythranthe guttata HOM05D004188 ORTHO05D004445 1.9e-10 70.5 57 64.9
Lsat_1_v5_gn_1_65340 Lactuca sativa HOM05D004188 ORTHO05D004445 1.9e-10 70.5 165 38.2
Rhsim01G0217100 Rhododendron simsii HOM05D004188 ORTHO05D004445 1.9e-10 70.5 162 38.9
MSTRG.21125 Avicennia marina HOM05D004188 ORTHO05D004445 3.2e-10 69.7 42 78.6
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 3.2e-10 69.7 144 43.1
Peaxi162Scf00270g00089 Petunia axillaris HOM05D004188 ORTHO05D004445 4.2e-10 69.3 169 40.8
Rhsim01G0217000 Rhododendron simsii HOM05D004188 ORTHO05D004445 4.2e-10 69.3 162 38.3
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 5.5e-10 68.9 63 55.6
ClCG02G021140 Citrullus lanatus HOM05D004188 ORTHO05D004445 9.4e-10 68.2 42 73.8
Sed0015663 Sechium edule HOM05D004188 ORTHO05D004445 1.2e-09 67.8 43 69.8
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla HOM05D004188 ORTHO05D004445 1.6e-09 67.4 42 69.0
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 1.6e-09 67.4 167 40.1
Psat7g224760 Pisum sativum HOM05D004188 ORTHO05D004445 2.7e-09 66.6 59 57.6
ECA248G2476 Erigeron canadensis HOM05D004188 ORTHO05D004445 3.6e-09 66.2 108 39.8
Lsat_1_v5_gn_6_46020 Lactuca sativa HOM05D004188 ORTHO05D004445 3.6e-09 66.2 170 35.3
CiPaw.13G112700 Carya illinoinensis HOM05D004188 ORTHO05D004445 4.7e-09 65.9 165 35.8
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 4.7e-09 65.9 63 52.4
TAR629G0463 Trochodendron aralioides HOM05D004188 ORTHO05D004445 4.7e-09 65.9 184 32.6
MELO3C025771.2 Cucumis melo HOM05D004188 ORTHO05D004445 6.1e-09 65.5 69 50.7
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 6.1e-09 65.5 157 38.2
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 6.1e-09 65.5 76 46.1
BcaC01g01980 Brassica carinata HOM05D004188 ORTHO05D004445 2.3e-08 63.5 145 40.7
C03p69850 Brassica napus HOM05D004188 ORTHO05D004445 2.3e-08 63.5 145 40.7
BolC3t19246H Brassica oleracea HOM05D004188 ORTHO05D004445 2.3e-08 63.5 145 40.7
DCAR_006061 Daucus carota HOM05D004188 ORTHO05D004445 2.3e-08 63.5 58 55.2
Medtr4g059520 Medicago truncatula HOM05D004188 ORTHO05D004445 2.3e-08 63.5 56 58.9
Medtr4g459420 Medicago truncatula HOM05D004188 ORTHO05D004445 2.3e-08 63.5 56 58.9
Actinidia03061 Actinidia chinensis HOM05D004188 ORTHO05D004445 3.0e-08 63.2 41 73.2
Carub.0005s1101 Capsella rubella HOM05D004188 ORTHO05D004445 4.0e-08 62.8 63 55.6
Oeu030181.1 Olea europaea HOM05D004188 ORTHO05D004445 5.2e-08 62.4 172 32.0
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea HOM05D004188 ORTHO05D004445 6.8e-08 62.0 49 59.2
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea HOM05D004188 ORTHO05D004445 6.8e-08 62.0 49 59.2
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea HOM05D004188 ORTHO05D004445 8.8e-08 61.6 67 50.7
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea HOM05D004188 ORTHO05D004445 8.8e-08 61.6 67 50.7
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 8.8e-08 61.6 161 37.9
ECA233G4889 Erigeron canadensis HOM05D004188 ORTHO05D004445 1.2e-07 61.2 75 50.7
EL10Ac9g22513 Beta vulgaris HOM05D004188 ORTHO05D004445 1.5e-07 60.8 166 36.1
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.5e-07 60.8 58 55.2
AL5G23790 Arabidopsis lyrata HOM05D004188 ORTHO05D004445 2.0e-07 60.5 156 38.5
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 2.0e-07 60.5 45 64.4
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 2.6e-07 60.1 48 62.5
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 3.4e-07 59.7 45 62.2
Actinidia24099 Actinidia chinensis HOM05D004188 ORTHO05D004445 4.4e-07 59.3 166 33.7
Oeu002868.1 Olea europaea HOM05D004188 ORTHO05D004445 4.4e-07 59.3 165 30.9
unitig_699.g19195 Utricularia gibba HOM05D004188 ORTHO05D004445 4.4e-07 59.3 38 71.1
AT3G45230 Arabidopsis thaliana HOM05D004188 ORTHO05D004445 5.7e-07 58.9 173 37.6
Thhalv10002916m.g Eutrema salsugineum HOM05D004188 ORTHO05D004445 5.7e-07 58.9 153 39.9
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 5.7e-07 58.9 46 63.0
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 5.7e-07 58.9 41 63.4
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 7.5e-07 58.5 140 41.4
MBI10_g41700_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 9.8e-07 58.2 42 66.7
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 1.7e-06 57.4 123 41.5
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 1.7e-06 57.4 64 48.4
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 2.2e-06 57.0 62 50.0
QL08p056015 Quercus lobata HOM05D007562 ORTHO05D009721 2.2e-06 57.0 42 61.9
Medtr2g094170 Medicago truncatula HOM05D004188 ORTHO05D004445 3.7e-06 56.2 69 44.9
Lsat_1_v5_gn_2_98481 Lactuca sativa HOM05D004188 ORTHO05D004445 4.9e-06 55.8 166 31.9
THA.LOC104799503 Tarenaya hassleriana HOM05D004188 ORTHO05D004445 6.3e-06 55.5 92 43.5
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 8.3e-06 55.1 42 59.5


User provided reference genes

Program Settings