Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 8.6e-96 353.6 173 100.0
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 1.4e-93 346.3 169 100.0
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 1.4e-93 346.3 173 97.7
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 3.0e-88 328.6 169 94.7
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 3.6e-86 321.6 172 87.8
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 3.9e-80 301.6 171 83.6
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 8.7e-80 300.4 169 84.0
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 8.7e-80 300.4 170 82.9
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.5e-79 299.7 165 86.7
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 2.5e-79 298.9 169 84.0
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 5.6e-79 297.7 169 83.4
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 5.6e-79 297.7 170 81.8
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 3.6e-78 295.0 170 82.4
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 4.8e-78 294.7 170 81.2
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 6.2e-78 294.3 170 81.8
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 2.4e-77 292.4 170 81.8
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 4.0e-77 291.6 146 95.9
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 5.3e-77 291.2 170 80.0
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 5.3e-77 291.2 165 84.2
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 6.9e-77 290.8 166 83.1
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 1.5e-76 289.7 168 81.5
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.0e-76 289.3 170 80.0
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 2.6e-76 288.9 169 80.5
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 2.6e-76 288.9 171 79.5
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 4.4e-76 288.1 168 81.0
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 5.8e-76 287.7 170 79.4
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 7.6e-76 287.3 166 80.7
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 1.3e-75 286.6 168 80.4
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 1.3e-75 286.6 169 81.1
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 1.3e-75 286.6 165 81.8
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 1.7e-75 286.2 170 80.6
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.7e-75 286.2 168 80.4
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 1.7e-75 286.2 168 80.4
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 1.7e-75 286.2 165 81.8
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 2.2e-75 285.8 169 79.9
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 2.2e-75 285.8 166 80.7
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 3.8e-75 285.0 169 80.5
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 4.9e-75 284.6 170 79.4
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 6.4e-75 284.3 167 79.0
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 8.4e-75 283.9 170 78.8
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 8.4e-75 283.9 174 79.3
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.1e-74 283.5 168 79.8
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 1.1e-74 283.5 170 79.4
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.4e-74 283.1 168 80.4
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.4e-74 283.1 168 79.8
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 1.9e-74 282.7 164 81.1
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.4e-74 282.3 165 81.2
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 3.2e-74 282.0 165 81.8
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 3.2e-74 282.0 171 78.4
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 4.2e-74 281.6 170 78.8
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 5.4e-74 281.2 168 79.2
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 5.4e-74 281.2 166 78.9
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 7.1e-74 280.8 170 79.4
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 9.3e-74 280.4 168 78.6
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 1.6e-73 279.6 168 77.4
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 2.1e-73 279.3 169 78.1
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.1e-73 279.3 171 77.8
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 2.1e-73 279.3 171 77.8
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 3.5e-73 278.5 168 78.6
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.0e-72 276.9 167 77.8
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 1.3e-72 276.6 164 78.7
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 2.3e-72 275.8 169 75.7
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 3.0e-72 275.4 165 79.4
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 6.6e-72 274.2 164 79.3
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.1e-71 273.5 168 78.6
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 1.5e-71 273.1 169 76.3
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 1.5e-71 273.1 167 78.4
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 1.9e-71 272.7 167 77.8
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 1.9e-71 272.7 167 77.8
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 1.9e-71 272.7 167 77.8
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.9e-71 272.7 167 77.2
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 2.5e-71 272.3 168 79.2
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 2.5e-71 272.3 164 79.9
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 2.5e-71 272.3 164 79.9
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 4.3e-71 271.6 168 76.8
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 4.3e-71 271.6 168 74.4
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 5.6e-71 271.2 164 79.3
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 2.1e-70 269.2 168 77.4
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 2.8e-70 268.9 169 78.1
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 2.8e-70 268.9 195 68.7
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 4.8e-70 268.1 165 78.2
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 1.1e-69 266.9 164 78.0
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 1.1e-69 266.9 164 78.0
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.4e-69 266.5 166 73.5
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.8e-69 266.2 169 74.0
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 2.4e-69 265.8 164 78.0
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 2.4e-69 265.8 155 81.3
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 7.1e-66 254.2 209 64.1
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 2.7e-65 252.3 174 71.8
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.0e-64 248.8 169 72.2
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 2.1e-62 242.7 165 69.1
Actinidia07225 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.1e-61 240.4 174 70.7
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 6.9e-61 237.7 170 64.7
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 3.2e-58 228.8 163 67.5
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 4.2e-58 228.4 175 62.3
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 6.0e-57 224.6 152 75.7
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.3e-56 223.4 151 72.8
CDE08G1146 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 2.8e-54 215.7 167 64.7
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 4.5e-52 208.4 170 64.1
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 2.2e-51 206.1 121 81.0
Zm00001eb339600 Zea mays HOM05D006649 ORTHO05D008754 2.9e-51 205.7 131 74.0
Zm00001eb382760 Zea mays HOM05D006649 ORTHO05D008754 3.0e-48 195.7 130 71.5
Dinv29440 Davidia involucrata HOM05D006649 ORTHO05D008754 1.6e-46 189.9 110 81.8
Ah.15g095620 Amaranthus hybridus HOM05D006649 ORTHO05D008754 1.0e-43 180.6 118 72.0
Thhalv10002731m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.2e-43 179.5 114 73.7
AL5G22760 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 5.5e-42 174.9 114 71.9
AL5G22830 Arabidopsis lyrata HOM05D006649 ORTHO05D008754 1.6e-41 173.3 114 71.9
PRCOL_00004711 Prasinoderma coloniale HOM05D006649 ORTHO05D008754 4.3e-39 165.2 177 48.0
Cre14.g632767 Chlamydomonas reinhardtii HOM05D006649 ORTHO05D008754 4.8e-38 161.8 181 48.1
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 1.8e-37 159.8 95 81.1
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 1.8e-37 159.8 96 81.2
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 1.2e-36 157.1 103 73.8
SEGI_31986 Sequoiadendron giganteum HOM05D006649 ORTHO05D008754 1.5e-36 156.8 109 72.5
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 1.3e-22 110.5 158 39.9
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.5e-18 96.3 51 88.2
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 4.0e-16 89.0 50 82.0
Mapoly0054s0048 Marchantia polymorpha HOM05D006649 ORTHO05D023509 1.5e-15 87.0 167 30.5
CBR_g19487 Chara braunii HOM05D006649 ORTHO05D023509 1.1e-13 80.9 177 27.7
Pp3c1_29030 Physcomitrium patens HOM05D006649 ORTHO05D023509 7.0e-13 78.2 170 30.0
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.2e-12 77.4 67 58.2
AT3G44485 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 6.3e-06 55.1 60 48.3


User provided reference genes

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