Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 4.3e-245 850.9 430 100.0
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 1.1e-235 819.7 429 96.5
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 1.6e-207 726.1 439 84.7
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 3.5e-178 628.6 332 93.1
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 1.6e-167 593.2 347 85.0
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 4.7e-167 591.7 409 70.9
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 1.4e-166 590.1 441 70.1
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 2.3e-166 589.3 408 70.1
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 2.3e-166 589.3 440 66.1
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 1.5e-165 586.6 439 67.9
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 7.5e-165 584.3 438 67.6
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 1.3e-164 583.6 407 69.3
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 8.3e-164 580.9 408 69.4
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 1.1e-163 580.5 438 66.9
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 1.8e-163 579.7 408 68.9
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 2.4e-163 579.3 407 68.8
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 3.1e-163 578.9 404 70.0
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 3.1e-163 578.9 347 83.6
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 4.1e-163 578.6 410 68.5
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 2.0e-162 576.2 436 70.2
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 3.5e-162 575.5 438 65.3
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 4.5e-162 575.1 409 70.2
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 1.3e-161 573.5 417 66.4
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 6.5e-161 571.2 430 67.9
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 6.5e-161 571.2 403 68.7
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 6.5e-161 571.2 403 68.7
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 1.1e-160 570.5 407 69.0
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 1.9e-160 569.7 410 67.8
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 2.5e-160 569.3 415 66.0
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 4.2e-160 568.5 411 66.4
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 4.2e-160 568.5 413 66.8
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 1.2e-159 567.0 408 67.9
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 1.6e-159 566.6 405 67.7
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 2.7e-159 565.8 410 67.3
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 3.6e-159 565.5 406 68.0
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 3.6e-159 565.5 432 64.4
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 4.7e-159 565.1 408 68.1
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 1.8e-158 563.1 435 64.1
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 3.0e-158 562.4 411 66.4
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 4.0e-158 562.0 445 64.5
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.5e-157 560.1 410 65.9
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 1.5e-157 560.1 406 66.3
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 2.0e-157 559.7 409 65.0
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 2.6e-157 559.3 405 66.2
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.4e-157 558.9 407 68.1
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 7.5e-157 557.8 407 65.8
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 7.5e-157 557.8 424 65.3
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 7.5e-157 557.8 408 67.6
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 1.3e-156 557.0 405 67.7
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 2.2e-156 556.2 407 67.8
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 2.2e-156 556.2 407 64.9
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.7e-156 555.4 408 67.4
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 8.3e-156 554.3 407 65.6
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.8e-155 553.1 405 66.7
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 5.4e-155 551.6 403 67.2
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 7.0e-155 551.2 414 65.5
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.2e-154 550.4 481 59.5
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 2.0e-154 549.7 407 66.8
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 3.5e-154 548.9 411 64.2
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 1.7e-153 546.6 395 65.8
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 1.7e-153 546.6 410 64.4
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 2.3e-153 546.2 402 66.7
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 5.0e-153 545.0 443 63.0
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 5.0e-153 545.0 404 64.6
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 1.5e-152 543.5 400 66.8
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 2.1e-151 539.7 438 62.1
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 4.7e-151 538.5 437 61.6
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 9.8e-149 530.8 408 64.2
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 1.7e-148 530.0 360 72.2
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.1e-147 527.3 405 61.0
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.1e-147 527.3 463 59.8
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 1.4e-147 526.9 429 62.7
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.8e-147 526.6 432 58.3
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 2.4e-147 526.2 403 60.8
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 1.2e-146 523.9 410 62.7
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.2e-146 523.9 403 60.5
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.6e-146 523.5 423 59.8
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 1.3e-145 520.4 405 60.5
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.7e-145 520.0 400 60.5
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.7e-145 520.0 423 62.2
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 2.3e-145 519.6 402 60.7
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 2.9e-145 519.2 422 63.5
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 2.5e-144 516.2 402 59.7
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 7.3e-144 514.6 402 60.2
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 2.3e-142 509.6 401 59.4
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 3.1e-142 509.2 402 59.0
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 1.5e-141 506.9 447 58.2
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 2.3e-137 493.0 439 58.1
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 1.5e-136 490.3 398 58.5
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 2.8e-135 486.1 319 71.8
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 3.6e-135 485.7 398 58.0
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 8.9e-134 481.1 361 65.9
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.9e-132 476.1 357 63.3
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 7.8e-130 468.0 319 69.3
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 5.1e-129 465.3 485 48.7
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 2.6e-125 453.0 354 60.2
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 4.9e-124 448.7 320 67.2
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 1.9e-120 436.8 417 53.5
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 3.8e-116 422.5 313 66.1
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 1.4e-115 420.6 209 99.0
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 1.5e-112 410.6 287 67.6
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 5.6e-112 408.7 296 64.9
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 1.5e-104 384.0 351 53.0
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 7.3e-104 381.7 275 66.9
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 9.0e-102 374.8 436 50.9
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 3.4e-101 372.9 280 65.7
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 1.2e-98 364.4 369 48.5
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 3.1e-94 349.7 361 48.8
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 4.2e-91 339.3 294 54.1
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 7.1e-91 338.6 326 54.9
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 1.3e-87 327.8 288 58.3
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 3.8e-84 316.2 243 63.4
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 9.3e-83 311.6 316 50.0
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 3.9e-81 306.2 327 51.4
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 1.1e-80 304.7 294 52.0
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 1.7e-71 274.2 261 51.3
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 1.4e-70 271.2 158 80.4
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 7.2e-67 258.8 263 49.0
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 6.1e-66 255.8 193 61.7
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 8.8e-57 225.3 231 49.8
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 4.1e-54 216.5 167 62.3
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 3.7e-47 193.4 144 64.6
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 9.1e-38 162.2 122 63.1
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 1.2e-37 161.8 282 34.8
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 7.7e-37 159.1 146 70.5
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 1.1e-35 155.2 116 62.1
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 8.0e-26 122.5 92 71.7
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 2.8e-18 97.4 217 33.6
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 2.3e-17 94.4 62 71.0
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 4.3e-11 73.6 45 73.3


User provided reference genes

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