Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g019240 Solanum pennellii HOM05D008041 ORTHO05D000385 1.5e-136 489.6 252 100.0
Sopen08g013620 Solanum pennellii HOM05D008041 ORTHO05D000385 1.4e-65 253.8 203 71.4
PGSC0003DMG400043070 Solanum tuberosum HOM05D030601 ORTHO05D000385 2.0e-48 196.8 205 58.0
PGSC0003DMG400034515 Solanum tuberosum HOM05D008041 ORTHO05D000385 8.0e-42 174.9 195 53.8
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 1.2e-40 171.0 245 42.9
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 1.2e-40 171.0 245 42.9
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 1.2e-40 171.0 245 42.9
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 3.4e-40 169.5 245 42.4
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 3.4e-40 169.5 245 42.4
Solyc10g018790.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.4e-40 169.1 139 66.2
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 4.4e-40 169.1 245 42.9
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 5.7e-40 168.7 245 42.9
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 2.2e-39 166.8 245 42.0
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.8e-39 165.6 245 42.9
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.1e-38 162.5 239 42.3
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 3.5e-37 159.5 251 41.4
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 9.5e-35 151.4 143 55.9
Sopen12g014810 Solanum pennellii HOM05D008041 ORTHO05D000385 1.4e-33 147.5 143 55.9
Sopen10g012240 Solanum pennellii HOM05D000107 ORTHO05D000385 3.4e-32 142.9 144 54.2
Sopen02g004250 Solanum pennellii HOM05D000004 ORTHO05D000385 7.5e-32 141.7 140 55.0
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.5e-27 127.5 181 41.4
Sopen08g019920 Solanum pennellii HOM05D008041 ORTHO05D000385 8.0e-26 121.7 105 61.9
Sopen10g011660 Solanum pennellii HOM05D000014 ORTHO05D000016 1.0e-25 121.3 79 77.2
Sopen02g007300 Solanum pennellii HOM05D002469 ORTHO05D000385 3.1e-25 119.8 138 56.5
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 2.9e-23 113.2 223 33.6
Sopen10g008660 Solanum pennellii HOM05D008041 ORTHO05D000385 1.3e-20 104.4 68 82.4
Sopen08g007140 Solanum pennellii HOM05D000107 ORTHO05D000570 8.6e-20 101.7 101 51.5
Sopen04g010730 Solanum pennellii HOM05D008041 ORTHO05D000385 1.1e-19 101.3 211 33.6
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.5e-19 100.9 226 32.7
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 7.3e-19 98.6 252 27.4
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 1.6e-18 97.4 252 27.0
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 1.6e-18 97.4 252 27.0
Solyc11g020843.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.6e-18 97.4 107 45.8
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 2.1e-18 97.1 252 27.0
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-18 96.7 252 27.0
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 4.7e-18 95.9 252 27.0
Solyc08g016677.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.7e-18 95.9 126 43.7
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-17 94.4 219 28.3
Solyc01g034040.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.4e-17 94.4 181 35.9
Sopen10g021280 Solanum pennellii HOM05D008041 ORTHO05D000385 3.1e-17 93.2 167 38.3
Sopen03g027000 Solanum pennellii HOM05D008041 ORTHO05D000385 6.8e-17 92.0 75 64.0
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.4e-16 89.7 219 27.9
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.8e-16 89.0 219 27.4
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.3e-15 85.1 189 29.1
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 8.3e-15 85.1 137 40.1
DCAR_032376 Daucus carota HOM05D013476 ORTHO05D012368 2.1e-13 80.5 259 23.6
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 3.5e-13 79.7 226 26.5
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-13 79.3 234 24.8
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 4.6e-13 79.3 263 25.5
PGSC0003DMG400046273 Solanum tuberosum HOM05D008041 ORTHO05D000385 4.6e-13 79.3 195 32.8
EL10Ac7g17419 Beta vulgaris HOM05D004615 ORTHO05D000385 6.0e-13 79.0 140 30.0
EL10Ac2g02989 Beta vulgaris HOM05D004615 ORTHO05D000385 7.8e-13 78.6 214 27.1
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.8e-13 78.6 246 24.8
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 7.8e-13 78.6 263 25.5
AUR62014273 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.0e-12 78.2 168 30.4
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 1.0e-12 78.2 139 33.1
EL10Ac5g11873 Beta vulgaris HOM05D004615 ORTHO05D000385 1.3e-12 77.8 140 31.4
Solyc01g016416.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.3e-12 77.8 66 60.6
EL10Ac1g01843 Beta vulgaris HOM05D009343 ORTHO05D011970 3.0e-12 76.6 164 31.1
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 5.1e-12 75.9 139 33.1
EL10Ac7g17625 Beta vulgaris HOM05D004615 ORTHO05D000385 1.1e-11 74.7 144 30.6
HanXRQChr02g0040071 Helianthus annuus HOM05D004615 ORTHO05D000385 1.1e-11 74.7 139 32.4
Sopen03g016060 Solanum pennellii HOM05D008041 ORTHO05D000385 2.5e-11 73.6 61 60.7
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 3.3e-11 73.2 176 28.4
EL10Ac2g03424 Beta vulgaris HOM05D004615 ORTHO05D000385 3.3e-11 73.2 166 31.9
EL10Ac8g18984 Beta vulgaris HOM05D010065 ORTHO05D000385 3.3e-11 73.2 143 35.7
AUR62007689 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-11 73.2 102 34.3
EL10Ac1g02022 Beta vulgaris HOM05D004615 ORTHO05D000385 4.3e-11 72.8 142 33.1
AUR62042361 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.6e-11 72.4 128 33.6
EL10Ac3g06149 Beta vulgaris HOM05D004615 ORTHO05D000385 7.3e-11 72.0 137 34.3
EL10Ac9g21235 Beta vulgaris HOM05D004615 ORTHO05D000385 7.3e-11 72.0 137 34.3
AUR62044017 Chenopodium quinoa HOM05D004615 ORTHO05D000062 7.3e-11 72.0 163 29.4
Hund15079 Selenicereus undatus HOM05D020107 ORTHO05D000385 7.3e-11 72.0 106 38.7
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.2e-10 71.2 240 26.2
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 1.6e-10 70.9 138 31.2
DCAR_001516 Daucus carota HOM05D004615 ORTHO05D000385 2.8e-10 70.1 138 32.6
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 2.8e-10 70.1 230 23.9
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 2.8e-10 70.1 230 23.9
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.7e-10 69.3 129 34.9
Sopen04g018890 Solanum pennellii HOM05D007930 ORTHO05D007166 1.4e-09 67.8 209 25.8
AUR62040143 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-09 67.0 97 33.0
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 3.1e-09 66.6 213 28.2
EL10Ac2g03160 Beta vulgaris HOM05D004615 ORTHO05D000385 4.0e-09 66.2 142 25.4
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 6.8e-09 65.5 150 29.3
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 8.9e-09 65.1 169 27.8
AUR62031856 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.2e-08 64.7 225 25.3
DCAR_029772 Daucus carota HOM05D004615 ORTHO05D000385 1.2e-08 64.7 103 32.0
Atru.chr6.1726 Acer truncatum HOM05D001309 ORTHO05D000385 2.6e-08 63.5 209 28.7
EL10Ac6g14405 Beta vulgaris HOM05D004615 ORTHO05D000385 2.6e-08 63.5 111 32.4
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.6e-08 63.5 121 35.5
Solyc03g063357.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.4e-08 63.2 64 54.7
EL10Ac9g22619 Beta vulgaris HOM05D004615 ORTHO05D000385 4.4e-08 62.8 133 29.3
Peaxi162Scf00085g00199 Petunia axillaris HOM05D003120 ORTHO05D003568 4.4e-08 62.8 82 42.7
Peaxi162Scf00250g00511 Petunia axillaris HOM05D003120 ORTHO05D003568 4.4e-08 62.8 82 42.7
Peaxi162Scf00524g00083 Petunia axillaris HOM05D003120 ORTHO05D003568 4.4e-08 62.8 82 42.7
Peaxi162Scf02251g00003 Petunia axillaris HOM05D003120 ORTHO05D003568 4.4e-08 62.8 82 42.7
Psat1g098040 Pisum sativum HOM05D009811 ORTHO05D007166 4.4e-08 62.8 137 29.9
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 4.4e-08 62.8 125 33.6
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.6e-08 62.0 204 24.5
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 7.6e-08 62.0 140 29.3
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 9.9e-08 61.6 137 29.9
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.9e-08 61.6 123 30.9
TWI36G1730 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 9.9e-08 61.6 125 32.8
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-07 61.2 137 28.5
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 1.3e-07 61.2 244 22.1
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.7e-07 60.8 209 24.4
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 2.2e-07 60.5 153 30.7
Peaxi162Scf00091g00169 Petunia axillaris HOM05D003120 ORTHO05D003568 2.2e-07 60.5 82 41.5
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 2.9e-07 60.1 152 30.3
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.9e-07 60.1 125 32.0
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 3.7e-07 59.7 221 24.4
Solyc08g150130.1 Solanum lycopersicum HOM05D004615 ORTHO05D000385 4.9e-07 59.3 60 51.7
Sopen07g008330 Solanum pennellii HOM05D007930 ORTHO05D007166 4.9e-07 59.3 129 28.7
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 6.4e-07 58.9 154 30.5
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 6.4e-07 58.9 154 30.5
AUR62034983 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.4e-07 58.9 199 24.1
Peaxi162Scf01480g00009 Petunia axillaris HOM05D003120 ORTHO05D003568 6.4e-07 58.9 82 40.2
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 6.4e-07 58.9 220 22.7
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 8.3e-07 58.5 140 30.7
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 8.3e-07 58.5 124 34.7
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 8.3e-07 58.5 136 29.4
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.1e-06 58.2 137 28.5
Solyc10g018713.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.1e-06 58.2 67 43.3
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 1.1e-06 58.2 143 31.5
TWI59G0531 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 1.1e-06 58.2 120 34.2
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 1.9e-06 57.4 154 29.2
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 2.4e-06 57.0 181 25.4
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 2.4e-06 57.0 100 31.0
Nitab4.5_0008635g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 3.2e-06 56.6 124 29.0
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 3.2e-06 56.6 116 32.8
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 5.4e-06 55.8 128 31.2
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 5.4e-06 55.8 141 29.1
BraA06t25453Z Brassica rapa HOM05D008309 ORTHO05D010308 7.1e-06 55.5 122 32.8
AUR62027501 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.1e-06 55.5 96 31.2
Peaxi162Scf00878g00111 Petunia axillaris HOM05D003120 ORTHO05D003568 7.1e-06 55.5 107 35.5
TWI73G0990 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 7.1e-06 55.5 113 34.5
Atru.chr1.767 Acer truncatum HOM05D001309 ORTHO05D000385 9.2e-06 55.1 238 26.1


User provided reference genes

Program Settings