Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g017960 Solanum pennellii HOM05D002047 ORTHO05D008561 2.5e-112 408.7 193 100.0
Sopen05g014240 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-106 389.8 193 94.8
Sopen01g017450 Solanum pennellii HOM05D002047 ORTHO05D001422 1.3e-105 386.3 193 94.8
PGSC0003DMG400016492 Solanum tuberosum HOM05D002047 ORTHO05D001422 1.0e-89 333.6 192 81.2
PGSC0003DMG400008668 Solanum tuberosum HOM05D022866 ORTHO05D001422 1.2e-32 144.1 92 72.8
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-30 137.5 166 43.4
Sopen08g013060 Solanum pennellii HOM05D002047 ORTHO05D001422 1.4e-30 137.1 169 42.0
Sopen04g020150 Solanum pennellii HOM05D002047 ORTHO05D001422 1.8e-30 136.7 166 43.4
Sopen02g012430 Solanum pennellii HOM05D002047 ORTHO05D001422 2.4e-30 136.3 166 43.4
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 9.2e-30 134.4 166 43.4
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 1.6e-29 133.7 166 42.8
Sopen08g008690 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-29 132.9 166 42.2
Sopen03g019350 Solanum pennellii HOM05D002047 ORTHO05D001422 3.5e-29 132.5 166 42.2
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 2.3e-28 129.8 150 44.0
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 2.5e-27 126.3 150 42.0
Sopen01g005990 Solanum pennellii HOM05D002047 ORTHO05D001422 1.0e-25 120.9 147 43.5
Sopen05g013180 Solanum pennellii HOM05D002047 ORTHO05D001422 1.0e-25 120.9 166 39.2
Sopen05g022180 Solanum pennellii HOM05D002047 ORTHO05D001422 2.3e-25 119.8 166 39.2
Sopen05g009810 Solanum pennellii HOM05D002047 ORTHO05D001422 8.9e-25 117.9 167 38.9
Sopen01g005980 Solanum pennellii HOM05D002047 ORTHO05D001422 3.4e-24 115.9 141 43.3
Sopen05g012170 Solanum pennellii HOM05D002047 ORTHO05D001422 5.8e-24 115.2 162 38.9
Sopen05g015790 Solanum pennellii HOM05D002047 ORTHO05D001422 7.5e-24 114.8 179 38.0
Sopen01g006870 Solanum pennellii HOM05D002047 ORTHO05D001422 9.8e-24 114.4 166 37.3
Sopen06g007040 Solanum pennellii HOM05D002047 ORTHO05D001422 2.9e-23 112.8 149 38.9
Sopen02g002190 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-22 110.9 166 37.3
Sopen09g022420 Solanum pennellii HOM05D002047 ORTHO05D001422 1.1e-22 110.9 147 42.2
Sopen01g024350 Solanum pennellii HOM05D000004 ORTHO05D001422 6.6e-20 101.7 122 40.2
Sopen12g014340 Solanum pennellii HOM05D000004 ORTHO05D000034 1.9e-19 100.1 44 100.0
PGSC0003DMG400032786 Solanum tuberosum HOM05D002047 ORTHO05D001422 4.3e-19 99.0 131 40.5
Sopen06g010680 Solanum pennellii HOM05D002047 ORTHO05D001422 2.8e-18 96.3 149 36.2
Sopen12g014280 Solanum pennellii HOM05D000182 ORTHO05D001422 1.8e-17 93.6 142 38.0
Sopen00g005910 Solanum pennellii HOM05D002047 ORTHO05D001422 2.2e-15 86.7 84 50.0
Sopen08g007700 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-15 85.1 99 42.4
Sopen07g005440 Solanum pennellii HOM05D010031 ORTHO05D012898 9.5e-11 71.2 150 28.7
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-10 70.5 138 31.9
Nitab4.5_0011116g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.6e-10 70.5 133 34.6
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 2.1e-10 70.1 96 35.4
Sopen03g025980 Solanum pennellii HOM05D010031 ORTHO05D012898 3.6e-10 69.3 140 31.4
Thecc.06G098800 Theobroma cacao HOM05D002881 ORTHO05D010329 6.2e-10 68.6 114 25.4
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 6.2e-10 68.6 114 25.4
Sopen01g011230 Solanum pennellii HOM05D000047 ORTHO05D003210 1.1e-09 67.8 122 29.5
Sopen01g041930 Solanum pennellii HOM05D007487 ORTHO05D008561 1.8e-09 67.0 150 26.0
Nitab4.5_0001785g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.3e-09 66.6 133 33.1
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 2.3e-09 66.6 101 37.6
Sopen01g015110 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-09 66.6 136 27.2
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 2.3e-09 66.6 101 37.6
Thecc.03G050000 Theobroma cacao HOM05D002881 ORTHO05D010329 2.3e-09 66.6 103 27.2
Nitab4.5_0010052g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.1e-09 66.2 129 30.2
Sopen04g014050 Solanum pennellii HOM05D000014 ORTHO05D000016 3.1e-09 66.2 150 26.0
Sopen06g012970 Solanum pennellii HOM05D007487 ORTHO05D008561 3.1e-09 66.2 136 27.2
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 4.0e-09 65.9 101 36.6
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 4.0e-09 65.9 101 36.6
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 4.0e-09 65.9 101 37.6
Sopen03g017550 Solanum pennellii HOM05D010031 ORTHO05D012898 5.2e-09 65.5 118 30.5
PGSC0003DMG400021226 Solanum tuberosum HOM05D007487 ORTHO05D012898 6.8e-09 65.1 138 24.6
Nitab4.5_0002612g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.9e-09 64.7 116 31.9
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 8.9e-09 64.7 136 30.1
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 8.9e-09 64.7 100 32.0
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.2e-08 64.3 100 32.0
Sopen01g024410 Solanum pennellii HOM05D010031 ORTHO05D012898 1.2e-08 64.3 151 27.8
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-08 63.9 134 31.3
Sopen10g005430 Solanum pennellii HOM05D010031 ORTHO05D012898 2.0e-08 63.5 120 26.7
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.6e-08 63.2 138 31.2
Nitab4.5_0013909g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.6e-08 63.2 132 32.6
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 2.6e-08 63.2 101 34.7
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 2.6e-08 63.2 93 40.9
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 3.4e-08 62.8 101 35.6
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.4e-08 62.4 128 32.8
Nitab4.5_0001560g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.4e-08 62.4 131 29.8
Sopen04g022380 Solanum pennellii HOM05D007487 ORTHO05D008561 4.4e-08 62.4 138 26.1
Sopen05g014630 Solanum pennellii HOM05D007487 ORTHO05D008561 4.4e-08 62.4 136 25.0
Sopen06g009410 Solanum pennellii HOM05D007487 ORTHO05D008561 4.4e-08 62.4 140 25.0
Sopen10g010870 Solanum pennellii HOM05D010031 ORTHO05D012898 4.4e-08 62.4 106 31.1
PGSC0003DMG400047294 Solanum tuberosum HOM05D007487 ORTHO05D008561 4.4e-08 62.4 97 32.0
Nitab4.5_0019913g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.8e-08 62.0 132 33.3
Sopen03g024880 Solanum pennellii HOM05D007487 ORTHO05D008561 5.8e-08 62.0 140 25.7
Sopen01g019640 Solanum pennellii HOM05D000047 ORTHO05D000044 7.6e-08 61.6 136 25.7
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 7.6e-08 61.6 101 35.6
Sopen03g025020 Solanum pennellii HOM05D007487 ORTHO05D008561 7.6e-08 61.6 139 25.9
Sopen07g015780 Solanum pennellii HOM05D007487 ORTHO05D008561 7.6e-08 61.6 136 25.7
COL.COLO4_37634 Corchorus olitorius HOM05D035067 ORTHO05D010329 9.9e-08 61.2 93 32.3
Nitab4.5_0004848g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.9e-08 61.2 132 32.6
Sopen07g020190 Solanum pennellii HOM05D000047 ORTHO05D000044 9.9e-08 61.2 122 27.9
Sopen12g018750 Solanum pennellii HOM05D007487 ORTHO05D008561 9.9e-08 61.2 139 25.9
Duzib235G1144 Durio zibethinus HOM05D002881 ORTHO05D002983 1.7e-07 60.5 122 23.0
Nitab4.5_0001155g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-07 60.5 126 29.4
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.7e-07 60.5 136 30.1
Nitab4.5_0002662g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-07 60.5 132 33.3
Nitab4.5_0007649g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.7e-07 60.5 127 30.7
Sopen01g015240 Solanum pennellii HOM05D007487 ORTHO05D008561 1.7e-07 60.5 140 25.0
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 1.7e-07 60.5 126 28.6
PGSC0003DMG400004361 Solanum tuberosum HOM05D002047 ORTHO05D001422 1.7e-07 60.5 56 44.6
Nitab4.5_0000340g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-07 60.1 131 32.8
Nitab4.5_0003148g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.2e-07 60.1 130 27.7
PGSC0003DMG400004489 Solanum tuberosum HOM05D022866 ORTHO05D001422 2.2e-07 60.1 31 77.4
Nitab4.5_0010465g0010 Nicotiana tabacum HOM05D007487 ORTHO05D001422 2.9e-07 59.7 100 28.0
Sopen01g022570 Solanum pennellii HOM05D010031 ORTHO05D012898 2.9e-07 59.7 115 29.6
Sopen01g024220 Solanum pennellii HOM05D007487 ORTHO05D008561 2.9e-07 59.7 98 29.6
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 2.9e-07 59.7 128 28.9
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-07 58.9 136 28.7
Nitab4.5_0003901g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-07 58.9 76 35.5
Nitab4.5_0003979g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-07 58.9 83 34.9
Nitab4.5_0010159g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-07 58.9 137 27.0
Sopen07g007690 Solanum pennellii HOM05D007487 ORTHO05D008561 4.9e-07 58.9 126 25.4
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.4e-07 58.5 79 36.7
Sopen01g024270 Solanum pennellii HOM05D002047 ORTHO05D001422 6.4e-07 58.5 58 46.6
Sopen02g010520 Solanum pennellii HOM05D007487 ORTHO05D008561 6.4e-07 58.5 125 26.4
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.4e-07 58.2 118 29.7
Nitab4.5_0000596g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.4e-07 58.2 142 31.7
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.4e-07 58.2 73 35.6
Nitab4.5_0001774g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.4e-07 58.2 137 27.7
Sopen03g019160 Solanum pennellii HOM05D000047 ORTHO05D000044 8.4e-07 58.2 87 34.5
Sopen07g020220 Solanum pennellii HOM05D010031 ORTHO05D012898 8.4e-07 58.2 95 33.7
Sopen09g019170 Solanum pennellii HOM05D007487 ORTHO05D008561 8.4e-07 58.2 136 23.5
Sopen09g026260 Solanum pennellii HOM05D007487 ORTHO05D008561 8.4e-07 58.2 107 31.8
Sopen12g016430 Solanum pennellii HOM05D007487 ORTHO05D008561 8.4e-07 58.2 136 25.7
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.1e-06 57.8 73 35.6
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-06 57.4 123 29.3
Nitab4.5_0000468g0160 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-06 57.4 133 31.6
Nitab4.5_0002149g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-06 57.4 129 29.5
Nitab4.5_0002542g0100 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-06 57.4 68 38.2
Nitab4.5_0005506g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 1.4e-06 57.4 186 22.6
Sopen06g005580 Solanum pennellii HOM05D007487 ORTHO05D008561 1.4e-06 57.4 139 24.5
Sopen11g009850 Solanum pennellii HOM05D007487 ORTHO05D008561 1.4e-06 57.4 120 27.5
Thecc.04G051200 Theobroma cacao HOM05D002881 ORTHO05D002983 1.4e-06 57.4 114 22.8
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 1.9e-06 57.0 98 28.6
Dinv18789 Davidia involucrata HOM05D012821 ORTHO05D001422 2.4e-06 56.6 83 34.9
Nitab4.5_0002702g0010 Nicotiana tabacum HOM05D008695 ORTHO05D011334 2.4e-06 56.6 82 34.1
Sopen04g012100 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-06 56.6 82 32.9
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 2.4e-06 56.6 106 30.2
Sopen05g025210 Solanum pennellii HOM05D007487 ORTHO05D008561 2.4e-06 56.6 98 29.6
Sopen10g014800 Solanum pennellii HOM05D007487 ORTHO05D008561 2.4e-06 56.6 140 24.3
Sopen12g017850 Solanum pennellii HOM05D007487 ORTHO05D008561 2.4e-06 56.6 110 28.2
Nitab4.5_0000522g0120 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.2e-06 56.2 73 34.2
Nitab4.5_0001555g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.2e-06 56.2 103 33.0
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.2e-06 56.2 73 34.2
Sopen00g004230 Solanum pennellii HOM05D000047 ORTHO05D000589 3.2e-06 56.2 100 33.0
Sopen05g018100 Solanum pennellii HOM05D007487 ORTHO05D008561 3.2e-06 56.2 129 24.8
Sopen10g013060 Solanum pennellii HOM05D007487 ORTHO05D008561 3.2e-06 56.2 136 25.0
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 3.2e-06 56.2 74 39.2
Nitab4.5_0000427g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-06 55.8 76 34.2
Nitab4.5_0005096g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-06 55.8 128 28.9
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.1e-06 55.8 126 28.6
Nitab4.5_0010859g0020 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-06 55.8 136 27.9
Sopen02g001670 Solanum pennellii HOM05D007487 ORTHO05D008561 4.1e-06 55.8 126 26.2
Nitab4.5_0000361g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.4e-06 55.5 96 29.2
Sopen03g016130 Solanum pennellii HOM05D000047 ORTHO05D000044 5.4e-06 55.5 99 37.4
Sopen09g022070 Solanum pennellii HOM05D000047 ORTHO05D001422 5.4e-06 55.5 72 38.9
Sopen12g011370 Solanum pennellii HOM05D007487 ORTHO05D008561 5.4e-06 55.5 102 27.5
COL.COLO4_08519 Corchorus olitorius HOM05D035067 ORTHO05D010329 7.1e-06 55.1 93 31.2
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 7.1e-06 55.1 81 33.3
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 7.1e-06 55.1 73 34.2
Nitab4.5_0001619g0130 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.2e-06 54.7 128 27.3
Nitab4.5_0005513g0020 Nicotiana tabacum HOM05D008440 ORTHO05D006375 9.2e-06 54.7 60 41.7
Sopen03g016330 Solanum pennellii HOM05D010031 ORTHO05D008561 9.2e-06 54.7 96 26.0
Sopen06g006310 Solanum pennellii HOM05D007487 ORTHO05D008561 9.2e-06 54.7 97 27.8
Sopen10g022490 Solanum pennellii HOM05D007487 ORTHO05D008561 9.2e-06 54.7 139 22.3


User provided reference genes

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