Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 2.5e-133 478.8 243 100.0
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 3.6e-108 395.2 242 83.1
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.3e-101 372.1 242 78.1
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.9e-97 359.0 242 75.6
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 6.4e-97 357.8 242 75.2
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 7.1e-96 354.4 242 75.2
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 9.3e-96 354.0 242 74.8
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.2e-95 353.6 234 76.5
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.5e-95 352.1 234 76.1
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 6.0e-95 351.3 238 74.8
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.0e-94 350.5 238 73.9
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 1.3e-94 350.1 242 73.1
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 2.3e-94 349.4 242 72.7
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 3.0e-94 349.0 238 74.4
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 5.1e-94 348.2 238 72.7
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 6.6e-94 347.8 238 73.5
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 6.6e-94 347.8 238 73.5
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 1.9e-93 346.3 238 72.7
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.9e-93 346.3 238 73.1
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 2.5e-93 345.9 238 73.9
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 5.6e-93 344.7 240 73.3
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 5.6e-93 344.7 242 72.3
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 7.3e-93 344.4 239 69.9
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 7.3e-93 344.4 238 72.7
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 7.3e-93 344.4 238 73.9
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 1.6e-92 343.2 238 72.3
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 3.6e-92 342.0 236 72.9
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.4e-91 340.1 242 72.3
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 2.4e-91 339.3 242 70.7
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 2.4e-91 339.3 243 70.4
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 3.1e-91 339.0 242 72.7
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 9.0e-91 337.4 243 70.0
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.2e-90 337.0 232 72.0
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.5e-90 336.7 244 71.7
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.5e-90 336.7 232 72.0
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.5e-90 336.7 235 71.1
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 2.0e-90 336.3 238 69.7
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 2.6e-90 335.9 232 71.6
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.6e-90 335.9 250 69.2
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.3e-89 333.6 242 70.2
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.3e-89 333.6 238 71.0
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 2.2e-89 332.8 238 69.3
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 2.2e-89 332.8 236 72.0
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.2e-89 332.8 236 68.6
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 2.2e-89 332.8 236 71.6
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.9e-89 332.4 232 70.3
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.9e-89 332.4 220 76.8
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.9e-89 332.4 238 69.3
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 3.8e-89 332.0 238 69.7
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 4.9e-89 331.6 230 71.3
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 4.9e-89 331.6 245 70.6
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 6.4e-89 331.3 242 69.8
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 8.4e-89 330.9 234 69.7
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 1.1e-88 330.5 242 70.7
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.4e-88 329.3 234 69.2
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 3.2e-88 328.9 246 67.5
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 5.4e-88 328.2 237 71.7
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 7.1e-88 327.8 272 64.7
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 9.3e-88 327.4 238 68.5
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 9.3e-88 327.4 242 69.8
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.6e-87 326.6 239 68.6
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.6e-87 326.6 239 68.6
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.6e-87 326.6 237 70.0
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.1e-87 326.2 234 71.4
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 3.5e-87 325.5 237 69.6
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 7.9e-87 324.3 236 68.6
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.8e-86 323.2 242 68.2
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.8e-86 323.2 242 68.2
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 2.3e-86 322.8 238 67.2
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.0e-86 322.4 242 68.2
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 5.1e-86 321.6 264 65.5
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 8.7e-86 320.9 233 67.4
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 8.7e-86 320.9 265 65.3
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 7.4e-85 317.8 239 68.2
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 3.7e-84 315.5 233 67.8
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 4.8e-84 315.1 243 67.5
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 4.8e-84 315.1 220 70.5
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 5.3e-83 311.6 222 72.5
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 5.3e-83 311.6 196 81.6
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 9.9e-82 307.4 238 65.5
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 1.3e-81 307.0 199 76.4
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 6.0e-79 298.1 261 60.9
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 6.0e-79 298.1 238 66.0
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 6.0e-79 298.1 274 59.1
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.0e-78 297.4 242 62.4
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 3.9e-78 295.4 235 63.4
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.1e-77 293.9 235 63.0
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 9.0e-75 284.3 242 63.6
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.6e-74 282.7 257 58.0
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 3.8e-73 278.9 241 57.3
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 8.4e-73 277.7 266 55.6
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 1.6e-71 273.5 209 66.5
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 4.6e-71 271.9 222 59.5
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.8e-70 270.0 237 59.5
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 1.4e-67 260.4 196 66.3
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 9.0e-67 257.7 158 78.5
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.6e-66 256.1 243 54.3
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.5e-66 255.4 278 54.3
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 5.9e-66 255.0 204 63.2
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.0e-65 254.2 297 48.5
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 2.9e-65 252.7 243 60.1
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.5e-61 239.6 159 72.3
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.4e-59 233.8 220 55.0
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.5e-58 230.3 222 52.3
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 2.0e-58 229.9 164 72.6
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.9e-56 223.4 196 62.8
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 4.2e-56 222.2 175 66.3
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 4.2e-56 222.2 175 66.3
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 9.4e-56 221.1 152 74.3
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.1e-55 219.9 225 49.8
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 5.1e-54 215.3 122 90.2
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.1e-48 197.6 196 57.7
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 1.9e-40 170.2 128 68.0
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 9.7e-37 157.9 91 86.8
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 5.9e-34 148.7 119 64.7
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 7.0e-27 125.2 163 44.8
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 1.3e-25 120.9 71 80.3
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 8.6e-25 118.2 69 79.7
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.4e-22 110.9 61 86.9
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.0e-22 109.8 93 65.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 1.1e-19 101.3 55 80.0
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 6.6e-17 92.0 98 54.1
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 2.6e-13 80.1 236 28.4
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 4.6e-10 69.3 65 60.0
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 2.3e-09 67.0 65 50.8


User provided reference genes

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